BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg497092 Length=1594 Score E Sequences producing significant alignments: (Bits) Value AT4G13030.1 | Symbols: | P-loop containing nucleoside triphosp... 2093 0.0 > AT4G13030.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:7607311-7609843 FORWARD LENGTH=1722 Length=1722 Score = 2093 bits (1133), Expect = 0.0 Identities = 1463/1619 (90%), Gaps = 36/1619 (2%) Strand=Plus/Plus Query 1 AAAACGAAGAACAAATAAGAAACCTTGTAGCCATGGGTGGTGATACTTTCAAAGATGATT 60 |||||||||||||| |||| || |||||||||||||||||||||||||||||||||||| Sbjct 59 AAAACGAAGAACAAGTAAG-AAGCTTGTAGCCATGGGTGGTGATACTTTCAAAGATGATG 117 Query 61 TTGTAGATGAAGAATCTTCAAG---ATCATCATCATCTCCTTGTTTTTGTTGTTTCAGTG 117 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 118 TTGTAGATGAAGAATCTTCAAGATCATCATCATCATCTCCTTGTTCTTGTTGTTTCAGTG 177 Query 118 ATGATTCAGGGTTTAAGGATGATGTTTCTGAAGATAATTTCGCAAATTTCTCTAATCATG 177 |||||| ||||||||||||||||||||||||||| |||||| | |||||||||||||||| Sbjct 178 ATGATTTAGGGTTTAAGGATGATGTTTCTGAAGAGAATTTCACCAATTTCTCTAATCATG 237 Query 178 TTACTGATTTGAGAAGAAGAGAAAAATCTTACCAAGAGATTCTTCAAAGTCATGATCTTT 237 |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 238 TTACTGATTTGAGAAGGAGAGAAAAAGCTTACCAAGAGATTCTTCAAAGTCATGATCTTT 297 Query 238 TGCTCAAAAGCAGCAAACGGAAACTTAGACAAGCCAGAAATGAAATTTTGAGATATACTC 297 |||| | || ||||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct 298 TGCTTAGAACCAGCAAACGGAAACTTAGACAAGCCAGAAATGAGATTTTGAGCTATACTC 357 Query 298 CTGGATCATGGTCTGATGTGAAACTGAGCGATTACGATGTTCCAAAGACGACATCGATCA 357 ||||||||||||||||||| || |||| |||||| || ||||||| ||||||||||||| Sbjct 358 CTGGATCATGGTCTGATGTCAAGTTGAGTGATTACAATATTCCAAAAACGACATCGATCA 417 Query 358 TGTTAGTTGGTCCGAAAGGAGCCGGGAAGAGTAGCCTTGTTAATAAGATTTCAAGAGTGA 417 || |||||||||||||||| || ||||||||||||||||||||||||||| ||||||||| Sbjct 418 TGCTAGTTGGTCCGAAAGGGGCTGGGAAGAGTAGCCTTGTTAATAAGATTACAAGAGTGA 477 Query 418 TTGAAGACGACGAGTTTTTCCCAGCTAGAGCTCAAGAATCATTTGGTACGCAGTCTAAAG 477 | |||||||||| |||| ||| || |||||||||||||||||||||||| | |||||||| Sbjct 478 TCGAAGACGACGCGTTTCTCCTAGATAGAGCTCAAGAATCATTTGGTACCCCGTCTAAAG 537 Query 478 GAGGAACATTCTTTGTTCAGGAATATATGATCCCAAGAGGAGGTTCTGCTTCCTTTTGCC 537 ||||||||| |||||||||||| ||||||||| | ||||||||||| ||||| ||||||| Sbjct 538 GAGGAACATACTTTGTTCAGGAGTATATGATCTCGAGAGGAGGTTCCGCTTCATTTTGCC 597 Query 538 TATATGACACGCGTGGCTTGAGCCATATCTCATCATCTGATAACACTAGTATGATTGAGC 597 ||||||| |||||||| ||||||| ||| ||||| ||||||||||||||||||||||||| Sbjct 598 TATATGATACGCGTGGATTGAGCCGTATATCATCGTCTGATAACACTAGTATGATTGAGC 657 Query 598 AGTGGATGACAAAAGGCGTGCATCACGGCGAACCTGTCATCTGGACGTCTGATAGCTCGG 657 | |||||||||| ||||||| |||||||||||||||||||||| | ||||||||||||| Sbjct 658 AATGGATGACAAGGGGCGTGCTTCACGGCGAACCTGTCATCTGGGCATCTGATAGCTCGG 717 Query 658 ATTTAAAGGATAGACTCATCCGAGATGGTGGTACCGGTTATGAGAGAAGGAAAGTGAATT 717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 718 ATTTAAAGGATAGACTCATCCGAGATGGTGGTACCGGTTATGAGAGAAGGAAAGTGAATT 777 Query 718 CCG-TTATCTTTGTTATTAATGCGGTCGAAATCTTGAAATCGATGGAATGTGAAACAAGC 776 | | ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| Sbjct 778 C-GATTATCTTTGTTGTTAATGCGGTCGAAATCTTGAAATCGATGGAATGTGAAACGAGC 