BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg887503 Length=222 Score E Sequences producing significant alignments: (Bits) Value AT5G44565.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 333 4e-91 > AT5G44565.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr5:17951512-17953133 FORWARD LENGTH=576 Length=576 Score = 333 bits (180), Expect = 4e-91 Identities = 209/223 (94%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 1 ATGGCAATGAGTGGTTCTTCAGGTTTAGGTCATGTGCTCATGCTTCTTCTTCTTCTTAGC 60 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct 84 ATGGGAATGAGTGGTTCTTCAGGTTTAGTTCATGTGCTCATGCTTCTTCTTCTTCTCAGC 143 Query 61 ACCCTCTTTCACCATACCCAATCTGCTTTGCCCTCTGATCA-TGAACAACTCTCAATAAC 119 | |||||||||||||||| ||||| |||||||||||||| | |||||||||||||||||| Sbjct 144 ATCCTCTTTCACCATACCGAATCTACTTTGCCCTCTGAT-AGTGAACAACTCTCAATAAC 202 Query 120 TGGGAGGAGAATGATGGCGAATTATAAGCCCAATGCTCCAATACAAACACCACCATCAAG 179 |||||||||||||||||||||||||||||||||| | || || |||||||||||||||| Sbjct 203 TGGGAGGAGAATGATGGCGAATTATAAGCCCAATACAGCAGTAGAAACACCACCATCAAG 262 Query 180 AAGTAGACGAGGTGGTGGTGGTCAGAATACGGGAGGAGATTGA 222 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 263 AAGTAGACGAGGTGGTGGTGGTCAGAATACGGGAGCAGATTGA 305 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 9953014302 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5