BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg887645
Length=3366
Score E
Sequences producing significant alignments: (Bits) Value
AT5G11250.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 1797 0.0
AT5G38340.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 760 0.0
AT3G25510.1 | Symbols: | disease resistance protein (TIR-NBS-L... 479 8e-134
AT3G44480.1 | Symbols: RPP1, cog1 | Disease resistance protein ... 440 4e-122
AT3G44630.3 | Symbols: | Disease resistance protein (TIR-NBS-L... 403 5e-111
AT3G03855.1 | Symbols: | pseudogene of disease resistance prot... 228 3e-58
AT3G44400.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 220 5e-56
> AT5G11250.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) | chr5:3587978-3591960 REVERSE LENGTH=3570
Length=3570
Score = 1797 bits (973), Expect = 0.0
Identities = 1935/2382 (81%), Gaps = 136/2382 (6%)
Strand=Plus/Plus
Query 8 CTTCTT-GTTTCTTCCTTACCATTATTGCTGCTGCAATAGGATTCTTCTTGCTTTTTAGA 66
|||||| |||| |||||||||| | |||| ||||||||||| |||||| ||||| |||
Sbjct 5 CTTCTTCGTTT-TTCCTTACCACTGTTGCAGCTGCAATAGGCTTCTTCACCCTTTTGAGA 63
Query 67 AAACTCAGATTCCATCAAGAAGATAACAAAGAAAAGAA--C-tcttcttct-tcttcttc 122
|||||||||||||||| | ||||||||||||||||| | |||||| | ||| ||||
Sbjct 64 AAACTCAGATTCCATC---ATGATAACAAAGAAAAGAAGTCAACTTCTT-TATCTCCTTC 119
Query 123 ATCAACACCATCTTCTTTAG-CTCCTTCATCACCACCACCATCGTCTTTGGATCGCATCT 181
|||| | ||||||||||| | ||||||||||| || ||| | |||| | | ||||||
Sbjct 120 ATCATCTCCATCTTCTTT-GTCTCCTTCATCAGTTCCTCCACCTTCTTCGTCTTGCATCT 178
Query 182 GGACACACCATGTGTTTCCAAGTTTCCGAGGGGAAGATGTCCGTAGAGACTTTCTTAGTC 241
|||||||||| || ||||| || ||| | |||||||||||||||||||||||||| ||||
Sbjct 179 GGACACACCAAGTCTTTCCCAGCTTCAGCGGGGAAGATGTCCGTAGAGACTTTCTCAGTC 238
Query 242 ACATTCATATGGAGTTTCAAAGAATGGGAATCACACCATTCATTGATAATGAGATCGAGA 301
||||||| |||||||||||||||||||||||||| |||||| ||||||||||||| | |
Sbjct 239 ACATTCAGATGGAGTTTCAAAGAATGGGAATCACTCCATTCGTTGATAATGAGATTAAAA 298
Query 302 GAGGACAATCCATCGGTCCCGAAC-TCATTCGAGCAATTAGAGAATCCAAGATCGCAATT 360
||||| ||||||||||||| || | || | || || ||||||| || ||||| ||||||
Sbjct 299 GAGGAGAATCCATCGGTCCTGAGCTTC-TGCGGGCTATTAGAGGGTCTAAGATAGCAATT 357
Query 361 ATCTTGCTGTCAAGAAACTACGCTTCTTCGAGCTGGTGTCTTGACGAATTGGCGGAGATT 420
|||||||| || || ||||| |||||||| | ||||||||||||||| ||| |||||||
Sbjct 358 ATCTTGCTCTCTAGGAACTATGCTTCTTCAAAATGGTGTCTTGACGAACTGGTGGAGATT 417
Query 421 ATGAAGTGCAGGGAAGAAT-TGGGTCAAACAGTTTTGGCTGT-TTTCTATAAAGTGGATC 478
||||| ||||| ||||| | | |||||||| || |||| | ||| || ||||||||||
Sbjct 418 ATGAAATGCAGAGAAGAGTAT-GGTCAAACTGTGATGGCCATATTT-TACAAAGTGGATC 475
Query 479 CATCTGATGTAAAGAAGCTGACCGGAGATTTTGGAAAAGTCTTCaaaaaaaCATGTGCCG 538
| ||||||||||| || |||||||||||||| || |||||||| | |||||| |||||||
Sbjct 476 CTTCTGATGTAAAAAATCTGACCGGAGATTTCGGGAAAGTCTTTAGAAAAACTTGTGCCG 535
Query 539 GTAAAACAAAAG-AGCACGTTGGGAGATGGAGACAAGCTTTGGCAAATGTCGCCACAATC 597
|| |||| |||| || || ||||||||||||||||||||| || ||| || |||||| |
Sbjct 536 GT-AAACCAAAGAAGGACATTGGGAGATGGAGACAAGCTTGGGAAAAAGTGGCCACAGTA 594
Query 598 GCCGGTTACCATTCGACCAACTGGGATAATGAAGCTACCATGAT-TAGAAATATCGCTAC 656
|| ||||||||||| | |||||||||||||||||| ||||||| ||||| ||||| ||
Sbjct 595 GCTGGTTACCATTCAATCAACTGGGATAATGAAGCGGCCATGATCAAGAAA-ATCGCCAC 653
Query 657 TGATATATCCAACA-AGTTGAATAATTCTGC-CT-CATCAAGTGATTTTGATGGGTTGGT 713
|||||| || |||| | |||| |||||| | || | ||| ||||||| || ||||| ||
Sbjct 654 TGATATTTCGAACATA-TTGATTAATTC--CACTCCTTCACGTGATTTCGACGGGTTAGT 710
Query 714 TGGGATGACTGCTCATTT-GAAGAAGATGGAACCATTGTTATGCCTAGACTCAGATGAAG 772
|||||||| |||||||| ||| |||||| |||| ||||||||||||||| |||| ||||
Sbjct 711 TGGGATGAGAGCTCATTTAGAA-AAGATGAAACCGTTGTTATGCCTAGACACAGACGAAG 769
Query 773 TGAGGATGATTGGGATTTGGGGTCCTTCTGGGATTGGGAAGACGACCATCGCCAGAGTTG 832
| ||||| |||||||||||||||||| |||||||||||||||| || || ||||||||||
Sbjct 770 TAAGGATAATTGGGATTTGGGGTCCTCCTGGGATTGGGAAGACCACAATTGCCAGAGTTG 829
Query 833 TATACAACAAACTCT-CTAGCAGTTTTCAACTGAGTGTCTTTATGGA-ATCTATCGAAGC 890
|||||||| |||||| | | |||||| |||||||||||||||||||| | |||| ||||
Sbjct 830 TATACAACCAACTCTCCCA-CAGTTTCCAACTGAGTGTCTTTATGGAGA-ATATCAAAGC 887
Query 891 AAAATATACAAGACC-A-T-GTTCCGATGACTATAGTGCCAAGTTGCAGTTACAACAGCA 947
||| ||||| ||||| | | | ||||||||||| ||||| |||||||| |||||||| |
Sbjct 888 AAACTATACCAGACCAACTGGCTCCGATGACTACAGTGCAAAGTTGCAATTACAACA-AA 946
Query 948 -GTTTATGTCTCAAATAACCAA-CCAGAGTGGTATGA-AGATTTCTCATTTAGGTGTTGT 1004
||||||||||||||||||||| | | || | ||| | ||||| |||||||||| ||||
Sbjct 947 TGTTTATGTCTCAAATAACCAAGCAAAAG-GATAT-AGAGATTCCTCATTTAGGAGTTGC 1004
Query 1005 TCAAGATAGGCTAAAAGACAAGAAAGTTCTTGTTGTTCTTGATGGTGTGGACAAGTCAAT 1064
||||||||| | ||||||||||||||||| || ||||||||||| ||| || ||||| |
Sbjct 1005 CCAAGATAGGTTGAAAGACAAGAAAGTTCTGGTCGTTCTTGATGGGGTGAACCAGTCAGT 1064
Query 1065 GCAACTAGACGCCATGGCAAAAGAAACTTGGTGGTTTGGTCCTGGGAGTCAG-ATTATCA 1123
|||||||| || ||||| |||||| |||||||||||||||||||||||| | || ||||
