BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496869 Length=1417 Score E Sequences producing significant alignments: (Bits) Value AT5G67310.1 | Symbols: CYP81G1 | cytochrome P450, family 81, su... 730 0.0 AT5G67300.1 | Symbols: ATMYBR1, ATMYB44, MYBR1, MYB44 | myb dom... 730 0.0 > AT5G67310.1 | Symbols: CYP81G1 | cytochrome P450, family 81, subfamily G, polypeptide 1 | chr5:26855216-26856941 REVERSE LENGTH=1638 Length=1638 Score = 730 bits (395), Expect = 0.0 Identities = 491/537 (91%), Gaps = 7/537 (1%) Strand=Plus/Plus Query 882 GGAAGGTTTAATGAAACTGAAAACGGAAGTAAACAACGTTTCCG-TAGAAGGGCGTCTGT 940 ||||| ||||| |||||| ||||||||| ||||| | |||| || |||||||||| ||| Sbjct 1010 GGAAGTTTTAAGGAAACTCAAAACGGAACTAAACGAGGTTT-CGAAAGAAGGGCGTGTGT 1068 Query 941 TGGAGGAATCAGATACCGGCAAGTGTCCGTATCT-AACAAATGTGATCTCTGAAACACTC 999 | |||||||||||||| ||||||||||| ||||| ||| |||||||||||||| || || Sbjct 1069 TTGAGGAATCAGATACTGGCAAGTGTCCCTATCTCAAC-AATGTGATCTCTGAGACTCTT 1127 Query 1000 CGTTTGTATCCGGCAGCGCCGTTACTTGTCCCACACGCTTCATCCGCTGACTGTGAAGTC 1059 ||||||| |||||| ||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 1128 CGTTTGTTTCCGGCGGCGCCCTTACTTGTCCCACACGCTTCATCCACTGACTGTGAAGTC 1187 Query 1060 GCTGGATTTGACATTCCACGTGGCACCTGGTTATTTATCAATGCGTGGGCTATTCAAAGA 1119 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| Sbjct 1188 GCTGGATTTGACATTCCACGTCGCACCTGGCTATTTATCAATGCGTGGGCTATTCAGAGA 1247 Query 1120 GACCCGAAGGTATGGGATGATGACCCGGAAGCTTTCAAACCAGAGAGGTTTGAATCAGAG 1179 ||||| || |||| || |||||||| ||| ||||||||||||||||||||||||||||| Sbjct 1248 GACCCAAATGTAT-GG--GATGACCCAGAAACTTTCAAACCAGAGAGGTTTGAATCAGAG 1304 Query 1180 ACTCATCGTGGTAAGTATCTGCCTTTTGGAATCGGCAGAAGAGCATGTCCTGGTATGGGC 1239 || ||||||||||||| ||||||||| |||||||| || ||||||||||||||||||||| Sbjct 1305 ACCCATCGTGGTAAGTTTCTGCCTTTCGGAATCGGTAGGAGAGCATGTCCTGGTATGGGC 1364 Query 1240 CTGGCCCAACTTGTACTGAGCTTAGCTTTAGGCTCATTGATCCAGTGTTTTGATTGGGAG 1299 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1365 CTGGCCCAACTAGTACTGAGCTTAGCTTTAGGCTCATTGATCCAGTGTTTCGATTGGGAG 1424 Query 1300 AGAGACAATGACGTGGCAGTTGACATGTCGGAAGGAAGGGGTATTACCATGCCCAAAGCT 1359 |||||||||||||| || ||||||||||||||||||| |||| |||||||||||||| || Sbjct 1425 AGAGACAATGACGTTGCCGTTGACATGTCGGAAGGAAAGGGTCTTACCATGCCCAAATCT 1484 Query 1360 GTGCCTTTAGTTGCCAAATGCAAGTCTTTACCAATCCTGGACAAAGTTGTTCTTTAA 