BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg887362 Length=639 Score E Sequences producing significant alignments: (Bits) Value AT5G43750.1 | Symbols: NDH18 | NAD(P)H dehydrogenase 18 | chr5:... 953 0.0 > AT5G43750.1 | Symbols: NDH18 | NAD(P)H dehydrogenase 18 | chr5:17579966-17581222 REVERSE LENGTH=850 Length=850 Score = 953 bits (516), Expect = 0.0 Identities = 601/642 (94%), Gaps = 6/642 (1%) Strand=Plus/Plus Query 1 ATGGCAACGGTCATGATTCTCTCTCCCAAATCGATCCCAAAGATCA-TAGATTCGAAGTT 59 ||||||||||||| ||||||||| ||||||||||| |||||| ||| | ||||| || || Sbjct 78 ATGGCAACGGTCACGATTCTCTCACCCAAATCGATTCCAAAGGTCACT-GATTCCAAATT 136 Query 60 TGGTGTTAAGGTTCCTGATCAGACCGTCAATGTCGTGAAATGCGGCAATTCCGGCCGGAG 119 || | || |||| ||||||||| |||||||||||| ||||||||||| ||||||||||| Sbjct 137 CGGAGCTAGGGTTTCTGATCAGATCGTCAATGTCGTAAAATGCGGCAAATCCGGCCGGAG 196 Query 120 ATTGAGGTTAGCGAAGCTGGTCTCAGCTGCTGGATTGTCACAGATTGAACCAGATATAAA 179 ||||| ||||||||||||||||||||| ||||||||||||||||| |||||||| || || Sbjct 197 ATTGAAGTTAGCGAAGCTGGTCTCAGCGGCTGGATTGTCACAGATCGAACCAGACATCAA 256 Query 180 CGAAGACCCCATTGGTCAATTTGAGATTAATAGCATTGAAATGGAAGATTTCAAGTATGG 239 ||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct 257 CGAAGACCCGATTGGTCAATTCGAGACTAATAGCATTGAAATGGAAGATTTCAAGTATGG 316 Query 240 ATATTACGATGGAGCTCATACTTACTATGAAGGAGAAGTTCAAAAGGGAACATTTTGGGG 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 317 ATATTACGATGGAGCTCATACTTACTATGAAGGAGAAGTTCAAAAGGGAACATTTTGGGG 376 Query 300 AGCAATTGCTGATGACATTGCTGCTGTGGATCAAACAAATGGATTTCAAGGTTTAATCTC 359 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct 377 AGCAATTGCTGATGACATTGCTGCTGTGGATCAAACTAATGGGTTTCAAGGTTTGATCTC 436 Query 360 TT-TGATGTTTCTTCCTGCTATAGCTGCA-GGGATGTATTTTGATGCTCCGGGTGAGTAC 417 || | ||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 437 TTGT-ATGTTTCTTCCTGCTATAGCT-CTTGGGATGTATTTTGATGCTCCGGGTGAGTAC 494 Query 418 TTGTTCATAGGTGCAGCGTTGTTCACGGTAGTGTTTTGTATAATAGAGATGGATAAACCA 477 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 495 TTGTTCATAGGTGCAGCGTTATTCACGGTAGTGTTCTGTATAATAGAGATGGATAAACCT 554 Query 478 GACCAGCCACACAACTTTGAGCCTCAGATATACAAATTGGAGAGAGGAGCTCGCGATAAG 537 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct 555 GACCAGCCACACAACTTCGAGCCTCAGATATACAAATTGGAGAGAGGAGCTCGTGACAAG 614 Query 538 CTCATTAATGATTACAACACAATGAGCATCTGGGACTTTAATGACAAGTATGGTGATGTA 597 ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 615 CTCATTAATGACTACAACACAATGAGCATTTGGGACTTTAATGACAAATATGGTGATGTA 674 Query 598 TGGGATTTCACCATTGAGAAAGATGATATCGCCACACGATAA 639 |||||||||||||||||||||||||||||||||||||||||| Sbjct 675 TGGGATTTCACCATTGAGAAAGATGATATCGCCACACGATAA 716 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30843766258 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5