BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg496993 Length=1446 Score E Sequences producing significant alignments: (Bits) Value AT5G66190.1 | Symbols: ATLFNR1, FNR1 | ferredoxin-NADP(+)-oxido... 2255 0.0 AT5G66180.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 261 1e-68 > AT5G66190.1 | Symbols: ATLFNR1, FNR1 | ferredoxin-NADP(+)-oxidoreductase 1 | chr5:26450964-26453199 REVERSE LENGTH=1509 Length=1509 Score = 2255 bits (1221), Expect = 0.0 Identities = 1401/1481 (95%), Gaps = 39/1481 (3%) Strand=Plus/Plus Query 1 AATAACTTATCCTGTGTAACACTTGGCCTCGCATTGCCCTTCACACAATCCACACACATC 60 ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 4 AATAACTTATCCTCTCTAACACTTGGCCTCACATTGCCCTTCACACAATCCACACACATC 63 Query 61 CAATCACAACCTCATCATATATCTCCCGCTAA-C-CTTTTTC--T--TC------ttttt 108 |||||||||||||||||||||||||||||||| | |||||| | || ||||| Sbjct 64 CAATCACAACCTCATCATATATCTCCCGCTAATCTTTTTTTCTTTGATCTTTTTTTTTTT 123 Query 109 --tt-tt-tttttttGACTTTGATC-GCCA-C----CA----------GTTCTTCTGATC 148 || || ||||||||||||||||| ||| | || ||||||||||| Sbjct 124 GCTTATTATTTTTTTGACTTTGATCTCCCATCAGTTCATCTTCTTCTTCTTCTTCTGATC 183 Query 149 AACCATGGCTGCTGCTATAAGTGCTGCAGTCTCTTTACCTTCCTCCAAGTCATCCTCTCT 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 184 AACCATGGCTGCTGCTATAAGTGCTGCAGTCTCTTTACCTTCCTCCAAGTCATCCTCTCT 243 Query 209 CCCCACCAAAACCTCCTCTGTATCCCCTCAAAGGATTTTCCTCAAGAAGAGCACACTGTG 268 || |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 244 CCTCACCAAAATCTCCTCTGTATCCCCTCAAAGGATTTTCCTCAAGAAGAGCACAGTGTG 303 Query 269 TTACAGGAGAAGAGTTGTGTCAGTGAAGGCTCAGGTGACAACAGATACTACCGAGGCACC 328 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 304 TTAC---AGAAGAGTTGTGTCAGTGAAGGCTCAGGTGACAACAGATACTACCGAGGCACC 360 Query 329 ACCAGTTAAAGTAGTCAAGGAGTCTAAGAAACAGGAAGAAGGGATTGTTGTCAACAAATT 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 ACCAGTTAAAGTAGTCAAGGAGTCTAAGAAACAGGAAGAAGGGATTGTTGTCAACAAATT 420 Query 389 CAAACCTAAGAACCCTTACACTGGTCGCTGCCTCTTGAACACCAAGATCACCGGCGATGA 448 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 421 CAAACCTAAGAACCCTTACACTGGTCGCTGCCTTTTGAACACCAAGATCACCGGTGATGA 480 Query 449 CGCTCCCGGTGAGACCTGGCACATTGTCTTCACCACCCAAGGTGAGATTCCGTATAGAGA 508 ||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 481 CGCTCCCGGTGAGACTTGGCACATTGTCTTCACCACCGAAGGTGAGGTTCCGTATAGAGA 540 Query 509 AGGGCAATCGATCGGAGTGATTCCTGAGGGAATTGACAAGAACGGGAAGCCGCACAAGCT 568 ||| |||||||| ||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 541 AGGACAATCGATAGGAGTGATTCCAGAGGGAATAGACAAGAACGGGAAGCCGCACAAGCT 600 Query 569 CAGGCTTTACTCTATCGCCAGTAGTGCCATTGGTGACTTTGGAGACTCCAAGACCGTTTC 628 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 601 CAGGCTTTACTCTATCGCGAGTAGTGCCATTGGTGACTTTGGAGACTCCAAGACCGTTTC 660 Query 629 TCTCTGTGTCAAGAGACTAGTTTACACAAATGATAGCGGAGAGATTGTTAAGGGGGTCTG 688 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 661 TCTCTGTGTCAAGAGACTAGTTTACACAAATGATGGCGGAGAGATTGTTAAGGGGGTCTG 720 Query 689 CTCCAACTTCTTGTGTGACTTGAGGCCGGGTGATGAAGCTAAGATCACTGGACCTGTTGG 748 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 721 CTCCAACTTCTTGTGTGACTTGAAGCCGGGTGATGAAGCTAAGATCACTGGACCTGTTGG 780 Query 749 GAAGGAAATGCTTATGCCAAAAGACCCTAATGCCACCATCATCATGCTTGGAACAGGAAC 808 