1416 |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 1485 GTGCCTTTAGTTGCCAAATGCAAGTCTTTACCAATCCTCGACAAACTTGTTCTTTAA 1541 Score = 682 bits (369), Expect = 0.0 Identities = 534/611 (87%), Gaps = 22/611 (4%) Strand=Plus/Plus Query 1 ATTGATTTGTCTCTCCTCGCTCTCATCGCCGGATTTATCACGGTGGCTTATCTTTTCCGA 60 |||||||||| ||| ||||||||||| |||||||| || | ||||| ||| |||||||| Sbjct 63 ATTGATTTGTTTCTACTCGCTCTCATGGCCGGATTCATTGCAGTGGCGTATGTTTTCCGA 122 Query 61 TCAAAGCAGAAGAAGAA--GA-AG--AATTTACTGCCAAG---TCCAGT-A--GGACACC 109 ||||||||||||||||| | | || | ||| | | ||| || | ||||||| Sbjct 123 TCAAAGCAGAAGAAGAATTTACCGCCAA-ATCCTG-TAGGTTTTCCGGTGATCGGACACC 180 Query 110 TACACCTTCTCAAAGAACCTGTTCACCGTTCCCTTCGTGACCTCTCTCGAAACCTCCGCA 169 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 181 TCCACCTTCTCAAAGAACCTGTTCACCGTTCCCTTCGTGACCTCTCTCGAAACCTCGGCA 240 Query 170 GCGACGTGTTTTTTCTACGCCTAGGTTCACGTCGAGCGGTTGTTGTGACGTCAGCTTCCG 229 |||||||||| |||| || ||||| || ||||||||||| ||||| ||||||||||| | Sbjct 241 TCGACGTGTTTATTCTCCGGCTAGGCTCTCGTCGAGCGGTGGTTGTAACGTCAGCTTCAG 300 Query 230 CTGCGGAGGAGTTCTTATCTCATG-AAAACGATGTCATCTTCGCCAACAGGCCTCTCGCT 288 |||||||||||||||||||||| | |||||||||| | ||||||||||||||||||||| Sbjct 301 CTGCGGAGGAGTTCTTATCTCA-GCAAAACGATGTTGTTTTCGCCAACAGGCCTCTCGCT 359 Query 289 AGTTTAACTGAATACATGGGTTACAACTGCACGATCGTTAGCGCAGCTCTGTACGGCGAA 348 | ||||||||||||||||||||||||| |||| | |||||| |||||| |||||| || Sbjct 360 ACTTTAACTGAATACATGGGTTACAACAACACGCTGGTTAGCACAGCTCCGTACGGGGAG 419 Query 349 CATTGGCGCAGACTCCGCCGTTTCTGCGCCGTAGAGATCTTCTCCGCCGCTTGTCTCAGA 408 ||||||||||||||||||||||||||||||||||| ||||| ||| ||||| |||||||| Sbjct 420 CATTGGCGCAGACTCCGCCGTTTCTGCGCCGTAGATATCTTGTCCACCGCTCGTCTCAGA 479 Query 409 GACTCTTCGGATATACGGAGAGACGAAGTGAGAGCTCTGCTTCGGAAGATCTACGTGGAA 468 |||| ||||||||||||||||||||||||||||||| || ||||||||||| |||||||| Sbjct 480 GACTTTTCGGATATACGGAGAGACGAAGTGAGAGCTATGATTCGGAAGATCAACGTGGAA 539 Query 469 CTGGTAACATCAGGAGGAAATGACTTTGTCAGATTGAAACTCCAGCCGTTGCTTTATGGA 528 ||||||||||||||||| | | | ||||||||||||||||||||||| |||||||| Sbjct 540 CTGGTAACATCAGGAGGCA--G--T--GTCAGATTGAAACTCCAGCCGTTTCTTTATGGG 593 Query 529 CTTACGTTTAACATCCTTATGAGCATAGTCGCCGGAAAACGAGAGGAAGACGAGGAAACG 588 ||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct 594 CTTACGTATAACATCCTAATGAGCATGGTCGCTGGAAAACGAGAGGAAGACGAGGAAACT 653 Query 589 