BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg497339 Length=767 Score E Sequences producing significant alignments: (Bits) Value AT5G65050.3 | Symbols: AGL31, MAF2 | AGAMOUS-like 31 | chr5:259... 1059 0.0 AT5G65060.1 | Symbols: MAF3, FCL3, AGL70 | K-box region and MAD... 1027 0.0 AT1G77080.4 | Symbols: MAF1, FLM, AGL27 | K-box region and MADS... 791 0.0 > AT5G65050.3 | Symbols: AGL31, MAF2 | AGAMOUS-like 31 | chr5:25982254-25986326 FORWARD LENGTH=964 Length=964 Score = 1059 bits (573), Expect = 0.0 Identities = 708/772 (92%), Gaps = 14/772 (2%) Strand=Plus/Plus Query 1 aaaaaaaaaaaaaaaa-gagagagagagagagaaagagagagagagaaacgaagaaaaag 59 |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 26 AAAAAAAAAAAAAAAAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAACGAAGAAAAAA 85 Query 60 aaagaagc-aaaaaCATTGTGGGTCTCTGGTGATTAGAATCAAATTAGGGCATAAGCCTT 118 |||||||| |||||||||||||||||| ||||||||| |||||||||||||| |||||| Sbjct 86 AAAGAAGCAAAAAACATTGTGGGTCTCCGGTGATTAGGATCAAATTAGGGCACCAGCCTT 145 Query 119 ATCGGAGAAAGAAGCCATGGGAAGAAGAAAGGTCGAGATCAAGCGAATCGAGAGCAAAAG 178 ||||||| ||||||||||||| |||| ||| |||||||||||||||||||||| |||||| Sbjct 146 ATCGGAGGAAGAAGCCATGGGTAGAAAAAAAGTCGAGATCAAGCGAATCGAGAACAAAAG 205 Query 179 CAGTCGACAAGTTACTTTCTCCAAACGACGCAAAGGTCTCATCGAGAAAGCTCGACAACT 238 ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 206 TAGTCGACAAGTCACTTTCTCCAAACGACGCAATGGTCTCATCGAGAAAGCTCGACAACT 265 Query 239 TTCAATTCTCTCTGAATCTTCCATCGCTGTTCTCGCCGTCTCTGGCTCTGGAAAACTCTA 298 ||||||||||| ||||||||||||||||||||||| |||||| ||||| ||||||||||| Sbjct 266 TTCAATTCTCTGTGAATCTTCCATCGCTGTTCTCGTCGTCTCCGGCTCCGGAAAACTCTA 325 Query 299 CAACG-CTGCCTCCGGTGACAACATGTCAAAGATCATTGATCGTTATGAAATACATCATG 357 ||| | |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 326 CAA-GTCTGCCTCCGGTGACAACATGTCAAAGATCATTGATCGTTACGAAATACATCATG 384 Query 358 CTGATGAACT-GAAAGCCTTAGATCTTGCAGAAAAAATTCGGAATTATCTTCCACACAAG 416 |||||||||| ||| |||||||||||||||||||||| |||||||||||| |||| ||| Sbjct 385 CTGATGAACTTGAA-GCCTTAGATCTTGCAGAAAAAACTCGGAATTATCTGCCACTCAAA 443 Query 417 GAGATACTAGAAATAGTTCAAAGCAAGCTTGAAGAACCAAATGTCGATACTGTAAGTGTA 476 ||| ||||||||||||| |||||||||||||||||| |||||||||||| || |||||| Sbjct 444 GAGTTACTAGAAATAGTCCAAAGCAAGCTTGAAGAATCAAATGTCGATAATGCAAGTGTG 503 Query 477 GATTCTCTAATTTCTATGGAGGAACAGCTCGAGACTACTCTGTCCGTAATTAGAGCTAAG 536 ||| || |||||||| |||||||||||||||||||| |||||||||||| |||||||| | Sbjct 504 GATACTTTAATTTCTCTGGAGGAACAGCTCGAGACTGCTCTGTCCGTAACTAGAGCTAGG 563 Query 537 AAGACAGAACTAATGATGGAGGAAGTGAAGTCCCTTCAAGAAACGGAGATGTTGCTGAGA 596 ||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| Sbjct 564 AAGACAGAACTAATGATGGGGGAAGTGAAGTCCCTTCAAAAAACGGAGAACTTGCTGAGA 623 Query 597 GAAGAGAACCAGA-TTCTGGCTAGCCATACCCAGTTGGGGAAGAATACGTTTCTGGTAAC 655 ||||||||||||| || |||||||||| || ||||||||| ||||||||||| | Sbjct 624 GAAGAGAACCAGACTT-TGGCTAGCCAG-----GT-GGGGAAGAAGACGTTTCTGGTTAT 676 Query 656 AGAAGGTGAGAGAAGAATGTCACGGGAAAATGGCTCCGGCAACAAAGTACCTGAGACTCT 