Sbjct 1065 ACAACTAGATGCGATGGCGAAAGAAGCTTGGTGGTTTGGTCCTGGGAGTC-GAATCATCA 1123
Query 1124 TCACAGCACAAGATC-GAAAGATTTTTAGGGAACATGGGATTAACCATATATACAAGGTG 1182
| ||| ||||||||| |||| ||||||| | |||||||||||||||||| |||||||||
Sbjct 1124 TTACAACACAAGATCAGAAA-CTTTTTAGAGCACATGGGATTAACCATATTTACAAGGTG 1182
Query 1183 GGTTTTCCATCAACTGATGAGGCCCTTCAAATCTTGTGCACATATGCTTTTGGTCAAAAA 1242
| ||||||| ||||||| ||||| ||||||||||| |||| |||||||||||||||||
Sbjct 1183 GATTTTCCACCAACTGAAGAGGCTCTTCAAATCTTCTGCATGTATGCTTTTGGTCAAAAT 1242
Query 1243 TCCCCTAAACATGGTTTTGAAGAA-CTTGCTTGGGAAGTTACAAATCTTGCTGGTGAA-C 1300
||||||||| |||||||| |||| ||||||||| |||| | ||||||||| ||| || |
Sbjct 1243 TCCCCTAAAGATGGTTTT-CAGAACCTTGCTTGGAAAGTAATAAATCTTGCCGGT-AACC 1300
Query 1301 TCCCTTTGGGACTAAGGGTTATGGGCTCTTATTTTCGGGGAATGTCTA-AGATGGAGTGG 1359
|||||||||| ||||| |||||||||| |||||| |||||||||| | ||| ||||||
Sbjct 1301 TCCCTTTGGGGCTAAGAATTATGGGCTCCTATTTTAGGGGAATGTCGAGAGA-AGAGTGG 1359
Query 1360 ACGAAAG-CACTACCAAGGTTAAG-GAGTAGCCTTGACGCTGATATTCTTAGCATTTTGA 1417
| |||| || ||||||| || || ||||||||||||||||||||||| ||||||||||
Sbjct 1360 A-AAAAGTCATTACCAAGATT-AGAGAGTAGCCTTGACGCTGATATTCAAAGCATTTTGA 1417
Query 1418 AGTTCAGCTATGATGCCTTAGATGACGAAGACAAATATTTGTTTCTTCATATAGCTTGCT 1477
||||||||||||| || |||||||||||||| ||| |||| |||||||||||||| || |
Sbjct 1418 AGTTCAGCTATGACGCTTTAGATGACGAAGATAAAAATTTATTTCTTCATATAGCATGTT 1477
Query 1478 TCTTCAATTATAAAAG-GATTGGGAGAGTGGAAGAGTATCTTGCAGAGACGTTCT-TGGA 1535
| ||||| | |||| |||| || | |||||||| |||||||| ||| ||| | ||||
Sbjct 1478 TTTTCAACGGT-AAAGAGATTAAGATATTGGAAGAGCATCTTGCAAAGAAGTT-TGTGGA 1535
Query 1536 TGTGAGTCATCGGCTTAATGGCTTAGCTGAAAAATCGCTCATATC-TAT-G-AA-CGACG 1591
|| || || | ||||| | ||||||||| ||||| |||||||| | | | || | |
Sbjct 1536 AGTCAGGCAAAGACTTAACGTCTTAGCTGAGAAATCTCTCATATCTTTTAGCAATTG-GG 1594
Query 1592 G-AGTGATA-ATCATGCATGATCTGCTAGTC-AAACTAGGTATAGACATTGTCCGTAAAC 1648
| | | ||| | |||||| | ||||||| | ||||||||| ||| ||||| ||||| |
Sbjct 1595 GAACT-ATAGA-GATGCATAAACTGCTAG-CAAAACTAGGTGGAGAAATTGTTCGTAACC 1651
Query 1649 AGTCTCTTCGTGAGCCTGGACAACGACTA-TTTTTGGTTGATGCACG-AGAAATTTGTGA 1706
| ||| | | ||||||||||||||| | | |||||| |||||| | | ||| || |||||
Sbjct 1652 AATCTATCCATGAGCCTGGACAACG-CCAGTTTTTGTTTGATGGA-GAAGAGATATGTGA 1709
Query 1707 AGTACTCAATCTTGATGC-GAATGGCAGTAGAAGTGTTATAGGCATAAATTTCAACTTTG 1765
|| || ||| |||||| | | || |||| |||||| ||||||||| ||||| ||
Sbjct 1710 TGTGCTGAATGGTGATGCAGCA-GGTAGTAAAAGTGTAATAGGCATAGATTTCCAC---- 1764
Query 1766 GTGGGA-ATAGGATCAAGGAA-AAGTTAC-ATAT-AAGTGAGAGGGCCTTTCAAGGAATG 1821
| | ||| ||| ||||| || || | |||| || |||||| | ||| ||||||||
Sbjct 1765 -T---ACATA--ATCGAGGAAGAA-TT-CGATATGAA-TGAGAGAGTTTTTGAAGGAATG 1815
Query 1822 TCTAATCTCCAATTCTTAAGAGTC-AAAGGGAATAACAATACAATAC-ATCTA-CCGCAC 1878
|||||||| || ||||||||| || | | | | | ||||| | | || || || | |
Sbjct 1816 TCTAATCTTCAGTTCTTAAGATTCGATTGTG-ACCATGATACATTGCAAT-TATCC-CGC 1872
Query 1879 GGTTTAGAG-TATATATCTCGTAAACTTCGA-TTACTGGACTGGACT-TATTTTCCGATG 1935
||| | ||| ||| | ||||||||||||| | ||||| || |||| | ||||||||||||
Sbjct 1873 GGTCT-GAGCTATCTTTCTCGTAAACTTC-AGTTACTAGATTGGA-TATATTTTCCGATG 1929
Query 1936 ACATGTTTGCCTCCTATTTTCAACACGGACTTCCTTGTTGAACTAGACATG-CGTTGCAG 1994
|||||||||||| ||| | | ||| ||| |||||| |||||||| || || || |||
Sbjct 1930 ACATGTTTGCCTTCTACTGTGAACGTGGAGTTCCTTATTGAACTAAACCTGACG-CACAG 1988
Query 1995 CAAACTTGAGAAGTTGTGGGAAGGAATTAAACCGCTTCCA-AATCTCAAGCGGATGGATT 2053
||| ||||| | ||||||||||||| ||||||||||| || ||||||| || ||||||||
Sbjct 1989 CAAGCTTGATATGTTGTGGGAAGGAGTTAAACCGCTT-CATAATCTCAGGCAGATGGATT 2047
Query 2054 TGAGTTCGTCTCTCCTCTTAAAGGAGCTTCCTGATCTCTCAACTGCCACCAATCTTCGGA 2113
|||||| ||| | ||| |||||||||||||||||||||||||||| ||||| || |
Sbjct 2048 TGAGTTATTCTGTAAACTTGAAGGAGCTTCCTGATCTCTCAACTGCCATTAATCTCCGAA 2107
Query 2114 CA-TTGAATCTT-CGTTATTGCTCAAGTCTGATGAATCTCCCTTCCTCTATTGGGAATGC 2171
| |||| |||| | | ||||||| |||||||| || |||||||| | ||||||||||||
Sbjct 2108 -AGTTGATTCTTTC-TAATTGCTCCAGTCTGATCAAACTCCCTTCTTGTATTGGGAATGC 2165
Query 2172 CA-CTAATCTCGAGTTATT-ATATCTCGGTGGATGCTCAAGTCTGGTGGAGCT-CCCTTC 2228
|| | ||||||||| ||| | |||| ||||||||||||||| |||||||| |||| |
Sbjct 2166 CATC-AATCTCGAGG-ATTTAGATCTTAATGGATGCTCAAGTCTTGTGGAGCTTCCCT-C 2222
Query 2229 CTCTATTGGGAAT-CTCATCAATCTA-AAAGAATTGGATCTTAGC-AGTTTATCATGTCT 2285
| | ||||| || | ||| || || ||| ||||| |||| || | || ||| |||
Sbjct 2223 -T-T-TTGGGGATGC-CATTAACCTTCAAA-AATTGCTTCTTCGCTA-TTGCTCAAATCT 2276
Query 2286 AGTGGAGCTCCC-T-TTCTCGATTGGGAAT-CTCATCAATCT 2324
||||||||||| | |||| ||||||||| | ||| |||||
Sbjct 2277 GGTGGAGCTCCCCTCTTCT--ATTGGGAATGC-CATTAATCT 2315
Score = 645 bits (349), Expect = 0.0
Identities = 1001/1300 (77%), Gaps = 108/1300 (8%)
Strand=Plus/Plus
Query 2097 TGCCACCAATCTTC-GGACATTGAATCTTCGTTATTGCTCAAGTCTGAT--GAATCTCCC 2153
||||| ||||||| ||| |||| ||||| ||||||||| |||||||| || | ||||
Sbjct 2304 TGCCATTAATCTTCGGGA-ATTGGATCTTTATTATTGCTCGAGTCTGATCAGACT-TCCC 2361
