BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg887655 Length=1392 Score E Sequences producing significant alignments: (Bits) Value AT5G35917.1 | Symbols: CYP79A3P | cytochrome P450, family 79, s... 1485 0.0 AT5G05260.1 | Symbols: CYP79A2 | cytochrome p450 79a2 | chr5:15... 1474 0.0 AT5G35920.1 | Symbols: CYP79A4P | cytochrome P450, family 79, s... 255 6e-67 > AT5G35917.1 | Symbols: CYP79A3P | cytochrome P450, family 79, subfamily A, polypeptide 3 pseudogene | chr5:14049123-14051128 FORWARD LENGTH=1473 Length=1473 Score = 1485 bits (804), Expect = 0.0 Identities = 978/1063 (92%), Gaps = 8/1063 (1%) Strand=Plus/Plus Query 6 CGACTCTACCCCAGTGTTTGTGTTTATTCTAGGTTTGCTTCTCCTTA-CATTAACTATGA 64 |||||||||| || || ||| |||||| |||||||||||||||| || ||||||| |||| Sbjct 9 CGACTCTACCTCAATGCTTGCGTTTATCCTAGGTTTGCTTCTCC-TATCATTAACAATGA 67 Query 65 AGCGTAAGGAGACGAACAAAACCATGATATTCATTTGCCACACGAGAAACCTCTCTCTCC 124 ||||||| |||||||| ||||||||| || | | | |||||||||||||||||||||| | Sbjct 68 AGCGTAAAGAGACGAAGAAAACCATGTTAATGACTAGCCACACGAGAAACCTCTCTCTTC 127 Query 125 CTCCCGGGCCGAAATCTTGGCCTCTAATAGGAAACCTGCCAGAAATACTAGGGAGGAACA 184 |||| ||||| |||||||||||| || | |||||||| |||||||||||||||||||||| Sbjct 128 CTCCGGGGCCAAAATCTTGGCCTTTAGTTGGAAACCTACCAGAAATACTAGGGAGGAACA 187 Query 185 AGCCGGTGTTCCGGTGGATACATTC-TCTCATGAAAGAACTTAACACCGATATTGCGTGT 243 | ||||||||||||||||||||||| | | ||| ||||||| |||||||||||||| ||| Sbjct 188 AACCGGTGTTCCGGTGGATACATTCAT-TGATGGAAGAACTCAACACCGATATTGCATGT 246 Query 244 ATCTGTCTTGCGAATACTCACGTGATCTCCGTGACATCCCCGAGAATTGCAAGGGAGATT 303 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 247 ATCCGTCTTGCGAATACTCACGTGATCCCCGTGACATCCCCGAGAATTGCAAGGGAGATT 306 Query 304 TTGAAGAAGCAAGACTCCGTTTTTGCCACTAGACCGCTAACAATAGGCACGGAGCACTGC 363 |||||||||||||||||||||| |||| ||||||||||||||| || |||||| | ||| Sbjct 307 CTGAAGAAGCAAGACTCCGTTTTCGCCATTAGACCGCTAACAATGGGGACGGAGTATTGC 366 Query 364 AGTCGCGGGTACTTGACCATTGCGGTGGA-TCCACAAGGAGAGCAGTGGAAAAAGATGAG 422 || |||||||||||||||||||||||| | | |||||||||||||||||||||||||||| Sbjct 367 AGCCGCGGGTACTTGACCATTGCGGTGCAGT-CACAAGGAGAGCAGTGGAAAAAGATGAG 425 Query 423 GAGAGTGGTGGCATCTCACGTGACGAGCAAGAAGAGCTTCAAATTGATGCTTGAAAAGAG 482 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 426 GAGAGTGGTGGCATCTCACGTGACAAGCAAGAAGAGCTTCAAATTGATGCTTGAAAAGAG 485 Query 483 AACCGAAGAGGCTGATAACTTGGTCCGGTACATCAATAACCGCAGTGTCAAAAACTGTGA 542 |||||||||||| |||||||| ||||||||||||||||||||| ||||||||||| ||| Sbjct 486 AACCGAAGAGGCAGATAACTTAGTCCGGTACATCAATAACCGCTGTGTCAAAAACCGTGG 545 Query 543 TAATGGTAATGGTCTTTCGGTTATTGATTTAAGGCTTGTGTTGCGGCAATACAGCGGAAA 602 |||||||||||||||| |||||||||||||||| ||||| | || ||||||||||| || Sbjct 546 TAATGGTAATGGTCTTGCGGTTATTGATTTAAGATTTGTGGTACGACAATACAGCGGGAA 