715 ||||||||| ||| |||||||| ||||||||||||||||||||||||||| |||||||| Sbjct 677 AGAAGGTGACAGAGGAATGTCATGGGAAAATGGCTCCGGCAACAAAGTACGGGAGACTCT 736 Query 716 TCCGCTGCTCAAGTAATCACCATCATCAACGGCTCAGTTTTCACCTTAAACT 767 |||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 737 TCCGCTGCTCAAGTAATCACCATCATCAACGGCTGAGCTTTCACCTTAAACT 788 > AT5G65060.1 | Symbols: MAF3, FCL3, AGL70 | K-box region and MADS-box transcription factor family protein | chr5:25987429-25991315 FORWARD LENGTH=939 Length=939 Score = 1027 bits (556), Expect = 0.0 Identities = 680/738 (92%), Gaps = 15/738 (2%) Strand=Plus/Plus Query 32 aaag-agagagagagaaacgaagaaaaagaaagaagcaaaaaCATTGTGGGTCTCTGGTG 90 |||| ||| ||| |||||||||| || ||| ||||||| ||||| |||||| | |||| Sbjct 1 AAAGAAGA-AGATAGAAACGAAG---AA-AAA-AAGCAAACACATTTTGGGTCCCCGGTG 54 Query 91 ATTAGAATCAAATTAGGGCATAAGCCTTATCGGAGAAAGAAGCCATGGGAAGAAGAAAGG 150 |||| |||||||||||||| || |||||||||||||||||||||||||||||||||| | Sbjct 55 GTTAGGATCAAATTAGGGCACAAACCTTATCGGAGAAAGAAGCCATGGGAAGAAGAAAAG 114 Query 151 TCGAGATCAAGCGAATCGAGAGCAAAAGCAGTCGACAAGTTACTTTCTCCAAACGACGCA 210 ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct 115 TCGAGATCAAGCGAATCGAGAACAAAAGCAGTCGACAAGTCACTTTCTCCAAACGACGCA 174 Query 211 AAGGTCTCATCGAGAAAGCTCGACAACTTTCAATTCTCTCTGAATCTTCCATCGCTGTTC 270 ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 175 AAGGTCTCATCGAAAAAGCTCGACAACTTTCAATTCTCTGTGAATCTTCCATCGCTGTTG 234 Query 271 TCGCCGTCTCTGGCTCTGGAAAACTCTACAACGCTGCCTCCGGTGACAACATGTCAAAGA 330 |||||||||| || || |||||||||||| || ||||||||||||||||||||||||||| Sbjct 235 TCGCCGTCTCCGGTTCCGGAAAACTCTACGACTCTGCCTCCGGTGACAACATGTCAAAGA 294 Query 331 TCATTGATCGTTATGAAATACATCATGCTGATGAACTGAAAGCCTTAGATCTTGCAGAAA 390 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 295 TCATTGATCGTTATGAAATACATCATGCTGATGAACTTAAAGCCTTAGATCTTGCAGAAA 354 Query 391 AAATTCGGAATTATCTTCCACACAAGGAGATACTAGAAATAGTTCAAAGCAAGCTTGAAG 450 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 355 AAATTCGGAATTATCTTCCACACAAGGAGTTACTAGAAATAGTCCAAAGCAAGCTTGAAG 414 Query 451 AACCAAATGTCGATACTGTAAGTGTAGATTCTCTAATTTCTATGGAGGAACAGCTCGAGA 510 || |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct 415 AATCAAATGTCGATAATGTAAGTGTAGATTCTCTAATATCTATGGAGGAACAGCTCGAGA 474 Query 511 CTACTCTGTCCGTAATTAGAGCTAAGAAGACAGAACTAATGATGGAGGA-AGTGAAGTCC 569 || ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 475 CTGCTCTGTCAGTAATTAGAGCTAAGAAGACAGAACTAATGATGGAGGATA-TGAAGTCA 533 Query 570 CTTCAAGAAACGGAGATGTTGCTGAGAGAAGAGAACCAGATTCTGGCTAGCCATACCCAG 629 |||||||||| ||||| |||||||| ||||||||||||||||||||||||||| | Sbjct 534 CTTCAAGAAAGGGAGAAGTTGCTGATAGAAGAGAACCAGATTCTGGCTAGCCAG-----G 588 Query 630 TTGGGGAAGAATACGTTTCTGGTAACAGAAGGTGAGAGAAGAATGTCACGGGAAAATGGC 689 | ||||||||| ||||||||||| | ||||||||| ||| |||||||||||||||||||| Sbjct 589 T-GGGGAAGAAGACGTTTCTGGTTATAGAAGGTGACAGAGGAATGTCACGGGAAAATGGC 647 Query 690 TCCGGCAACAAAGTACCTGAGACTCTTCCGCTGCTCAAGTAATCACCATCATCAACGGCT 749 