Query 2154 TTCCTCTATTGGGAATGCCACTAATC--TCGAGTTATTATATCTCGGTGGATGCTCAAGT 2211
||||||||||||||||||| ||||| | || || ||| |||| |||||||||| |
Sbjct 2362 -TCCTCTATTGGGAATGCCATTAATCTTTTGA-TT-TTAGATCTTAACGGATGCTCAAAT 2418
Query 2212 CTGGTGGAGCTCCCTTCCTCTATTGGGAAT-CTCATCAATCT-AAAAGAATTGGATCTTA 2269
|| |||||||||| ||||| ||||||||| | ||| ||||| ||| || ||||||||
Sbjct 2419 CTATTGGAGCTCCCATCCTCCATTGGGAATGC-CATTAATCTCCAAA-AACTGGATCTTC 2476
Query 2270 GCAGTTTATC-ATGTCTAGTGGAGCTCCCTTTC-TCGATTGGGAAT-CTCATCAATCT-- 2324
|||| | | | | ||| | |||||||| || || ||||||||| | ||| |||||
Sbjct 2477 GCAGATGCGCAAAG-CTATTAGAGCTCCC-GTCTTCTATTGGGAATGC-CATTAATCTCC 2533
Query 2325 AAAAGTATTGAATCTTAGCA-G-TTTATCATGTCTAG-TGGAGCTCCCTTTC-TCGATTG 2380
|||| || |||| | | | || ||| |||| | |||||||||| || || ||||
Sbjct 2534 AAAA--CCTGCTTCTT-G-ACGATTGCTCAAGTCT-GTTGGAGCTCCC-CTCGTCTATTG 2587
Query 2381 GAAATGCCACCAACCTTGAG-GT-TTTAAACCTTCGCCAA-TGCTCAAATCTGGTAAAGC 2437
| |||||||| || || || || | |||||| | || |||||||||||||| |||
Sbjct 2588 GGAATGCCACTAA--TTTAGTGTACATGAACCTTAG-TAATTGCTCAAATCTGGTGGAGC 2644
Query 2438 -TCC-CTTTCTCGATTGGAAACCTTCAGAAGTTGCA-GACTTTGAACTTACGAGGATGCT 2494
||| |||||| || |||||||||||||||||||| || |||| ||| ||||||||
Sbjct 2645 TTCCTCTTTCT--ATAGGAAACCTTCAGAAGTTGCAGGA-ATTGATTTTAAAAGGATGCT 2701
Query 2495 CTAAGCTAGAGGTTCTTCCGGCCAACATCAAATTGGGATCTCTCTGGTC--ACTTGAT-C 2551
|||||||||||| |||||| ||||||||| |||| |||| | ||| | ||||| | |
Sbjct 2702 CTAAGCTAGAGGATCTTCCCATCAACATCAACTTGGAATCT-T-TGGACATACTTG-TGC 2758
Query 2552 TCACTGATTGCATAC-TGTTGAAAAGGTTTCCTGAGATCTCCACAAACGTTGGATTTATC 2610
||| ||||||| | | ||||||||||||||||||||||||| || |||||| || | ||
Sbjct 2759 TCAATGATTGC-TCCATGTTGAAAAGGTTTCCTGAGATCTCTACTAACGTTAGAGCTCTC 2817
Query 2611 TGGCTCAT-AGGAACCACAATAGAAGAAGTCCCT-TCATCAATCAAATCATGGTCTCGTC 2668
| ||| | |||||| ||||||||||||| ||| || || |||| |||||| | ||||
Sbjct 2818 TATCTC-TGTGGAACCGCAATAGAAGAAGTGCCTCTC-TCGATCAGGTCATGGCCCCGTC 2875
Query 2669 CCAATGAGGTGCAT-ATGTCATACAGTGAAAATCTCA--AGAACTTTCCTCATGCTT-TT 2724
|||| ||| | ||||||||| ||| ||||| | ||| || ||||||| || ||
Sbjct 2876 TTGATGAATTGC-TGATGTCATACTTTGATAATCT-AGTGGAA-TTCCCTCATG-TTCTT 2931
Query 2725 GACATCATCACACGGCTGCAAGTGACCAATACAGAAATACAAGAGGTTCCCCCA-TGGAT 2783
|||||||||||| ||| | ||| | || |||||||||||||||||| ||| | |||
Sbjct 2932 GACATCATCACAAATCTGGACTTGAGCGGTAAAGAAATACAAGAGGTTCCTCCACT-GAT 2990
Query 2784 CAAGA-AATTCTCTCGT-TTAACAG-TACTCAAACTCAAGGGATGCAAAAAGTTGGTATC 2840
||||| || | |||||| || ||| ||||| ||||||||| | || |||| |||||||
Sbjct 2991 CAAGAGAA-TATCTCGTCTT--CAGACACTCATACTCAAGGGGTACAGAAAGGTGGTATC 3047
Query 2841 ACTCCCACAGATTCCAGATTCCATCTC-TGACATAGATGCAGAAGATTGTGAGTCCCTGG 2899
||||||||||||||||||||| | || || ||||| ||||||||||||||| |||
Sbjct 3048 ACTCCCACAGATTCCAGATTCTTTAAAATGG-ATTGATGCTGAAGATTGTGAGTCCTTGG 3106
Query 2900 AGAGACTAGATTGCTCCTTTCACAATCCAAATATTTGGCTCAAATTTGCTAAGTGCTTCA 2959
||||||||||||||||||||||||||||| | ||| ||| |||| ||||||||| |
Sbjct 3107 AGAGACTAGATTGCTCCTTTCACAATCCAGAGATTACTCTCTTCTTTGGTAAGTGCTTTA 3166
Query 2960 AACTGAATCAAGAAGCCAGAGACCTCATCATCCAGACACCAACTAGTA-AATCTGCGGTC 3018
|||| ||||||||||| |||||||| |||||||||||||| |||| | || || |||
Sbjct 3167 AACTTAATCAAGAAGCAAGAGACCTAATCATCCAGACACCGACTAA-ACAA---GCAGTC 3222
Query 3019 TTACCCGGCAGAGAAGTGCCTGCATACTTCACTCACCAATCTACTACTGGAGGTTCCTTG 3078
||||| || ||||| |||||||||||||||||||||| | | | | || ||||| |||
Sbjct 3223 TTACCTGGTAGAGAGGTGCCTGCATACTTCACTCACCGAGCGAGTG--GG-GGTTCATTG 3279
Query 3079 ACAATCAAGCTGAACGAGAAGCCTCTTCCTACATCCATGCGGTTTAAGGCTTGCATTTTG 3138
||||| ||| |||| |||| ||||||||||||||| ||| | | |||||||||||| |||
Sbjct 3280 ACAATTAAGTTGAATGAGAGGCCTCTTCCTACATCTATGAGATATAAGGCTTGCATCTTG 3339
Query 3139 CTGGTTCATAAAGGTGACAATGAG-GAAAACTGGATGGATAAAAATGACTGCTATGTT-- 3195
|| |||| || |||||| ||| | | | || || || | ||||| | | |||||
Sbjct 3340 CTAGTTCGTATTGGTGACTATG-GCGCTCA-TG-ATAGAGACAAATGGTTAC-ATGTTGC 3395
Query 3196 TTT---TGTaaa----a-aa-aGTAGG-CAACATT-TACATCCAGTTTTAGA-AGAGCAT 3243
||| ||| | | || | | || || |||| || || ||| ||| | |||||||
Sbjct 3396 TTTCGGTGTTAGGTCTACAACATTGGGGCA-CATTATATATTCAGGCTTA-ACAGAGCAT 3453
Query 3244 GTGTACGTATTTGAAGTCGAAGCAGATG-TGACTTCCAGCGAGCTTGTCTTTGAGTTCAA 3302
||||| ||| ||| |||||| ||| | |||||||||||||||||||||||||||||||
Sbjct 3454 CTGTACACATTCGAAATCGAAG-AGAAGGTGACTTCCAGCGAGCTTGTCTTTGAGTTCAA 3512
Query 3303 GATC-AGGA-G-TAAGAATTGGAAGATAAAAGAATGTGGG 3339
| || || | | ||| | |||||||| |||||| |||
Sbjct 3513 GGTCGAGAACGGTAACCACTGGAAGATTGGAGAATGCGGG 3552
> AT5G38340.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:15320507-15324061 FORWARD LENGTH=3180
Length=3180
Score = 760 bits (411), Expect = 0.0
Identities = 1557/2088 (75%), Gaps = 167/2088 (8%)
Strand=Plus/Plus
Query 191 ATGTGTTTCCAAGTTTCCGA-GGGGAAGATGTCCGTAGAGA-CTTTCTTAGTCACATTCA 248
|||| ||||| ||||||| | || | |||||| || | | | ||||||| |||||| |
Sbjct 173 ATGTCTTTCCGAGTTTCC-ACGGAGCAGATGTTCGCA-AAACCTTTCTTTCTCACATGC- 229