605 Query 603 TGTAGCTCGGAAGATGATGTTTGGTATAAGGCACTTTGGTAAAGGAAGTGAAGATGGATC 662 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||| Sbjct 606 TGTAGCTCGGAAGATGATGTTTGGTATACGGCATTTTGGTAAAGGAAGTGAAGATGAATC 665 Query 663 GGGACCAGGGTTCGAAGAGATTGAACATGTTGAATCTTTGTTTACAGTTTTAACCCATCT 722 ||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 666 GGGACCAGGGTCCGAAGAGATTGAACATGTCGAATCTTTGTTTACGGTTTTAACCCATCT 725 Query 723 TTACGCCTTTGCATTGTCGGATTATGTCCCGTGGCTAAGGTTCTTGGACTTGGAAGGCCA 782 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 726 TTACGCCTTTGCATTGTCGGATTATGTCCCGTGGTTAAGGTTCTTGGACTTGGAAGGCCA 785 Query 783 AGAGAAGATTGTGATTGACGCAATGAGAAATGTAAGCAAGTATAACGATCCTATTGTCGA 842 |||||| ||||| ||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct 786 TGAGAAGGTTGTGGCTGACGCAATGAGAAATGTAAGTAAGTATAACGATCCTTTTGTCGA 845 Query 843 TGAAAGACTCATGCAATGGCGAAATGGAAATATGAAAAAGCCTCAAGATTTTCTTGACAT 902 ||||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||| Sbjct 846 TGAAAGACTCATGCAATGGCGAAATGGGAAGATGAAAGAGCCTCAAGATTTTCTCGACAT 905 Query 903 GTTTATAATGGCGAAAGACACTGACGGGAAA-CCTACTCTGTCGGACGAAGAGATCAAAG 961 ||||||||||||||||||||| |||| ||| |||||||| ||||| ||||||||||||| Sbjct 906 GTTTATAATGGCGAAAGACACCAACGG-AAAGCCTACTCTATCGGAAGAAGAGATCAAAG 964 Query 962 CACAAGTGAAGGAACTAATGTTGGCGACGGTGGATAATCCGTCTAATGCGGCGGAATGGG 1021 ||||||||| ||||||||||||||| || || ||||||||||||||||||||||| |||| Sbjct 965 CACAAGTGACGGAACTAATGTTGGCTACAGTAGATAATCCGTCTAATGCGGCGGAGTGGG 1024 Query 1022 CCATGGCGGAGATGATTAATGAGCCGAGCATCATGCAAAAAGC 1064 | ||||||||||||||||| ||||||||||||||||||||||| Sbjct 1025 CTATGGCGGAGATGATTAACGAGCCGAGCATCATGCAAAAAGC 1067 Score = 392 bits (212), Expect = 4e-108 Identities = 260/283 (92%), Gaps = 3/283 (1%) Strand=Plus/Plus Query 1072 GTGAAAGAGGCATTCCGGTTACATCCCGTGGCGCCGTTCAACCTCCCTCACATGTCCACT 1131 ||| ||||| |||| ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 1109 GTG-AAGAGACATTTCGGTTACATCCGGTGGCGCCATTCAACCTCCCTCACATGTCCACT 1167 Query 1132 GCCT-ACGCTGTGGTAGACGGTTACTTCATCCCCAAGGGAAGCCACATGCTAATTAGTCG 1190 | || | |||||||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct 1168 G-CTGATGCTGTGGTGGATGGTTACTTCATCCCCAAGGGAAGCCACATGCTTATTAGTCG 1226 Query 1191 TATGGGGATCGGGAGAAACCCTAGCGTGTGGGACAAGCCGCTTAAGTTCGACCCTGAGAG 1250 ||||||||||||||||||||||| |||||||||||||||||||| || |||||||||| Sbjct 1227 TATGGGGATCGGGAGAAACCCTAATGTGTGGGACAAGCCGCTTAAATTTAACCCTGAGAG 1286 Query 1251 ACATTTGGGCAATAACAAAACCATGACGTACATGTTGCTGGCTCGGTTGATTCAAGGGTT 1310 |||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 1287 ACATTTAGGCAATAACTCATCCATGACGTACATGTTGCTGGCTCGGTTGATTCAAGGGTT 1346 Query 1311 CACGTGGTCACCAGTGCCCGGTGAAAGTAAAATTGATCTTTCA 1353 ||| |||||||||||||| |||||||||||||||||| ||||| Sbjct 1347 