BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg497533 Length=949 Score E Sequences producing significant alignments: (Bits) Value AT2G44120.2 | Symbols: | Ribosomal protein L30/L7 family prote... 1221 0.0 AT2G01250.1 | Symbols: | Ribosomal protein L30/L7 family prote... 612 2e-174 AT3G13580.3 | Symbols: | Ribosomal protein L30/L7 family prote... 532 2e-150 > AT2G44120.2 | Symbols: | Ribosomal protein L30/L7 family protein | chr2:18249042-18250708 REVERSE LENGTH=1220 Length=1220 Score = 1221 bits (661), Expect = 0.0 Identities = 779/835 (93%), Gaps = 12/835 (1%) Strand=Plus/Plus Query 118 GAGAAATGGCTGAATCCAAGGTAGTGGTACCAGAGTCTGTATTAAAAAAGATCAAGAGGC 177 |||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||||| Sbjct 302 GAGAAATGGCTGAATCCAAGGTAGTGGTTCCAGAGTCTGTGCTAAAGAAGATCAAGAGGC 361 Query 178 AAGAGGAATGGGCATTGGCCAAGAAAGAGGAAACTGTTGCTGCTAAGAAGAAGAGTGTTG 237 |||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| Sbjct 362 AAGAGGAATGGGCATTGGCCAAGAAAGATGAAGCTGTAGCTGCTAAGAAGAAGAGTGTTG 421 Query 238 AGACCCGCAAGCTCATCTTCAAGAGAGCTGAGCAGTATGCCAAAGAATACGCTGAGAAGG 297 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 422 AGGCCCGCAAGCTTATCTTCAAGAGAGCTGAGCAGTATGCCAAAGAATACGCTGAGAAGG 481 Query 298 ATAATGAGTTGATCCGATTGAAAAGGGAGGCTAAGTTGAAAGGAGGGTTCTATGTTGATC 357 |||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||| | Sbjct 482 ATAACGAGTTGATCCGATTGAAGCGGGAGGCTAAGTTGAAAGGAGGTTTCTACGTTGACC 541 Query 358 CAGAGGCGAAATTGCTCTTTATCATTCGTATCCGTGGTATCAATGCCATTGACCCAAAAA 417 | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 542 CTGAGGCTAAGTTGCTCTTTATCATTCGTATCCGTGGTATCAATGCCATTGACCCAAAAA 601 Query 418 CCAAGAAAATTTTGCAGCTCCTGCGTTTGAGACAGATCTTTAATGGTGTGTTTCTTAAGG 477 ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 602 CCAAGAAGATTCTGCAGCTCCTGCGTTTGAGACAGATCTTCAATGGTGTGTTTCTTAAGG 661 Query 478 TGAACAAGGCAACAGTAAACATGTTGCGCCGAGTTGAACCTTACGTGACTTACGGATACC 537 ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct 662 TGAACAAGGCAACAGTAAACATGCTGCGCCGAGTTGAACCATACGTGACTTACGGATACC 721 Query 538 CAAACTTGAAGAGTGTCAAGGAACTGATCTACAAAAGGGGTTATGGAAAGCTGAACCACC 597 ||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||| Sbjct 722 CAAACTTGAAGAGCGTTAAGGAACTGATCTACAAAAGAGGTTATGGAAAGCTGAACCACC 781 Query 598 AGAGGATAGCACTTACTGACAACTCGATTGTGGATCAAGCTCTAGGGAAGCATGGTATCA 