Query 249 T-ATGGAGTTTCAAA-GAATGGGAATCACACCATTCATTGATAATGAGATCGAGAGAGGA 306
| | ||| |||||| ||| ||||||| ||||||||||||||||| ||| || ||||
Sbjct 230 TAAAAGAG-TTCAAACGAAAGGGAATCGTTCCATTCATTGATAATGATATC--GACAGGA 286
Query 307 -CAA-TCCATCGGTCCCGAACTCATTCG-AGCAATTAGAGAATCCAAGATCGCAATTATC 363
||| || || ||||| || ||| || ||| || |||| ||| ||||||||||| ||
Sbjct 287 GCAAGTCTATTGGTCCTGAGCTC-GACGAAGCTATCAGAGGATCAAAGATCGCAATCGTC 345
Query 364 TTGCTGTC-AAGAAACTACGCTTCTTCGAGC-TGGTGTCTTGACGAATTGGCGGAGATTA 421
|||| || ||| ||||| |||||||| | | ||||| || |||| |||| |||||| |
Sbjct 346 ATGCTCTCAAAG-AACTATGCTTCTTC-ATCATGGTGCCTAAACGAGTTGGTGGAGATCA 403
Query 422 TGAAGTGCAGGGAAGAATTGGGTCAAACAGTTTTGGCTGTTTTCTATAAAGTGGATCCAT 481
||| || || |||| ||| ||||||||| || | |||||||| || || |||
Sbjct 404 CGAAATGTAGAAAAGATTTGAATCAAACAGTGATGACCATTTTCTATGGCGTTGACCCAA 463
Query 482 CTGATGTAAAGAAGCTGACCGGAGATTTTGGAAAAGTCTTCaaaaaaaCATGTGCCGGTA 541
| ||||||||||||| ||| ||||| ||||| || |||||| ||| ||| |||| |||
Sbjct 464 CAGATGTAAAGAAGCAGACAGGAGAGTTTGGGAAGGTCTTCGAAAGAACTTGTGAAAGTA 523
Query 542 AAACAAAAGAGCACGTTGGGAGATGGAGACAAGCTTTGGCAAAT-GT-C-GCCACAATCG 598
||||| | ||||| ||| || ||||||| ||| ||||| || || | || |||||||
Sbjct 524 AAACAGAGGAGCAGGTTAAGACATGGAGAGAAGTTTTGG---ATGGTGCGGCAACAATCG 580
Query 599 CCGGTTACCATTCGAC-CAACTGGGATAATGAAGCTACCATGATTAG-AAATATCGCTAC 656
| || | |||| | | || ||||||||||||||| | ||||||| | ||| || | |
Sbjct 581 CTGGAGAGCATT-GGCACATCTGGGATAATGAAGCGAGCATGATT-GAAAAAATTTCCAT 638
Query 657 TGATATATCCAACAAGTTGAATAATTC-TGCCTCA---TCAAGTGATTTTGATGGGTTGG 712
||| | || ||| | || ||| || | ||||| ||||| |||||||| | |||
Sbjct 639 TGACGTTTCAAAC-A-TT-CTTAA-TCGTTCCTCACCCTCAAGAGATTTTGACGATTTGA 694
Query 713 TTGGGAT-GACTGCTCAT-TTGAAGAAGATGGAACCATTGTT-ATGCCTAGACTC-AGAT 768
||||||| || |||||| | ||| || ||| || | ||||| | ||||| |||| | ||
Sbjct 695 TTGGGATGGA-AGCTCATATGGAA-AAAATGAAATCGTTGTTGA-GCCTACACTCTA-AT 750
Query 769 GAAGTGAGGATGATTGGGATTTGGGGTCCTTCTGGGATTGGGAAGACGACCATCGCCAGA 828
||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct 751 GAAGTGAAGATGATTGGGATTTGGGGTCCTTCTGGGATTGGGAAGACCACCATTGCAAGA 810
Query 829 GT-TGTATACAACAAACTCTCTAGC-AGTTTTCAACTGAGTGTCTTTATGGA-ATCTATC 885
|| | |||| ||| | ||| || | |||| | |||||||||||||||| | |||
Sbjct 811 GTCT-TATATAACCGTTTTTCTGGCGA-TTTTGGATTGAGTGTCTTTATGGACAA-TATT 867
Query 886 GAAGCAAA--AT--ATACAAGACCA-TG--TTCCGATGACTATAGTGCCAAGTTGCAGTT 938
||| | || ||||||||||| || ||| || || || ||||| |||||||| ||
Sbjct 868 AAAG-AGTTGATGCATACAAGACCAGTGGGTTCTGACGATTACAGTGCAAAGTTGCACTT 926
Query 939 ACA-ACAGCAGTTTATGTCTCAA-ATAACCAACCAGA-GTG-GTATGAAGATTTCTCATT 994
||| | | ||||| ||||| | | ||||||||||| | | | | | |||||| ||||||
Sbjct 927 ACAGA-ACCAGTTAATGTC-CGAGATAACCAACCATAAG-GAG-ACCAAGATTACTCATT 982
Query 995 TAGGTGTTGTTCAAGATAGGCTAAAAGACAAGAAAGTTCTTGTTGTTCTTGATGGTGTGG 1054
|||| ||||| | |||||| | || ||||| ||||| ||| |||| |||||| | | |
Sbjct 983 TAGGAGTTGTACCTGATAGGTTGAAGGACAATAAAGTGCTTATTGTCCTTGATAGCATTG 1042
Query 1055 A-CAAGTCAATGCAACTAGACGCCATGGCAAAAGAAACTTGGTGGTTTGGTCCTGGGAGT 1113
| ||| ||||| |||||||| || || |||||||||||| ||||| ||||||||||||
Sbjct 1043 ATCAA-TCAATACAACTAGATGCTATCGCAAAAGAAACTCAATGGTTCGGTCCTGGGAGT 1101
Query 1114 CAGATTATCATCACAGCACAAGATCGAAAGATTTTTAG-GGAACATGGGATTAACCATAT 1172
| ||||||||||||| | ||||| | ||| | || | | || ||||| || ||| ||||
Sbjct 1102 CGGATTATCATCACAACGCAAGACCAAAA-ACTTCTGGAGGCACATGACATCAACAATAT 1160
Query 1173 ATACAAGGTGG-GTTTTCCATCAAC-TGATGAGGCCCTTCAAATCTTGTGCACATATGCT 1230
|||||||||| |||| ||||||| | |||| || |||||||||| || || ||||||
Sbjct 1161 TTACAAGGTGGAGTTT-CCATCAAAAT-ATGAAGCTTTTCAAATCTTTTGTACGTATGCT 1218
Query 1231 TTTGGTCAAAAATCCCCTAAACATGGTTTTGAAGAA-CTTGCTTGGGAAGTTACAAATCT 1289
||||||||||| | ||||||| |||||||||| ||| |||||||||||||||||| | ||
Sbjct 1219 TTTGGTCAAAATTTCCCTAAAGATGGTTTTGA-GAAGCTTGCTTGGGAAGTTACAGACCT 1277
Query 1290 TGCT-GGTGAACTCCCTTTGGGACTAAGGGTTATGGGCTCTTATTTTCGGGGAATGTCTA 1348
| | |||||||| || ||||||||||| ||||||||||| | || || |||||||||
Sbjct 1278 TT-TAGGTGAACTACCATTGGGACTAAGAGTTATGGGCTCCCACTTCCGAAGAATGTCTA 1336
Query 1349 AG-ATGGAGTGGACGAAA--GCACTACCAAGGTTAAGGAGTAGCCTTGACGCTGATATTC 1405
|| ||| | ||| | || ||| |||||||||||| || | ||||||| ||| ||||||
Sbjct 1337 AGGATG-ATTGG--GTAATTGCATTACCAAGGTTAAAGACTCGCCTTGATGCTAATATTC 1393
Query 1406 TTAGCATTTTGAAGTTCAGCTATGATGCCTTAGATGAC-GAAGACAAATATTTGTTTCTT 1464
|||||||||||||| || || ||||| ||| | | ||||| ||| |||| || |||
Sbjct 1394 AAAGCATTTTGAAGTTTAGTTACGATGCTTTATCTC-CTGAAGATAAAGATTTATTCCTT 1452
Query 1465 CATATAGCTTGC-TTCTTCAATTATAAAAGGATTGG-GAGAGTGGAAGAGTATCTTGCAG 1522
|||||||| ||| || ||||| || || | | | | || ||| ||||| ||||||||
Sbjct 1453 CATATAGCATGCCTT-TTCAACAATGAA-GAAATAGTGAAAGTCGAAGATTATCTTGCTT 1510
Query 1523 -AGACGTTCTTGGATGTGAGTCATCGGCTTAATGGCTTAGCTGAAAAATCGCTCAT--AT 1579
||| |||||||||| ||| ||| ||||| | ||||||||| ||||| ||||| ||