CACATGGTCACCAGTGCCTGGTGAAAGTAAAATTGATATTTCA 1389 > AT5G05260.1 | Symbols: CYP79A2 | cytochrome p450 79a2 | chr5:1559778-1561765 REVERSE LENGTH=1572 Length=1572 Score = 1474 bits (798), Expect = 0.0 Identities = 964/1043 (92%), Gaps = 15/1043 (1%) Strand=Plus/Plus Query 27 GTTTATTCTAGGTTTGCTTCTCCTTACATTAACTATGAAGCGTAAGGAGACGAACAAAAC 86 ||||||| ||||||||||||| ||| |||||||||||||||||||||||| ||| ||||| Sbjct 9 GTTTATTATAGGTTTGCTTCTTCTTGCATTAACTATGAAGCGTAAGGAGAAGAAGAAAAC 68 Query 87 CATGATATTCATTTGCCAC-ACGAGAAACCTCTCTCTCCCTCCCGGGCCGAAATCTTGGC 145 |||| || ||| ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 69 CATG---TTAATTAGCC-CTACGAGAAACCTCTCTCTCCCTCCCGGGCCGAAATCTTGGC 124 Query 146 CTCTAATAGGAAACCTGCCAGAAATACTAGGGAGGAACAAGCCGGTGTTCCGGTGGATAC 205 || |||| |||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct 125 CTTTAATCGGAAACCTACCGGAAATACTAGGGAGGAACAAACCGGTGTTCCGGTGGATAC 184 Query 206 ATTCTCTCATGAAAGAACTTAACACCGATATTGCGTGTATCTGTCTTGCGAATACTCACG 265 ||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||| Sbjct 185 ATTCTCTCATGAAAGAACTCAACACCGATATTGCATGTATCCGTCTTGCGAATACTCACG 244 Query 266 TGATCTCCGTGACATCCCCGAGAATTGCAAGGGAGATTTTGAAGAAGCAAGACTCCGTTT 325 ||||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||| Sbjct 245 TGATCCCCGTGACATCCCCGAGAATTGCAAGAGAGATTCTGAAGAAGCAAGACTCCGTTT 304 Query 326 TTGCCACTAGACCGCTAACAATAGGCACGGAGCACTGCAGTCGCGGGTACTTGACCATTG 385 | ||||||||||||||||| || ||||||||| ||||||| ||||||||||||||| ||| Sbjct 305 TCGCCACTAGACCGCTAACGATGGGCACGGAGTACTGCAGCCGCGGGTACTTGACCGTTG 364 Query 386 CGGTGGATCCACAAGGAGAGCAGTGGAAAAAGATGAGGAGAGTGGTGGCATCTCACGTGA 445 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 365 CGGTGGAGCCACAAGGAGAGCAGTGGAAGAAGATGAGGAGAGTGGTGGCATCTCACGTGA 424 Query 446 CGAGCAAGAAGAGCTT-CAAATTGATGCTTGAAAAGAGAACCGAAGAGGCTGATAACTTG 504 |||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||| Sbjct 425 CGAGCAAGAAGAGCTTCCAAA-TGATGCTACAAAAGAGAACCGAAGAGGCTGATAACTTA 483 Query 505 GTCCGGTACATCAATAACCGCAGTGTCAAAAACTGTGATAATGGTAATGGTCTTTCGGTT 564 |||||||||||||||||||| |||||||||||| ||| ||||| | | | | | |||| Sbjct 484 GTCCGGTACATCAATAACCGTAGTGTCAAAAACCGTGGTAATGCT--T--T-TGT-GGTT 537 Query 565 ATTGATTTAAGGCTTGTGTTGCGGCAATACAGCGGAAATGTAGCTCGGAAGATGATGTTT 624 |||||||||||||||| | | ||||||||||| ||||||||||||||||||||||||||| Sbjct 538 ATTGATTTAAGGCTTGCGGTACGGCAATACAGTGGAAATGTAGCTCGGAAGATGATGTTT 597 Query 625 GGTATAAGGCACTTTGGTAAAGGAAGTGAAGATGGATCGGGACCAGGGTTCGAAGAGATT 684 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 598 GGTATAAGGCATTTTGGTAAAGGAAGTGAAGATGGATCGGGACCAGGGTTGGAAGAGATT 657 Query 685 GAACATGTTGAATCTTTGTTTACAGTTTTAACCCATCTTTACGCCTTTGCATTGTCGGAT 744 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 658 