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 781 CAAGGAAATGCTTATGCCAAAAGACCCCAATGCCACCATCATCATGCTTGGAACAGGAAC 840 Query 809 TGGAATAGCTCCATTCAGATCATTTTTGTGGAAAATGTTCTTCGAGGAACACGAGGACTA 868 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 841 TGGAATAGCTCCATTCAGATCATTTTTGTGGAAAATGTTCTTTGAGGAGCACGAGGACTA 900 Query 869 CAAGTTCAATGGTTTGGCCTGGCTCTTCTTGGGTGTACCCACAAGCAGCTCTCTGCTATA 928 |||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| Sbjct 901 CAAGTTCAATGGTTTGGCGTGGCTTTTCTTGGGTGTACCCACAAGCAGCTCACTGCTATA 960 Query 929 CAAGGAGGAGTTTGAGAAGATGAAGGAGAAGAACCCAGACAACTTCAGGCTGGACTTTGC 988 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 CAAGGAGGAGTTTGAGAAGATGAAGGAGAAGAACCCAGACAACTTCAGGCTGGACTTTGC 1020 Query 989 GGTGAGCAGAGAACAGACGAACGACAAGGGAGAGAAAATGTACATTCAGACAAGAATGGC 1048 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1021 GGTGAGCAGAGAGCAGACGAACGAGAAGGGAGAGAAAATGTACATTCAGACAAGAATGGC 1080 Query 1049 AGAGTATGCAGAAGAGCTGTGGGAGTTGCTGAAGAAAGACAACACCTTTGTTTACATGTG 1108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 AGAGTATGCAGAAGAGCTGTGGGAGTTGCTGAAGAAAGACAACACCTTTGTTTACATGTG 1140 Query 1109 TGGTCTGAAGGGTATGGAGAAGGGTATCGATGACATTATGGTCTCACTTGCTGCTAAAGA 1168 |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1141 TGGTCTTAAGGGTATGGAGAAGGGTATCGATGACATTATGGTCTCGCTTGCTGCTAAAGA 1200 Query 1169 TGGGATCGATTGGTTGGAGTACAAGAAGCAATTGAAGAGGAGTGAGCAGTGGAATGTTGA 1228 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1201 TGGGATCGATTGGTTGGAGTACAAGAAGCAATTGAAGAGGAGTGAACAGTGGAATGTTGA 1260 Query 1229 AGTCTACTAAGGAAGGCTTCTGAGGGAGTTATTATATAATGTAGATAAAAAGCT---GAT 1285 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||| Sbjct 1261 AGTCTACTAAGGAAG-CTTCTGAGGGAGTAATTATATAATGTAGATAAAAAGCTTCTGAT 1319 Query 1286 GCATTGTGAAATCTTCATTTATGCTTCTTTCTTCTTTCTCAAGGATTTTCCATCAAAACA 1345 |||||||||||||||||| | ||||||||| ||||||||||||||||||| ||||||||| Sbjct 1320 GCATTGTGAAATCTTCATATCTGCTTCTTTTTTCTTTCTCAAGGATTTTCAATCAAAACA 1379 Query 1346 TTCAAAAGAGAGCATCAATACCATCAAACTACTCTTTCTCACTTGTTGTTCATGTTATAT 1405 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1380 TTCAAAAGAGAGCATCAATACCACCAAACTACTCTTTCTCACTTGTTGTTCATGTTATAT 1439 Query 1406 TTCTTGCAACAATATAGTGAGTTTTGTGATTTATGTTTTTC 1446 ||||||||||||||||||||||||||||| |||||||||| Sbjct 1440 TTCTTGCAACAATATAGTGAGTTTTGTGAAATATGTTTTTC 1480 > AT5G66180.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr5:26448938-26451154 FORWARD LENGTH=1437 Length=1437 Score = 261 bits (141), Expect = 1e-68 Identities = 155/162 (96%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 1285 TGCATTGTGAAATCTTCATTTATGCTTCTTTCTTCTTTCTCAAGGATTTTCCATCAAAAC 1344 ||||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||||| Sbjct 1437 TGCATTGTGAAATCTTCATATCTGCTTCTTTTTTCTTTCTCAAGGATTTTCAATCAAAAC 1378 Query 1345 ATTCAAAAGAGAGCATCAATACCATCAAACTACTCTTTCTCACTTGTTGTTCATGTTATA 1404 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1377 ATTCAAAAGAGAGCATCAATACCACCAAACTACTCTTTCTCACTTGTTGTTCATGTTATA 1318 Query 1405 TTTCTTGCAACAATATAGTGAGTTTTGTGATTTATGTTTTTC 1446 |||||||||||||||||||||||||||||| |||||||||| Sbjct 1317 TTTCTTGCAACAATATAGTGAGTTTTGTGAAATATGTTTTTC 1276 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 71284773900 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5