Sbjct 1511 TAGAT-TTCTTGGATGCGAGGCATGGGCTTCACCTCTTAGCTGAGAAATCTCTCATTGAT 1569
Query 1580 CT--A---TG--AACGACGGAGTGATAATCATGCATGATCTGCTAGT-CAAACTAGGTAT 1631
|| | || ||| || |||| ||| |||||| |||| |||| ||| | ||||
Sbjct 1570 CTCGAAGGTGTTAACTACAAAGTGCTAAAAATGCATAATCTACTAGAACAAT-TGGGTAA 1628
Query 1632 AGACATTGTCCGT-A--A------ACAGT-CTCT-TC-GTGAGCCTGGACAA-CGACTA- 1677
||| ||||||||| | | ||| ||| || ||||||||| | || || | |
Sbjct 1629 AGAAATTGTCCGTTATCATCCGGCACACCACTCAATCCGTGAGCCTGAA-AAGCGTC-AG 1686
Query 1678 TTTTTGGTTGATGC-ACGAGAAATTTGTGAAGTACTCAATCTTGATGCGAATGGC-AGTA 1735
|||||||||||| | | ||| ||||||||||||||| | |||| | | || ||||
Sbjct 1687 TTTTTGGTTGATACTAA-AGATATTTGTGAAGTACTCGC-C--GATG-GCACGGGTAGTA 1741
Query 1736 GAAGTGTTATAGGCATAAATTTCAACTTTGGTGGGAATAGGATCAAGGAAAAGTTACATA 1795
|||| ||| ||| ||| |||| |||| | | || |||| ||| | ||| |||
Sbjct 1742 AAAGTATTAAAGGTATATGTTTCGACTTAGAT---AACCT-ATCAGGGAGA--TTAAATA 1795
Query 1796 TAAGTGAGAGGGCCTTTCAAGGAATGTCTAATCTCCAATTCTTAAGAGT-CAAAGGGAAT 1854
|||||||||| || ||| |||||||| |||| || ||||||||||||| | || ||
Sbjct 1796 TAAGTGAGAGAGCTTTTGAAGGAATGACTAACCTTAAATTCTTAAGAGTTCTGAGAGACC 1855
Query 1855 -AA-CAATACAATAC-ATCT-ACCGCACGGTTTAGAGTATATATCTC-GTAAACTTCGAT 1909
|| | | | | | | || |||||| |||||| | ||| || || | |||||| |||
Sbjct 1856 GAAGCGAGA-AGTTGTA-CTTACCGCAAGGTTTAAATTATCTACCTAAG-AAACTTAGAT 1912
Query 1910 TACTGGACTGG-ACTTATTTTCCGATGACATGTTTGCCTCCTA--TTTTCAACA-CGGAC 1965
|| | || ||| ||| |||||||||||| | |||||||| | | |||| ||| || ||
Sbjct 1913 TAATAGAATGGGACT-ATTTTCCGATGAAAAGTTTGCCTTCAAACTTTTGTACAACGTAC 1971
Query 1966 TTCCTTGTTGAAC-TAGACATGCGTTGCAGCAAACTTGAGAAGTTGTGGGAAGGAATTAA 2024
| | || ||| || | ||||| ||||||||||||||||| |||||||||| ||
Sbjct 1972 --C-TAGTC-AACCTACATATGCGGAAAAGCAAACTTGAGAAGTTATGGGAAGGAA--AA 2025
Query 2025 -A-CCGCTTCCAAATCTCAAGCGGATGGATTTGAGTT-CGTCTCTCCTCTTAAAGGAGCT 2081
| || ||| || || ||| ||||| |||| ||| | || | ||||||||||
Sbjct 2026 CAGCCACTTGGTAACCTGAAGTGGATGAATTTAAGTAAC-TCGAGAAACCTAAAGGAGCT 2084
Query 2082 TCCTGATCTCTCAACTGCCACCAATCTTCGGACATT-GAATCTTCGTTAT-TGCTCAAGT 2139
|||||||||||||| || || || |||| | ||| |||||| | || ||||| ||
Sbjct 2085 ACCTGATCTCTCAACAGCTACTAAACTTCA-AGATTTGAATCT-CACTAGATGCTCCAG- 2141
Query 2140 CT-GATG-A-ATCTCCCTTCCTCTATTGGGAATGCCACTAATCTCGAG 2184
|| | || | || ||| ||| |||||||| || |||||||||| |||
Sbjct 2142 CTTGGTGGAGAT-TCCTTTC-TCTATTGGAAACACCACTAATCTTGAG 2187
> AT3G25510.1 | Symbols: | disease resistance protein (TIR-NBS-LRR
class), putative | chr3:9260838-9268797 REVERSE LENGTH=5946
Length=5946
Score = 479 bits (259), Expect = 8e-134
Identities = 822/1080 (76%), Gaps = 93/1080 (9%)
Strand=Plus/Plus
Query 2097 TGCCACCAATCTTCGGACA-TTGA-ATCTTCGTTATTGCTCAAGTCTGA-TGAATCTCCC 2153
|||||| |||| || || | || | | || ||| | ||||||||||| | || | ||||
Sbjct 2553 TGCCACTAATC-TC-GAGATTTTAGACCTCCGTAAATGCTCAAGTCT-AGTGGAGATCCC 2609
Query 2154 TTCCTCTATTGGGA-ATGCCACTAATC--TCGAGTTATTATATCTCGGTGGATGCTCAAG 2210
| | |||||| ||| ||| |||||||| | ||| |||| |||| | |||||||||||
Sbjct 2610 TACTTCTATT-GGACATGTCACTAATCTGTGGAG--ATTAGATCTTAGCGGATGCTCAAG 2666
Query 2211 TCTGGTGGAGC-TCCCTTCCTCTATTGGGAATC-TCA-TCAATCTAAAAGAATTGGATCT 2267
| | ||||| | |||| || ||| || |||| | ||| | || || ||| ||| ||||
Sbjct 2667 TTTAGTGGAACTTCCC-TCATCTGTT-GGAAACATCAGTGAA-CTCCAAGTGTTGAATCT 2723
Query 2268 -TAGCAGTTTATCATGTCTAGTGGAGC-TCCCT-TTCTCGATTGGGA-AT-CTCATC-AA 2321
| | | ||| ||| ||| ||| ||||| |||| || ||| || | || | ||
Sbjct 2724 CCA-TAACTGCTCAAATCTGGTGAAGCTTCCCTCTTCT---TTTGGACATGC-CA-CTAA 2777
Query 2322 TCT-AAAAGTATTGA-ATCTTAGCAGTTTATCATGTCTAGTGGAGC-TCCCTTTC-TCGA 2377
||| || ||| | |||||||| | | ||| || ||||||| | |||| || || |
Sbjct 2778 TCTGTGGAG-ATT-AGATCTTAGCGGATGCTCAAGTTTAGTGGAACTTCCC--TCATCTA 2833
Query 2378 TTGGAAATGCCACCAACCTTGAGGTTTTAAACCTTCGCCAA-TGCTCAAATCTGGTAAAG 2436
||||||| ||| || || | | | |||||| | ||| |||||||||||||| |||
Sbjct 2834 TTGGAAACATCACAAATCTCCAAGAGCTGAACCTTTG-CAACTGCTCAAATCTGGTGAAG 2892
Query 2437 C-TCCCT-TTCTCGATTGGAAACCTTCA-GAAGTTGCAGACTTTGAACTTACG-AGGATG 2492
| ||||| |||| |||||||||||||| | ||| |||||| | || | | ||||
Sbjct 2893 CTTCCCTCTTCT--ATTGGAAACCTTCATCTA-TTGTTCACTTTG-AGTTTGGCAAGATG 2948
Query 2493 CTC-TAAGCTAGAGGTTCTTCCG-GCCAACATCAAATTGGGATCTCTCTGGTC-ACTTGA 2549
| | ||| |||||| ||||||| | ||| ||||| ||| |||||| || | ||||||
Sbjct 2949 C-CAAAAGTTAGAGGCTCTTCCGAG-CAATATCAACTTGAAATCTCT-TGAACGACTTGA 3005
Query 2550 TCTCACTGATTGCAT-ACTGTTGAAAAGGTTTCCTGAGATCTCCACAAACGTTGGATTTA 2608
|||||| |||||| | | ||| ||||| ||||||||||| ||||||||| ||| ||
Sbjct 3006 TCTCACCGATTGC-TCGCAGTTTAAAAGTTTTCCTGAGATTTCCACAAACATTGAATGCC 3064
Query 2609 TCTGGC-TCATAGGAACCACAATAGAAGAAGTCCCTTCATCAATCAAATCATGGTCTCGT 2667
||| | | || |||||| || |||||||||| |||||||||||||| || |||||| |
Sbjct 3065 TCTATCTTGAT-GGAACCGCAGTAGAAGAAGTGCCTTCATCAATCAAGTCTTGGTCTAGA 3123
Query 2668 CCCAATGAGGTGCATATGTCATACAGT-GAAAATCTCAA-GAACTTTC-CTCATGCTT-T 2723
| || || | |||||||||||||| | ||||| ||||| ||| ||| | |||| || |