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 648 TCCGGCAACAAAGTACCGGAGACTCTTTCGCTGCTCAAGTAATCACCATCATCAACGGCT 707 Query 750 CAGTTTTCACCTTAAACT 767 || ||||||| |||||| Sbjct 708 GAGCTTTCACCATAAACT 725 > AT1G77080.4 | Symbols: MAF1, FLM, AGL27 | K-box region and MADS-box transcription factor family protein | chr1:28955637-28960096 FORWARD LENGTH=884 Length=884 Score = 791 bits (428), Expect = 0.0 Identities = 593/672 (88%), Gaps = 13/672 (2%) Strand=Plus/Plus Query 100 AAATTAGGGCATAAGCCTTATCGGAGA-AAGAAGCCATGGGAAGAAGAAAGGTCGAGATC 158 |||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| Sbjct 7 AAATTAGGGCATAACCCTTATCGGAGATTTGAAGCCATGGGAAGAAGAAAAATCGAGATC 66 Query 159 AAGCGAATCGAGAGCAAAAGCAGTCGACAAGTTACTTTCTCCAAACGACGCAAAGGTCTC 218 ||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 67 AAGCGAATCGAGAACAAAAGCAGTCGACAAGTCACTTTCTCCAAACGACGCAATGGTCTC 126 Query 219 ATCGAGAAAGCTCGACAACTTTCAATTCTCTCTGAATCTTCCATCGCTGTTCTCGCCGTC 278 ||||| ||||||||||||||||| ||||||| |||||| ||| |||||||| ||| ||| Sbjct 127 ATCGACAAAGCTCGACAACTTTCGATTCTCTGTGAATCCTCCGTCGCTGTTGTCGTCGTA 186 Query 279 TCTGGCTCTGGAAAACTCTACAACGCTGCCTCCGGTGACAACATGTCAAAGATCATTGAT 338 |||| ||| ||||||||||| || || ||||||||||| |||| || |||||||||||| Sbjct 187 TCTGCCTCCGGAAAACTCTATGACTCTTCCTCCGGTGACGACATTTCCAAGATCATTGAT 246 Query 339 CGTTATGAAATACATCATGCTGATGAACTGAAAGCCTTAGATCTTGCAGAAAAAATTCGG 398 |||||||||||||| |||||||||||||| | |||||||||||||| ||||||||||| | Sbjct 247 CGTTATGAAATACAACATGCTGATGAACTTAGAGCCTTAGATCTTGAAGAAAAAATTCAG 306 Query 399 AATTATCTTCCACACAAGGAGATACTAGAAATAGTTCAAAGCAAGCTTGAAGAACCAAAT 458 ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| Sbjct 307 AATTATCTTCCACACAAGGAGTTACTAGAAACAGTCCAAAGCAAGCTTGAAGAACCAAAT 366 Query 459 GTCGATACTGTAAGTGTAGATTCTCTAATTTCTATGGAGGAACAGCTCGAGACTACTCTG 518 ||||||| ||||||||||||||||||||||||| |||||||||| || |||||| ||||| Sbjct 367 GTCGATAATGTAAGTGTAGATTCTCTAATTTCTCTGGAGGAACAACTTGAGACTGCTCTG 426 Query 519 TCCGTAATTAGAGCTAAGAAGACAGAACTAATGATGGAGGA-AGT-GAAGTCCCTTCAAG 576 ||||||| |||||||| |||| ||||||| ||||||||| | | | || ||||||| ||| Sbjct 427 TCCGTAAGTAGAGCTAGGAAGGCAGAACTGATGATGGAGTATA-TCGA-GTCCCTTAAAG 484 Query 577 AAACGGAGATGTTGCTGAGAGAAGAGAACCAGATTCTGGCTAGCCATACCCAGTTGGGGA 636 ||| ||||| ||||||||||||||||||||| ||||||||||||| | | ||| | Sbjct 485 AAAAGGAGAAATTGCTGAGAGAAGAGAACCAGGTTCTGGCTAGCCAGA-----T-GGGAA 538 Query 637 AGAATACGTTTCTGGTAACAGAAGGTGAGAGAAGAATGTCAC-GGGAAAATGGCTCCGGC 695 |||||||||| |||| |||||| | ||||||| |||||| | ||||| | |||||||| Sbjct 539 AGAATACGTTGCTGGCAACAGATGATGAGAGAGGAATGTTTCCGGGAAG-TAGCTCCGGC 597 Query 696 AACAAAGTACCTGAGACTCTTCCGCTGCTCAAGTAATCACCATCATCAACGGCTCAGTTT 755 |||||| |||| |||||||| ||||||||||| || ||||||||||||||||| ||||| Sbjct 598 AACAAAATACCGGAGACTCTCCCGCTGCTCAATTAGCCACCATCATCAACGGCTGAGTTT 657 Query 756 TCACCTTAAACT 767 |||||||||||| Sbjct 658 TCACCTTAAACT 669 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37273737074 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5