BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg497427

Length=194
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G31082.1 | Symbols: CLE7 | CLAVATA3/ESR-RELATED 7 | chr2:132...   309    6e-84


> AT2G31082.1 | Symbols: CLE7 | CLAVATA3/ESR-RELATED 7 | chr2:13241440-13241700 
FORWARD LENGTH=261
Length=261

 Score =  309 bits (167),  Expect = 6e-84
 Identities = 185/194 (95%), Gaps = 0/194 (0%)
 Strand=Plus/Plus

Query  1    ATGGAAGGAAGGATACTTGGGGTTAATTCAAAGAGTGAAGATGGTGAGAGCAACGATCTT  60
            |||||||| ||||||||| |||| |||||||||| | |||||||||||||||||||||||
Sbjct  58   ATGGAAGGGAGGATACTTCGGGTGAATTCAAAGACTAAAGATGGTGAGAGCAACGATCTT  117

Query  61   TTGCAACGGTTAGGTTACAATGTCTCTGAACTAAAGCGTATTGGCCGAGAGCTTTCCGTC  120
            ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct  118  TTGAAACGGTTAGGTTACAATGTTTCTGAACTAAAGCGTATTGGCCGAGAGCTTTCCGTC  177

Query  121  CAAAACGAAGTAGATAGGTTTTCACCAGGAGGGCCTGACCCTCAACATCACTCTTATCCT  180
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct  178  CAAAACGAAGTAGATAGGTTTTCTCCAGGAGGGCCTGACCCTCAACATCACTCTTATCCT  237

Query  181  TTGTCTTCAAAACC  194
             |||||||||||||
Sbjct  238  CTGTCTTCAAAACC  251



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 8601531021


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5