Sbjct 3124 CTCACTGTGTTGCATATGTCATAC-TTCGAAAAACTCAAGGAA--TTCTCGCATG-TTCT 3179
Query 2724 TGACATCATCACACGGCT-GCAAGTGACCAATACAGAAATACAAGAGGTTCCCCCATGGA 2782
|||||||| || |||| | || | | | | ||| |||||||| ||| | |||||||
Sbjct 3180 AGACATCATAACGTGGCTAG-AA-T-TCGGAGA-AGATATACAAGAAGTTGCTCCATGGA 3235
Query 2783 TC-AAGAAATTCTCTCGTTTAACA-GTACTCAAACTCAAGGGATGCAAAAAG-TTGGTAT 2839
|| |||||| |||||||| | ||| | ||| | |||| | ||||| |||| || |||
Sbjct 3236 TCAAAGAAA-TCTCTCGTCT-ACATGGACTTAGACTCTACAAATGCAGAAAGCTT-TTAT 3292
Query 2840 CACTCCCACAGATTCCAGATTC-CATCTCTGA-CATAGATGCAGAAGATTGTGAGTCCCT 2897
||||||||||| ||||||| || | ||||| | |||| |||| |||| |||||||||| |
Sbjct 3293 CACTCCCACAGCTTCCAGAATCTC-TCTCT-ATCATAAATGCTGAAGGTTGTGAGTCCTT 3350
Query 2898 GGAGAGACTAGATTGCTCCTTTC-ACAATCCAAAT-A-T-TTGGCTCAAATTTGCTAAGT 2953
||||| ||||||||||| ||| | ||||||| | | | || || || ||||||||||
Sbjct 3351 GGAGACACTAGATTGCT-CTTACAACAATCC-CTTGAGTCTT--CTTAATTTTGCTAAGT 3406
Query 2954 GCTTCAAACTGAATCAAGAAGCCAGAGACCTCATCATCCAGACACCAACTAGTAAATC-T 3012
|||||||||||||||||||||| |||||| |||||||||||| ||| || ||||| | |
Sbjct 3407 GCTTCAAACTGAATCAAGAAGCGAGAGACTTCATCATCCAGATACCGACCAGTAA-TGAT 3465
Query 3013 GCGGTCTTACCCGGCAG-AGAAGTGCCTGCATACTTCACTCACCAATCTACTACTGGAGG 3071
|||||||||||||| | |||||||||||||||||||||||||| | ||||||||||||
Sbjct 3466 GCGGTCTTACCCGGT-GCAGAAGTGCCTGCATACTTCACTCACCGAGCTACTACTGGAGC 3524
Query 3072 TTCCTTGACAATCAAGCTGAACGAGAAGCCTCTTCCTACATCCATGCGGTTTAAGGCTTG 3131
||||||||| |||||| | || |||| |||| || ||||||||||| | |||||||||||
Sbjct 3525 TTCCTTGACCATCAAGTTAAATGAGAGGCCTATTTCTACATCCATGAGATTTAAGGCTTG 3584
> AT3G44480.1 | Symbols: RPP1, cog1 | Disease resistance protein
(TIR-NBS-LRR class) family | chr3:16090564-16096359 REVERSE
LENGTH=4038
Length=4038
Score = 440 bits (238), Expect = 4e-122
Identities = 925/1246 (74%), Gaps = 90/1246 (7%)
Strand=Plus/Plus
Query 1938 ATGTTTGCCTCCTA-TTTTCAA-CACGGACTTCCTTGTTGAACTAGACATGCGTTGCAGC 1995
|||||||||| | | |||| || | |||| || || || ||||| || ||||||| ||||
Sbjct 2185 ATGTTTGCCTTCAACTTTT-AATC-CGGAGTTTCTGGTCGAACTTGATATGCGTTCCAGC 2242
Query 1996 AAACTT-GAGAAGTTGTGGGAAGGAATTAAACCGCTTCCAAATCTCAAGCGGATGGATTT 2054
|| ||| | |||| | |||||||||| ||||| ||| |||||||||| ||||||||||
Sbjct 2243 AATCTTCG-GAAGCTATGGGAAGGAACTAAACAACTTAGAAATCTCAAGTGGATGGATTT 2301
Query 2055 GAGTTCGTCT-CTCCTCTTAAAGGAGCTTCCTGATCTCTCAACTGCCACCAATCTTCG-- 2111
||||| ||| | ||| ||| |||||||| |||| |||||||| || |||| |||
Sbjct 2302 GAGTTATTCTAGTTATCTGAAA-GAGCTTCCCAATCTTTCAACTGCAACTAATC-TCGAA 2359
Query 2112 GACATTGAATCTTCGTTATTGCTCAAGTCTGA-TGAATCTCCCTTCCTCTATTGGGAATG 2170
|| ||| || ||| | ||||||||||| | | || | ||||| ||||||||| | ||
Sbjct 2360 GA-ATTAAAGCTTAGAAATTGCTCAAGT-TTAGTGGAGCTCCCCTCCTCTATT-GAAAAA 2416
Query 2171 C-CACTAATCTCGAGTTATTATATCTCGGTGGA-TGCTCAAGTCTGGTGGAGCTCCCTTC 2228
| ||| | |||| | ||||| |||| | | || || ||||| | | |||| || |
Sbjct 2417 CTCACGAGTCTCCAAATATTAGATCT-TGAAAATTGTTCGAGTCTTGAGAAGCT-CC--C 2472
Query 2229 CTCTATTGGGAATCTC-ATC-AATCTAAAAGAATTGGATCT-TAGCAGTTTATCATGTCT 2285
| |||| | |||| | | | || || |||||| | || | | || ||| ||||
Sbjct 2473 CGCTATCGAGAAT-GCGA-CTAAGCTCCGTGAATTGAAGCTCCA-AAATTGCTCAAGTCT 2529
Query 2286 AGTGGAGCTCCCT-TTCTCGATTGGGAATCT--CATC-AATCTAAAAG-TATTGAATCTT 2340
| | ||||||||| || || ||| |||| || || | ||||| ||| ||||||| ||
Sbjct 2530 AATAGAGCTCCCTCTT-TCTATT-GGAA-CTGCCA-CAAATCT-GAAGCAATTGAATATT 2584
Query 2341 AGCAGTTTATCATGTCTAGTGGAGCTCCCTTTCTCGATTGGAAATGCCACCAACCTTGAG 2400
||| | | ||| |||| ||| | ||||| | ||| |||||| || ||| | || ||
Sbjct 2585 AGCGGATGCTCAAGTCTCGTGAAACTCCCATCCTCAATTGGAGATATCACTGATCTCGAA 2644
Query 2401 GT-TTTAAACCTTCGCCAA-TGCTCAAATCTGGTAAAGCTCCCTTTCTCGATTGGAAACC 2458
|| ||| | | | | || ||||||| |||||| | ||| |||| ||| || |||||||
Sbjct 2645 GTGTTT-GATC-TATCTAACTGCTCAAGTCTGGTGACGCTTCCTTCCTCTATAGGAAACC 2702
Query 2459 TTCAGAA-GT-TGCAGACTTTGAACTTA--CGAGGATGCTCTAAGCTAGAGGTTCTTCCG 2514
|||| || | |||| | || || ||| |||||||||| |||||||||| ||||||
Sbjct 2703 TTCAAAACTTGTGCA-A-GTT-AA-TTATGAGAGGATGCTCAAAGCTAGAGGCTCTTCCA 2758
Query 2515 GCCAACATCAAATTGGGATCTCTCTGGT-CACTTGATCTCACTGATTGCATACT--GTTG 2571
||||||||| ||| ||||||| | | ||||| ||||||| |||||| | || ||||
Sbjct 2759 ATCAACATCAACTTGAAATCTCTC-GATACACTTAATCTCACAGATTGC-T-CTCAGTTG 2815
Query 2572 AAAAGGTTTCCTGAGATCTCCACAAACGTTGGATTTATCTGGCTCATAGGAACCACAATA 2631
||||| |||||||||||||||||| || || | || || | | |||||| |||||
Sbjct 2816 AAAAGTTTTCCTGAGATCTCCACACACATTTCAGAGCTCAGGTTAAAAGGAACTGCAATA 2875
Query 2632 GAAGAAG-TCCCTTCATCAATCAAATCATGGTCTCGTCCCAATGAGGTGCATATGTCATA 2690
|||||| |||||| || |||| || ||||||| || ||| | || || |||||
Sbjct 2876 AAAGAAGTTCCCTT-GTCGATCATGTCGTGGTCTCCTCTTGCTGACTTTCAGATTTCATA 2934
Query 2691 CAGTGAAAATCTCA-AGAACTTTCCTCATGCTTTTGACATCATCAC-ACGGCTGCAAGTG 2748
| ||||| |||| ||| || || |||||||||||||||||||| | |||||| ||
Sbjct 2935 CTTTGAAAGCCTCATGGAA-TTCCCGCATGCTTTTGACATCATCACGA-AGCTGCATTTG 2992