836 Query 777 TATGCT-CATATGATATCCACGGCCTTTAACTGTCCGTTACTGTCATTTAAAGATGACAA 835 |||||| | |||||| ||||||||||||||| |||| |||| | ||||||||||| || Sbjct 837 TATGCTTCG-ATGATAACCACGGCCTTTAACTCTCCGATACTATTGTTTAAAGATGATAA 895 Query 836 GCCAGCAGTAGTTATGACTCATGGAGATATGCTTTCACTAGAGGACCGTGCTCGAGTTCG 895 ||||||||| |||||||||||||||||||||||||||| ||||| ||||| ||||| || Sbjct 896 GCCAGCAGTCGTTATGACTCATGGAGATATGCTTTCACGCGAGGAACGTGCCCGAGTACG 955 Query 896 AGTTTTCCTTGGAGAACTTCTCGGTATCCCACCTGACAAACAGATATTCGACATTCCAGA 955 |||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| Sbjct 956 AGTTTTCCTTGGAGAACTTCTCGGTATCCCTCCTCACAAACAGATATTTGACATTCCAGA 1015 Query 956 AAGCCGGGACATAGCCACCGCGCTAACAATCTGCAACTTGCTATGCTATAGTCTTGACCA 1015 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||| | || Sbjct 1016 AAGCCGGGACACAGCCACCGCGATAACAATCTGCAACTTGCTATGCTATAGTCTTCAACA 1075 Query 1016 TGCTGATAAGAATTTTGTGTTTCTTCCCAAAAGGAACTTCACCATATCAAAGGTTGGAGG 1075 |||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| ||||| Sbjct 1076 TGCTGATAAGAATTTTGTGTTTCTTCCCAAAAAGAACTTCACTATATCCAAGGTGGGAGG 1135 Query 1076 AGGAGGCCTCACAAAATGGATCATCTTATTAGACATAATATCAATTGGTCTGATTTTATT 1135 ||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| Sbjct 1136 AGGAGGCCTCACAAAATGGATCAGCTTATTAGACATAATATCAATTGCTCTGGTTTTATT 1195 Query 1136 CATGGCATTGGCTTCAATCTGGGTTGTTACTCATAATCCCGTAAGCGGCCAAAAATTAGC 1195 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1196 CATGGCATTGGCGTCAATCTGGTTTGTTACTCATAATCCCGTAAGCGGCCAAAAATTAGC 1255 Query 1196 CCATGAGGCTGAGCACAAACTGCTTACATTCCCAAGTCCACGGTTAAACAACCTCACACA 1255 ||||| || |||| |||||||||| ||||||||||||| ||||||| ||||||||||| Sbjct 1256 TAATGAGACTCAGCAAAAACTGCTTAAATTCCCAAGTCCATGGTTAAATAACCTCACACA 1315 Query 1256 TGAGGCCCAGCCGATACGTCGCATAGGGCCTCAGCGGGTCATTGGAGGTCCAATCCTTGC 1315 | |||| ||||||| |||||| | |||||| ||||| ||||| |||||||| |||||| Sbjct 1316 TAAGGCAAAGCCGATGCGTCGCTTTGGGCCTAAGCGGATCATTAAAGGTCCAAACCTTGC 1375 Query 1316 ATGCGTTCAACATCCTAAGTCTGAGTCTGTGCCTGATAGTGAGC-A-TA-GCATTGATTT 1372 |||||||||||||||||||||||||| ||||||||| ||||||| | || |||||||||| Sbjct 1376 ATGCGTTCAACATCCTAAGTCTGAGTTTGTGCCTGAAAGTGAGCCAATAAGCATTGATTT 1435 Query 1373 GCAAATAGCGCAACGCTTATGGTTCGACGAAG-GTAAAGTGACCGAGGTCGAACCAAGCT 1431 ||| ||||| | ||||||||||||| |||||| | || ||| |||||| ||||||||||| Sbjct 1436 GCATATAGCTCGACGCTTATGGTTCAACGAAGAGCAA-GTGGCCGAGGCCGAACCAAGCT 1494 Query 1432 TTGACTGGCGAACAACTCGACGCTTGTGGTACGTTGAATGAAAATGTATGTGAGCGTTAA 1491 |||| |||||||| ||||||||||||||||| ||||| ||||| ||||||||||||| | Sbjct 1495 TTGATTGGCGAACTACTCGACGCTTGTGGTATGTTGAGTGAAA-TGTATGTGAGCGTCAG 1553 Query 1492 CATCTTTAA--A---GTTTGA-TA-GT--G-T-G-G---AAACTAGTAATATAAAACAAG 1536 ||||||||| | | || | || || | | | | ||||||||||||||||||||| Sbjct 1554 CATCTTTAATTATAAGCTTAAATAAGTTTGATAGTGTTTAAACTAGTAATATAAAACAAG 1613 Query 1537 TTCTTTTGTTTCTTAAAAAATCTGTTTGGTCATGGTGTCtttttttt-ttttAATTAAA 1594 | ||||||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct 1614 GT-----GTTTCTTAAAAAATCTGTTAGGTCATGGTGT-TTTTTTTTGTTTTAATTAAA 1666 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78714454560 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5