BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg887889 Length=192 Score E Sequences producing significant alignments: (Bits) Value AT5G48810.1 | Symbols: ATB5-B, B5 #3, ATCB5-D, CB5-D | cytochro... 302 1e-81 > AT5G48810.1 | Symbols: ATB5-B, B5 #3, ATCB5-D, CB5-D | cytochrome B5 isoform D | chr5:19789067-19790334 REVERSE LENGTH=759 Length=759 Score = 302 bits (163), Expect = 1e-81 Identities = 176/182 (97%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 1 ATGGGCGGAGACGGCAAAGTTTTCACCTTGGCCGAAGTTTCTCAGCACAGTAGCTCCCAA 60 |||||||||||||| ||||||||||||||| |||| |||||||||||||||||| |||| Sbjct 155 ATGGGCGGAGACGGAAAAGTTTTCACCTTGTCCGAGGTTTCTCAGCACAGTAGC-GCCAA 213 Query 61 -GATTGTTGGATCGTCATCGACGGCAAGGTTTATGATGTGACAAAGTTCTTGGATGATCA 119 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 214 GGATTGTTGGATCGTCATCGACGGCAAGGTTTATGATGTGACAAAGTTCTTGGATGATCA 273 Query 120 TCCTGGTGGTGATGAGGTTATCTTGACTTCTACAGGGAAAGATGCGACCGATGATTTCGA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 274 TCCTGGTGGTGATGAGGTTATCTTGACTTCTACAGGGAAAGATGCGACCGATGATTTCGA 333 Query 180 GG 181 || Sbjct 334 GG 335 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 8500928319 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5