657 ||||||||||||||||||||||||| ||||||||||| ||||| || |||||||| |||| Sbjct 782 AGAGGATAGCACTTACTGACAACTCCATTGTGGATCAGGCTCTCGGAAAGCATGGGATCA 841 Query 658 TCTGCGTGGAGGATCTGATCCATGAGATCATGACCGTTGGACCTCACTTCAAGGAAGCCA 717 ||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 842 TCTGCGTTGAGGATCTCATCCACGAGATCATGACTGTTGGACCTCACTTCAAGGAAGCCA 901 Query 718 ACAACTTCCTATGGCCATTCCAATTGAAGGCACCACTCGGTGGTCTTAAGAAGAAGAGAA 777 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 902 ACAACTTCCTGTGGCCATTCCAATTGAAGGCACCACTCGGTGGCCTTAAGAAGAAGAGAA 961 Query 778 ACCACTACGTCGAAGGTGGTGATGCTGGAAACAGGGAGAACTTCATCAACGAGCTTGTCA 837 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 962 ACCACTACGTCGAAGGTGGTGATGCTGGAAACAGGGAGAATTTCATCAACGAGCTTGTCA 1021 Query 838 GGAGAATGAATTGATGAAAGCAAGCTTCCTTCTTTATCTTTGCCCATTAATTTCATAGAT 897 ||||||||||||||||||||| |||||||||||||||||| | ||||||| |||| Sbjct 1022 GGAGAATGAATTGATGAAAGC----TTCCTTCTTTATCTTTGC--A--AATTTCAAAGAT 1073 Query 898 TTTGGGATCTGAGTGTTCTTTTT---GTTCCAGTGATCAGAGACTTGTGATCTTT 949 ||||||| | |||| || ||||| |||| ||| |||||||||||||||||||| Sbjct 1074 TTTGGGACC-GAGTTTTTTTTTTTTTGTTCAAGTTATCAGAGACTTGTGATCTTT 1127 > AT2G01250.1 | Symbols: | Ribosomal protein L30/L7 family protein | chr2:132697-134455 REVERSE LENGTH=1081 Length=1081 Score = 612 bits (331), Expect = 2e-174 Identities = 616/749 (82%), Gaps = 38/749 (5%) Strand=Plus/Plus Query 120 GAAATGGCTGAATCCAAGGTAGTGGTACCAGAGTCTGTATTAAAAAAGATCAAGAG-GCA 178 ||||||| ||| || ||||| || || |||||||| || || || |||| ||||| | | Sbjct 104 GAAATGGTTGAGTCAAAGGTTGTAGTTCCAGAGTCGGTGTTGAAGAAGAGGAAGAGAG-A 162 Query 179 AGAGGAATGGGCATTGGCCAAGAAAG-AGGAAACTGTT---GCTGCTAAGAAGAAGAGTG 234 ||||||||||| |||| ||| ||| | | || |||| || || |||||||||| | Sbjct 163 GGAGGAATGGGCTTTGGAGAAG-AAGCA-G-AA-TGTTGAAGCCGCCAAGAAGAAGAACG 218 Query 235 TTGAGACCCGCAAGCTCATCTTCAAGAGAGCTGAGCAGTA-TGCCAAAGAATACGCTGAG 293 |||| | | ||||| |||||||| ||||| ||||| || | |||| ||||| || ||| Sbjct 219 CCGAGAACAGGAAGCTTATCTTCAAAAGAGCCGAGCAATACT-CCAAGGAATATGCCGAG 277 Query 294 AAGGATAATGAGTTGATC-CGATTGAAAAGGGAGGCTAAG-TTGAAAGGAGGGTTCTATG 351 ||||| || ||||||||| || |||||| | ||||| ||| || || ||||| ||||||| Sbjct 278 AAGGAGAAGGAGTTGATCTCG-TTGAAACGCGAGGCCAAGCTT-AAGGGAGGTTTCTATG 335 Query 352 TTGATCCAGAGGCGAAATTGCTC-T-TT-ATCATTCGTATCCGTGGTATCAATGCCATTG 408 |||| || || || || |||| | || ||||| ||||||||||||||||||||||||| Sbjct 336 TTGACCCTGAAGC-TAA--GCTCTTGTTCATCATCCGTATCCGTGGTATCAATGCCATTG 392 Query 409 ACCCAAAAACCAAGAAAATTTTGCAGCTCCTGCGTTTGAGACAGATCTTT-AATGGTGTG 467 |||| || || ||||| ||| | |||||| |||||||||||||||| ||| |||||||| Sbjct 393 ACCCTAAGACTAAGAAGATTCTCCAGCTCTTGCGTTTGAGACAGAT-TTTCAATGGTGT- 450 Query 468 TTTC-TTAAGGTGAACAAGGCAAC-AGTAAACATG-TTGCGCCGAGTTGAACCTTACGTG 524 |||| |||| || |||||||| || | | |||||| || ||||| ||||| || || || Sbjct 451 TTTCCTTAAAGTCAACAAGGCTACGA-TGAACATGCTT-CGCCGTGTTGAGCCCTATGTC 508 Query 525 ACTTACGGATACCCAAACTTGAAGAGTGTCAAGGAACTGATCTACAAAAGGGGTTATGGA 584 |||||||||| ||| ||||||||||||||||||||| |||||||||| || ||||| ||| Sbjct 509 ACTTACGGATTCCCTAACTTGAAGAGTGTCAAGGAATTGATCTACAAGAGAGGTTACGGA 568 Query 585 AAGCTGAACCACCAGAGGATAGCACTT-ACTGACAACTCGATTGTGGATCAAGCTCTAGG 643 ||||| ||||||||||||||||| || ||||||||||| ||||| || || ||||| || Sbjct 569 AAGCTTAACCACCAGAGGATAGCT-TTGACTGACAACTCTATTGTAGAGCAGGCTCTTGG 627 Query 644 GAAGCATGGTATCATCTGCG-TGGAGGATCTGATCCATGAGAT-CATGACCGTTGGACCT 701 |||||||||||||| ||| || ||||| ||||||| ||||| | | || || |||||| Sbjct 628 AAAGCATGGTATCATTTGCACTG-AGGATTTGATCCACGAGATTC-TAACAGTAGGACCT 685 Query 702 CACTTCAAGGAAGCCAACAACTTCCTATGGCCATTCCAA-TTGAAGGCACCACTCGGTGG 760 || ||||||||||||||||||||||| ||||||||||| || ||||||||||| ||||| Sbjct 686 CATTTCAAGGAAGCCAACAACTTCCTTTGGCCATTCCAGCTT-AAGGCACCACTAGGTGG 744 Query 761 TCTTAAGAAGAAGAGAAACCACTACGTCGAAGGTGGTGATGCTGGAAACAGGGAGAACTT 820 || |||||||||||||| |||||||| |||||||||||||| |||||| | |||||||| Sbjct 745 CCTCAAGAAGAAGAGAAATCACTACGTGGAAGGTGGTGATGCCGGAAACCGTGAGAACTT 804 Query 821 CATCAACGAGCTTGTCAGGAGAATGAATT 849 |||||| |||||| ||||||| ||||||| Sbjct 805 CATCAATGAGCTTATCAGGAGGATGAATT 833 > AT3G13580.3 | Symbols: | Ribosomal protein L30/L7 family protein | chr3:4433171-4435305 FORWARD LENGTH=1569 Length=1569 Score = 532 bits (288), Expect = 2e-150 Identities = 577/715 (81%), Gaps = 26/715 (4%) Strand=Plus/Plus Query 150 GAGTCTGTATTAAAAAAGATCAAGAGGCAAGAGGAATGGGCA-TTGGCCAAGAAAGAGGA 208 ||||| || || || |||| |||||| | || ||||||||| || ||||||||| ||| Sbjct 672 GAGTCAGTGTTGAAGAAGAGAAAGAGGGAGGAAGAATGGGCACTT-GCCAAGAAACAGG- 729 Query 209 AAC-TGTTGCTGCTAAGAAGAAGAGTGTTGAGACCCGCAAGCTCATCTTCAAGAGAGCTG 267 | | || ||||| || ||| ||| || ||||| | || ||||| || || | ||| Sbjct 