GAACATGTGGAATCTTTGTTTACGGTTTTAACCCATCTTTACGCCTTTGCATTGTCAGAT 717 Query 745 TATGTCCCGTGGCTAAGGTTCTTGGACTTGGAAGGCCAAGAGAAGATTGTGATTGACGCA 804 |||||||||||||||||||||||||||||||||||||| |||||| |||||| | ||||| Sbjct 718 TATGTCCCGTGGCTAAGGTTCTTGGACTTGGAAGGCCATGAGAAGGTTGTGAGTAACGCA 777 Query 805 ATGAGAAATGTAAGCAAGTATAACGATCCTATTGTCGATGAAAGACTCATGCAATGGCGA 864 |||||||||||||| ||||||||||| ||| |||| |||||||||||||||||||||||| Sbjct 778 ATGAGAAATGTAAGTAAGTATAACGACCCTTTTGTTGATGAAAGACTCATGCAATGGCGA 837 Query 865 AATGGAAATATGAAA-AAGCCTCAAGATTTTCTTGACATGTTTATAATGGCGAAAGACAC 923 ||||| || |||||| || ||||||||||||||||||||||||||||| || |||||||| Sbjct 838 AATGGGAAGATGAAAGAA-CCTCAAGATTTTCTTGACATGTTTATAATAGCTAAAGACAC 896 Query 924 TGACGGGAAACCTACTCTGTCGGACGAAGAGATCAAAGCACAAGTGAAGGAACTAATGTT 983 ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 897 TGACGGGAAGCCTACTCTGTCGGACGAAGAGATCAAAGCACAAGTGACGGAACTAATGTT 956 Query 984 GGCGACGGTGGATAATCCGTCTAATGCGGCGGAATGGGCCATGGCGGAGATGATTAATGA 1043 ||||||||| |||||||||||||| ||||| || |||| ||||||||||||||||| || Sbjct 957 GGCGACGGTTGATAATCCGTCTAACGCGGCAGAGTGGGGTATGGCGGAGATGATTAACGA 1016 Query 1044 GCCGAGCATCATGCAAAAAGCCG 1066 ||||||||||||||||||||||| Sbjct 1017 GCCGAGCATCATGCAAAAAGCCG 1039 > AT5G35920.1 | Symbols: CYP79A4P | cytochrome P450, family 79, subfamily A, polypeptide 4 pseudogene | chr5:14056437-14056904 FORWARD LENGTH=468 Length=468 Score = 255 bits (138), Expect = 6e-67 Identities = 177/196 (90%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 1073 TGAAAGAGGCATTCCGGTTACATCCCGTGGCGCCGTTCAACCTCCCTCACATGTCCACTG 1132 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 20 TGAAAGAGGCATTCCGGTTACATCATGTGGCGCCATTCAACCTCCCTCACATGTCCACT- 78 Query 1133 CCT-ACGCTGTGGTAGACGGTTACTTCATCCCCAAGGGAAGCCACATGCTAATTAGTCGT 1191 || | | |||||| || |||||||||||||||||||||||||||| ||| ||||||||| Sbjct 79 ACTGATGTTGTGGTGGATGGTTACTTCATCCCCAAGGGAAGCCACAAGCTTATTAGTCGT 138 Query 1192 ATGGGGATCGGGAGAAACCCTAGCGTGTGGGACAAGCCGCTTAAGTTCGACCCTGAGAGA 1251 |||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||| Sbjct 139 ATGGGGATCGGGAGAAACCCTAAAGTGTGGGACAAACCGCTTAAGTTTGATCCTGAGAGA 198 Query 1252 CATTTGGGCAATAACA 1267 ||||| ||||||||| Sbjct 199 CATTTAAGCAATAACA 214 Score = 134 bits (72), Expect = 3e-30 Identities = 82/87 (94%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 1271 CCATGACGTACATGTTGCTGGCTCGGTTGATTCAAGGGTTCACGTGGTCACCAGTGCCCG 1330 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct 302 CCATGACGTACATGTTGGTGGCTCGGTTGATTCAAGGGTTCACGTGGTCACCAGTACCCA 361 Query 1331 GTGAAAGTAAAATTGATCTTTCATTAA 1357 ||||||||||||||||| ||||| ||| Sbjct 362 GTGAAAGTAAAATTGATATTTCAGTAA 388 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 68573944470 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5