Query 2749 ACCAATACAGAAATACAAGAGGTTCCCCCATGGATCAAGA-AATTCTCTCGTTTAACAGT 2807
| | | | ||| |||||||| ||||| |||||| |||||| || | |||||||| || ||
Sbjct 2993 AGC-A-A-AGATATACAAGAAGTTCCTCCATGGGTCAAGAGAA-TGTCTCGTTT-AC-GT 3046
Query 2808 -A-CTCAAACTCAAGGGA-TGCAAAAAGT-TGGTATCACTCCCACAGA-TTCCAGATTCC 2862
| || | ||||| | ||||| || | ||||||||||||| || | || ||||||||
Sbjct 3047 GATCTTAGTCTCAA-CAACTGCAATAA-TCTGGTATCACTCCCCCA-ACTTTCAGATTCC 3103
Query 2863 ATCT-CTGACATAGATGCAGA-AGATTGTGAGTCCCTGGAGAGACTAGATTGCTCCTTTC 2920
| | | ||||| ||||||| | ||||| ||||||| |||||||| ||||| | ||||
Sbjct 3104 CT-TGATTACATATATGCAGATA-ATTGTAAGTCCCTCGAGAGACTGGATTGTTGCTTTA 3161
Query 2921 ACAATCCAAATATTTGGCTCAAATTT-GCTAAGTGCTTCAAACTGAATCAAGAAGCCAGA 2979
|||||||| | || | ||| |||| | || |||||||||||||||||||||||||||
Sbjct 3162 ACAATCCAGAGATCCGTCTC-TATTTCCCCAAATGCTTCAAACTGAATCAAGAAGCCAGA 3220
Query 2980 GACCTCATCATCCAGACACCAACTAGTAAATCTGCGGTCTTACCCGGCAGAGAAGTGCCT 3039
|| |||||||| | ||| | || ||| | |||| | || || || | | ||||||||
Sbjct 3221 GATCTCATCAT---G-CAC-A-CTTGTATAGATGCGATGTTTCCAGGTACACAAGTGCCT 3274
Query 3040 GCATACTTCACTCACCAATCTACTACTGGAGG-TTCCTTGACAATCAAGCTGAACGAGAA 3098
|| | ||||| ||| | | ||||| |||| || |||||||| ||||||| |||| |||
Sbjct 3275 GCCTGCTTCATTCATCGAGCTACTTCTGG-GGATTCCTTGAAAATCAAGTTGAAGGAGTC 3333
Query 3099 GCCTCTTCCTACATCCATGCGGTTTAAGGCTTGCATTTTGCTGGTT 3144
||||||||||||| || || | ||||||||||| || |||| |||
Sbjct 3334 GCCTCTTCCTACAACCTTGAGATTTAAGGCTTGTATCATGCTTGTT 3379
> AT3G44630.3 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16195984-16200595 FORWARD LENGTH=4031
Length=4031
Score = 403 bits (218), Expect = 5e-111
Identities = 924/1253 (74%), Gaps = 95/1253 (8%)
Strand=Plus/Plus
Query 1938 ATGTTTGCCTCCTA-TTTTCAA-CACGGACTTCCTTGTTGAACTAGACATGCGTTGCAGC 1995
|||||||||| ||| |||| || | |||| || || || |||||||| ||||||||||||
Sbjct 2244 ATGTTTGCCTTCTACTTTT-AATC-CGGAGTTTCTCGTCGAACTAGATATGCGTTGCAGC 2301
Query 1996 AAACTT-GAGAAGTTGTGGGAAGGAATTAAACCGCTTCCAAATCTCAAGCGGATGGATTT 2054
|| ||| | |||| | |||||||||| ||||| ||| |||||||||| ||||||||||
Sbjct 2302 AAGCTTCG-GAAGCTATGGGAAGGAACTAAACAACTTAGAAATCTCAAGTGGATGGATTT 2360
Query 2055 GAGTTCGTCT-CTCCTCTT-AAAGGAGCTT-CCTGATCT-CTCAACTGC-CACCAATCTT 2109
|||| ||| | || ||| |||||| ||| ||| | || | ||||| |||
Sbjct 2361 GAGTGATTCTAGAGAT-TTGAAA-GAGCTTCCCTCCTCTATTGAAAAACTCACCAGTCTC 2418
Query 2110 CGGACATTGA-ATCTTCGTTATTGCTCAAGTC-TGATGAATCTCCCTTCC-TCTATTGGG 2166
| | ||| | |||| || |||||||||||| || |||| ||||| || |||| |
Sbjct 2419 CAAATATT-AGATCTCCGGGATTGCTCAAGTCTTG-TGAAGCTCCC-ACCATCTA-T--C 2472
Query 2167 AATGCCACTAATCTCGAGTTATTATATCTCGGTGGA-TGCTCAAGTCTGGTGGAGCTCCC 2225
||||||| ||||||| || ||| | ||| | || ||| || | ||| |||| ||
Sbjct 2473 AATGCCAATAATCTCCAGGGATTGTCTCT-AACAAATTGTTCACGTGTTGTGAAGCT-CC 2530
Query 2226 TTCCTCTATTGGGAATCTCATC-AATCTAAAAGAATTGGATCT-TAGCAGTTTATCATGT 2283
|| |||||| |||| | | | ||||| | ||||| | || | | || ||| ||
Sbjct 2531 --CCGCTATTGAGAATGTGA-CTAATCTCCATCAATTGAAGCTCCA-AAATTGCTCAAGT 2586
Query 2284 CTAGTGGAGCTCCCT-TTCTCGATTGGGAATCT--CATCAATC--T-AAAAGTATTGA-A 2336
||| | ||||||||| || || ||| |||| || || ||||| | ||| | | || |
Sbjct 2587 CTAATAGAGCTCCCTCTT-TCTATT-GGAA-CTGCCAACAATCTTTGGAAA-T-TGGATA 2641
Query 2337 TCTTAGCAGTTTATCATGTCTAGTGGAGCTCCCTTTCTCGATTGGA-A-ATGCCACCAAC 2394
|| || | | | ||| |||| ||| | || || | ||| |||||| | ||| || ||
Sbjct 2642 TCAGAGGA-TGT-TCAAGTCTCGTGAAACTTCCATCCTCTATTGGAGATATG--ACTAAT 2697
Query 2395 CT-TGAG-GTTTTAAACCTTCGCCAA-TGCTCAAATCTGGTAAAGCTCCCTTTC-TCGAT 2450
|| || | ||| | | | | || |||||||||||||| |||| || ||| || ||
Sbjct 2698 CTCAAAGAG-TTT-GATC-TATCTAACTGCTCAAATCTGGTGGAGCTTCC-TTCTTCTAT 2753
Query 2451 TGGAAACCTTCAGAAGTTGCAGACT-TTGA-ACTTACGAGGATGCTCTAAGCTAGAGGTT 2508
|||||||||||| || ||| | | |||| | | | |||||||||| |||||||| |
Sbjct 2754 TGGAAACCTTCAAAAATTGTTTA-TGTTGAGAATGA-GAGGATGCTCAAAGCTAGAAACT 2811
Query 2509 CTTCCGGCCAACATCAAATTGGGATCTCTCTGGT-CACTTGATCTCACTGATTGCAT-AC 2566
||||| | |||||||| ||| ||||||| || |||||||||||| |||||| | |
Sbjct 2812 CTTCCAACAAACATCAACTTGATATCTCTC-CGTATACTTGATCTCACAGATTGC-TCGC 2869
Query 2567 TGTTGAAAAGGTTTCCTGAGATCTCCACAAACGTTGGATTTATCTGGCTCATAGGAACCA 2626
||||||||| ||||| |||||||||||| || || | || || | | ||||||
Sbjct 2870 AGTTGAAAAGTTTTCCCGAGATCTCCACACACATTTCAGAGCTCAGGTTAAAAGGAACTG 2929
Query 2627 CAATAGAAGAAGTCCCTTCATCAATCAAATCATGGTCTCGTCCCAATG-AGGTGCATATG 2685
||||| ||||||| |||| || |||| || |||||||||| || | || | |||
Sbjct 2930 CAATAAAAGAAGTTCCTTTGTCGATCACGTCGTGGTCTCGTCTTGCTGTATATG-AAATG 2988
Query 2686 TCATACAGTGAAAATCTCAA-GAACTTTCCTCATGCTTTTGACATCATCACACG-GCTGC 2743
|||||| ||||| || || ||| || || |||||| ||||||||||||| || || |
Sbjct 2989 TCATACTTTGAAAGCCTTAAGGAA-TTCCCGCATGCTCTTGACATCATCAC-CGACCTAC 3046
Query 2744 AAGTGACCAA-T-ACAGAAATACAAGAGGTTCCCCCATGGATCAAGA-AATTCTCTCGTT 2800
|| || | | ||| |||||||| ||||| |||||| |||||| || | |||||||
Sbjct 3047 TTTTG-GTAAGTGA-AGATATACAAGAAGTTCCTCCATGGGTCAAGAGAA-TGTCTCGTT 3103