730 AGCTTGAGGCTGCCAAAAAGCAGAATGCTGAGAAGAGGAAACTCATATTTAACCGGGCTA 789 Query 268 AGCAGTA-TGCCAAAGAATACGC-TGAGAAGGATAA-TGAGTTGATCCGA-TTGAAAAGG 323 | ||||| | |||| || ||| | ||||| || || || || |||| | |||| | Sbjct 790 AACAGTACT-CCAAGGAGTAC-CAGGAGAAAGA-AAGGGAATTAATCC-AGCTGAAGCGT 845 Query 324 GAGGCTAAGTTGAAAGGAGGGTTCTATGTTGATCCAGAGGCGAAATTGCTCTTT-ATCAT 382 ||||| || ||||||||||| || |||||||| ||||| || ||| |||| ||| || || Sbjct 846 GAGGCAAAATTGAAAGGAGGCTTTTATGTTGACCCAGAAGCTAAACTGCT-TTTCATTAT 904 Query 383 TCGTATCCGTGGTATCAATGCCATTGACCCAAAAACCAAGAAAATTTTGCAGCTCCTGCG 442 |||||||||||||||||||||||||||||||| || ||||| |||||||| || |||| Sbjct 905 CCGTATCCGTGGTATCAATGCCATTGACCCAAAGACAAAGAAGATTTTGCAACTTTTGCG 964 Query 443 TTTGAGACAGATCTTT-AATGGTGTGTTTCTT-AAGGTGAACAAGGCAAC-AGTAAACAT 499 ||| |||||||| ||| ||||||||||| ||| ||||| ||||||||||| | ||| ||| Sbjct 965 TTTAAGACAGAT-TTTCAATGGTGTGTT-CTTGAAGGTCAACAAGGCAACCATTAA-CAT 1021 Query 500 G-TTGCGCCGAGTTGAACCTTACGTGACTTACGGATACCCAAACTTGAAGAGTGTCAAGG 558 | || ||||| |||||||| || || || || |||||||| ||||| || ||||| |||| Sbjct 1022 GCTT-CGCCGTGTTGAACCCTATGTAACCTATGGATACCCGAACTTAAAAAGTGTGAAGG 1080 Query 559 AACTGATCTACAAAAGGGGTTATGGAAAGCTGAACCACCAGAGGA-TAGCACTTA-CTGA 616 || |||| |||||| | |||| ||||||||| ||||||||||||| | || |||| | || Sbjct 1081 AATTGATTTACAAACGAGGTTTTGGAAAGCTTAACCACCAGAGGACT-GC-CTTAACAGA 1138 Query 617 CAACTCGATTGTGGATCAAGCTCTAGGGAAGCATGGTATCATCTGCGTGGAGGATCTGAT 676 ||| || ||||| ||||| | ||||| |||||||| ||||||||||| ||||||||||| Sbjct 1139 CAATTCTATTGTAGATCAGGGGCTAGGAAAGCATGGCATCATCTGCGTTGAGGATCTGAT 1198 Query 677 CCATGAGATCATGACCGTTGGACCTCACTTCAAGGAAGCCAACAACTTCCTATGGCCATT 736 ||||||||||||||| ||||| || || |||||||||||||| ||||| | |||||||| Sbjct 1199 CCATGAGATCATGACGGTTGGGCCACATTTCAAGGAAGCCAATAACTTTTTGTGGCCATT 1258 Query 737 CCAATTGAAGGCACCACTCGGTGGTCTTAAGAAGAAGAGAAACCACTACGTCGAAGGTGG 796 ||| |||||||| ||| | || || | ||||||||||| ||||| ||||| ||||| || Sbjct 1259 CCAGTTGAAGGCTCCATTGGGAGGGATGAAGAAGAAGAGGAACCATTACGTGGAAGGAGG 1318 Query 797 TGATGCTGGAAACAGGGAGAACTTCATCAACGAGCTTGTCAGGAGAATGAATTGA 851 |||||||||||| | |||||||||||||||||||| || ||||||||||| ||| Sbjct 1319 AGATGCTGGAAACCGCGAGAACTTCATCAACGAGCTCGTTAGGAGAATGAACTGA 1373 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46416351828 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5