AAGGAA-TTCG 598 |||||| |||| Sbjct 654 AAGGAAGTTCG 664 > AT5G67300.1 | Symbols: ATMYBR1, ATMYB44, MYBR1, MYB44 | myb domain protein r1 | chr5:26854022-26856006 FORWARD LENGTH=1985 Length=1985 Score = 730 bits (395), Expect = 0.0 Identities = 491/537 (91%), Gaps = 7/537 (1%) Strand=Plus/Minus Query 882 GGAAGGTTTAATGAAACTGAAAACGGAAGTAAACAACGTTTCCG-TAGAAGGGCGTCTGT 940 ||||| ||||| |||||| ||||||||| ||||| | |||| || |||||||||| ||| Sbjct 1823 GGAAGTTTTAAGGAAACTCAAAACGGAACTAAACGAGGTTT-CGAAAGAAGGGCGTGTGT 1765 Query 941 TGGAGGAATCAGATACCGGCAAGTGTCCGTATCT-AACAAATGTGATCTCTGAAACACTC 999 | |||||||||||||| ||||||||||| ||||| ||| |||||||||||||| || || Sbjct 1764 TTGAGGAATCAGATACTGGCAAGTGTCCCTATCTCAAC-AATGTGATCTCTGAGACTCTT 1706 Query 1000 CGTTTGTATCCGGCAGCGCCGTTACTTGTCCCACACGCTTCATCCGCTGACTGTGAAGTC 1059 ||||||| |||||| ||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 1705 CGTTTGTTTCCGGCGGCGCCCTTACTTGTCCCACACGCTTCATCCACTGACTGTGAAGTC 1646 Query 1060 GCTGGATTTGACATTCCACGTGGCACCTGGTTATTTATCAATGCGTGGGCTATTCAAAGA 1119 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| Sbjct 1645 GCTGGATTTGACATTCCACGTCGCACCTGGCTATTTATCAATGCGTGGGCTATTCAGAGA 1586 Query 1120 GACCCGAAGGTATGGGATGATGACCCGGAAGCTTTCAAACCAGAGAGGTTTGAATCAGAG 1179 ||||| || |||| || |||||||| ||| ||||||||||||||||||||||||||||| Sbjct 1585 GACCCAAATGTAT-GG--GATGACCCAGAAACTTTCAAACCAGAGAGGTTTGAATCAGAG 1529 Query 1180 ACTCATCGTGGTAAGTATCTGCCTTTTGGAATCGGCAGAAGAGCATGTCCTGGTATGGGC 1239 || ||||||||||||| ||||||||| |||||||| || ||||||||||||||||||||| Sbjct 1528 ACCCATCGTGGTAAGTTTCTGCCTTTCGGAATCGGTAGGAGAGCATGTCCTGGTATGGGC 1469 Query 1240 CTGGCCCAACTTGTACTGAGCTTAGCTTTAGGCTCATTGATCCAGTGTTTTGATTGGGAG 1299 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1468 CTGGCCCAACTAGTACTGAGCTTAGCTTTAGGCTCATTGATCCAGTGTTTCGATTGGGAG 1409 Query 1300 AGAGACAATGACGTGGCAGTTGACATGTCGGAAGGAAGGGGTATTACCATGCCCAAAGCT 1359 |||||||||||||| || ||||||||||||||||||| |||| |||||||||||||| || Sbjct 1408 AGAGACAATGACGTTGCCGTTGACATGTCGGAAGGAAAGGGTCTTACCATGCCCAAATCT 1349 Query 1360 GTGCCTTTAGTTGCCAAATGCAAGTCTTTACCAATCCTGGACAAAGTTGTTCTTTAA 1416 |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 1348 GTGCCTTTAGTTGCCAAATGCAAGTCTTTACCAATCCTCGACAAACTTGTTCTTTAA 1292 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69828958095 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5