Query 2801 TAACAGTACTC--AAACTCAAGGGA-TGCAAAAAGT-TGGTATCACTCCCACAGA-TTCC 2855
| || || ||| | |||||| | ||| || ||| |||||||||||||||| | ||||
Sbjct 3104 T-AC-GTGCTCTTAGACTCAA-CAACTGC-AATAGTCTGGTATCACTCCCACA-ACTTCC 3158
Query 2856 AGATTCCATCT-CTGACATAGATGCAGA-AGATTGTGAGTCCCTGGAGAGACTAGATTGC 2913
||||||| | | | ||||| ||||||| | ||||| ||||||| |||||||| |||||
Sbjct 3159 AGATTCCCT-TGATTACATATATGCAGATA-ATTGTAAGTCCCTCGAGAGACTGGATTGT 3216
Query 2914 TCCTTTCACAATCCAAATATTTGGCTCAAATTT-GCTAAGTGCTTCAAACTGAATCAAGA 2972
| |||| |||||||| | || | ||| |||| | || ||||||||||||||||||||
Sbjct 3217 TGCTTTAACAATCCAGAGATCCGTCTC-TATTTCCCCAAATGCTTCAAACTGAATCAAGA 3275
Query 2973 AGCCAGAGACCTCATCATCCAGACACCAACTAGTAAATCTGCGGTCTTACCCGGCAGAGA 3032
||||||||| |||||||| || ||| ||||| |||||| |||| | ||||| | | | |
Sbjct 3276 AGCCAGAGATCTCATCATGCACACATCAACTCGTAAATATGCGATGTTACCAAGTATACA 3335
Query 3033 AGTGCCTGCATACTTCACTCACCAATCTACTACTGGAGG-TTCCTTGACAATCAAGCTGA 3091
||||||||| | ||||| ||||| | ||||| |||| || || ||||| ||||||| |||
Sbjct 3336 AGTGCCTGCCTGCTTCAATCACCGAGCTACTTCTGG-GGATTACTTGAAAATCAAGTTGA 3394
Query 3092 ACGAGAAGCCTCTTCCTACATCCATGCGGTTTAAGGCTTGCATTTTGCTGGTT 3144
| ||| | ||||||||||| || || | ||||||||||| || |||| |||
Sbjct 3395 AGGAGTCGTCTCTTCCTACAACCTTGAGATTTAAGGCTTGTATCATGCTTGTT 3447
> AT3G03855.1 | Symbols: | pseudogene of disease resistance protein
| chr3:986948-990738 FORWARD LENGTH=3791
Length=3791
Score = 228 bits (123), Expect = 3e-58
Identities = 348/454 (77%), Gaps = 26/454 (6%)
Strand=Plus/Plus
Query 181 TGGACACACCATGTGTTTCCAAGTTTCCGA-GGGGAAGATGTCCGTAGAGA-C-TTTCTT 237
|||| |||| |||| || || || |||| | || | ||||||||| | | | | |||||
Sbjct 141 TGGATACACGATGTCTTCCCGAGCTTCC-ACGGTGCAGATGTCCGCA-A-ATCGTTTCTG 197
Query 238 AGTCACATTCAT-ATGGAGTTTCA-AAG-AATGGGAATCACAC-CATTCATTGATAATGA 293
||||||| || | | |||| ||| ||| || || ||| || |||||||||||||||
Sbjct 198 AGTCACACTC-TGAAGGAG-CTCAGAAGCAA-AGGTATC-GACTTATTCATTGATAATGA 253
Query 294 GATCGAGAGAGGACAATCCATCGGTCCC-GAACTCATTCGAGCAATTAGA-GAATCCAAG 351
||| ||||||| ||| ||||| ||| || |||| ||| | | | | ||| | |
Sbjct 254 TATCTTGAGAGGAGAATTTATCGG-CCCTGAGCTCAAAAAAGCGA-TCCATGGATCGAGG 311
Query 352 ATCGCAATTATCTTGCTGTC-AAGAA-ACTACGCTTCTTCGAGC-TGGTGTCTTGACGAA 408
|||| ||| ||||||| || || || | |||||||||||| | |||||||||||||||
Sbjct 312 CTCGCGATTGTCTTGCTCTCGAA-AAGA-TACGCTTCTTCG-TCGTGGTGTCTTGACGAA 368
Query 409 TTGGCGGAGATTATGAAGTGCAGGGAAGAATTGGGTCAAACAGTTTTGGCTGTTTTCTAT 468
|||||||||||||||||||||| ||||| || ||||||||||| |||| |||||||
Sbjct 369 TTGGCGGAGATTATGAAGTGCAAGGAAGCTTTTGGTCAAACAGTGATGGCCATTTTCTAC 428
Query 469 AAAGTGGATCCATCTGATGTAAAGAAGCTGACCGGAGATTTTGGAAAAGTCTTCaaaaaa 528
||||||||||| |||||||| |||||| |||||||| |||||| ||||||||| | ||
Sbjct 429 GAAGTGGATCCAACTGATGTAGAGAAGCAGACCGGAGGTTTTGGGGAAGTCTTCACAGAA 488
Query 529 aCATGTGCCGGTAAAACAAAAGAGCACGTTGGGAGATGGAGACAAGCT-TTGGCAAATGT 587
|| |||| ||||||||| ||| || ||| || |||||| |||||| ||| |||| ||
Sbjct 489 ACTTGTGAGGGTAAAACAGCTGAGGACATTGAGAAATGGAGTCAAGCTCTTG-CAAAAGT 547
Query 588 CGCCACAATCGCCGGTTACCATTCGACCAACTGG 621
|| || || | |||||| ||| | || ||||
Sbjct 548 GGCAACTGTCACTAGTTACCTTTCAAGCAGCTGG 581
> AT3G44400.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16045954-16049668 REVERSE LENGTH=3314
Length=3314
Score = 220 bits (119), Expect = 5e-56
Identities = 294/377 (78%), Gaps = 18/377 (5%)
Strand=Plus/Plus
Query 2777 CATGGATCAAGA-AATTCTCTCGTTTAAC-AGTACTCAAACTCAAGGGA-TGCAAAAAGT 2833
||||| |||||| || | |||||||| || || || | |||||| | ||||| || |
Sbjct 2414 CATGGGTCAAGAGAA-TGTCTCGTTT-ACGTGTTCTGACACTCAA-CAACTGCAATAA-T 2469
Query 2834 -TGGTATCACTCCCACAGA-TTCCAGATTCCATCT-CTGACATAGATGCAGA-AGATTGT 2889
||||||||||||| || | ||||||| ||| | | | ||||| ||||||| | |||||
Sbjct 2470 CTGGTATCACTCCCCCA-ACTTCCAGACTCCCT-TGATTACATATATGCAGATA-ATTGT 2526
Query 2890 GAGTCCCTGGAGAGACTAGATTGCTCCTTTCACAATCCAAATATTTGGCTCA-AATTTGC 2948
||||||| |||||||| || || | |||| |||||||| | ||| | || | | ||| |
Sbjct 2527 AAGTCCCTCGAGAGACTGGACTGTTGCTTTAACAATCCAGAGATTAGTCT-ATATTTTCC 2585
Query 2949 TAAGTGCTTCAAACTGAATCAAGAAGCCAGAGACCTCATCATCCAGACACCAACTAGTAA 3008
|| ||||||||||||||||||||||||||||| |||||||| || ||| | ||| ||
Sbjct 2586 CAATTGCTTCAAACTGAATCAAGAAGCCAGAGATCTCATCATGCACACATCGACTTCTAG 2645
Query 3009 ATCTGCGGTCTTACCCGGCAGAGAAGTGCCTGCATACTTCACTCACCAATCTACTACTGG 3068
|| |||| | |||||||| | | |||||||||| | ||||| ||||| | ||||| ||||
Sbjct 2646 ATTTGCGATGTTACCCGGTACACAAGTGCCTGCCTGCTTCATTCACCGAGCTACTTCTGG 2705
Query 3069 AGG-TTCCTTGACAATCAAGCTGAACGAGAAGCCTCTTCCTACATCCATGCGGTTTAAGG 3127
|| || ||||| ||||||| |||| ||| |||| |||||||| || || | |||||||
Sbjct 2706 -GGATTACTTGAAAATCAAGTTGAAGGAGTCGCCTTTTCCTACAACCTTGAGATTTAAGG 2764
Query 3128 CTTGCATTTTGCTGGTT 3144
|||| || |||| |||
Sbjct 2765 CTTGTATCATGCTTGTT 2781
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 167507422677
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5