BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg888198 Length=1050 Score E Sequences producing significant alignments: (Bits) Value AT4G39770.1 | Symbols: TPPH | Haloacid dehalogenase-like hydrol... 1687 0.0 AT2G22190.1 | Symbols: TPPE | Haloacid dehalogenase-like hydrol... 806 0.0 > AT4G39770.1 | Symbols: TPPH | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:18448980-18451293 REVERSE LENGTH=1283 Length=1283 Score = 1687 bits (913), Expect = 0.0 Identities = 1004/1049 (96%), Gaps = 2/1049 (0%) Strand=Plus/Plus Query 1 ATGGTAAGATTCATAGAAgaaaacacaaaacttgtggaaaaagaaacaggaaacaaatca 60 ||||| ||||||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct 76 ATGGTTAGATTCATAGAAGAAAACACAAAACTTGTAGAAAAAGAAACCGGGAACAAATCA 135 Query 61 aacaacgatgtaacaacaacGAAGAAGAAAGTTCTTCAAGATCTTAGTATCAACAATGGA 120 ||||||||||||||||||||||||||||||| |||||||||| | | ||||||||||||| Sbjct 136 AACAACGATGTAACAACAACGAAGAAGAAAGCTCTTCAAGATATCATTATCAACAATGGA 195 Query 121 GGAGGATTAATCAATTCATGGGTTGATTCAATGAGAGCTTGTTCTCCTACTCACCTTAAA 180 | |||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 196 GTAGGATTGATCAATTCATGGGTTGATTCAATGAGAGCTTGTTCCCCTACTCATCTTAAA 255 Query 181 TCTTTGTTGAAACAAAGCTCTTGGCTCACAGAACATCCATCAGCTTTGGATATGTTTGAA 240 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 256 TCTTTGTTGAAACAAAGCTCTTGGCTCACGGAACATCCATCAGCTTTGGATATGTTTGAA 315 Query 241 GAGATTCTTCACCTTTCTGAAGGAAAACAAATCGTTATGTTCTTGGATTATGATGGCACT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 316 GAGATTCTTCACCTTTCTGAAGGAAAACAAATCGTTATGTTCTTGGATTATGATGGCACT 375 Query 301 TTATCTCCCATTGTTGATGATCCAGATCGAGCTTTCATGTCTAAG-AAGATGAGAAGAAC 359 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 376 TTATCTCCCATTGTTGATGATCCAGATCGAGCTTTCATGTCT-AGAAAGATGAGAAGAAC 434 Query 360 TGTGAGGAAACTAGCAAACTGTTTCCCGACGGCCATAGTTAGTGGGAGATGCAGAGAAAA 419 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 435 TGTGAGGAAACTAGCAAACTGTTTCCCGACGGCCATAGTTAGTGGGAGATGCATAGAAAA 494 Query 420 GGTTTATAATTTTGTGAAACTAACTGAGTTGTACTATGCTGGAAGTCATGGAATGGACAT 479 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 495 GGTTTATAACTTTGTAAAACTAACTGAGTTGTACTATGCTGGAAGTCATGGAATGGACAT 554 Query 480 CAAAGGACCAGAGCAAGGGTCCAAATTTGAGGAAGTAAGATTTGATAGTAAATCTCTTCT 539 |||||||||||||||||||||||||| |||| || | | ||||||||||||||||| Sbjct 555 CAAAGGACCAGAGCAAGGGTCCAAATATGAGCAAATTTTACAGGATAGTAAATCTCTTCT 614 Query 540 TTGCCAACCAGCTACAGAGTTCCTCCCCATGATCGACGAGGTTTATAAAAAATTAGTGGA 599 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 615 TTGCCAACCAGCTACAGAGTTCCTCCCCATGATCGACGAGGTTTATCATAAATTAGTGGA 674 Query 600 GACAACAAAATTTACTCCCGGAGCCCAAGTAGAGAACAATAAATTTTGTGTCTCGGTTCA 659 || |||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 675 GAAAACAAAATCTACTCCCGGAGCCCAAGTAGAGAACAACAAATTTTGTGTCTCTGTTCA 734 Query 660 CTTCCGACGTGTCGATGAAAATAACTGGAGTGATTTGGCTAACCAAGTTCGATCAGTAAT 719 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 735 CTTCCGACGCGTAGATGAAAATAACTGGAGTGATTTGGCTAACCAAGTTCGATCAGTAAT 794 Query 720 GAAGGACTACCCTAAGCTCCGTCTTACTCAAGGAAGAAAAGTTTTAGAAGTTCGTCCTAT 779 ||| ||||||||||||||||||||||||||||||||||||||||| || |||||||| || Sbjct 795 GAAAGACTACCCTAAGCTCCGTCTTACTCAAGGAAGAAAAGTTTTGGAGGTTCGTCCGAT 854 Query 780 TATTAAATGGGATAAAGGCAAAGCACTCGAGTTTTTATTAGAGTCACTTGGATACGCTAA 839 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 855 TATTAAATGGGACAAAGGCAAAGCACTCGAGTTTTTATTAGAGTCACTTGGATACGCTAA 914 Query 840 TTGTACCGACGTGTTCCCTCTTTATATCGGAGATGATCGCACAGACGAAGATGCATTTAA 899 |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 915 TTGTACCGACGTTTTCCCTCTTTATATCGGAGATGATCGCACCGACGAAGATGCATTCAA 974 Query 900 GATATTGAGAGAAAGAAGACAAGGTCTTGGCATTCTTGTATCTAAATTTCCAAAGGAGAC 959 | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 975 GGTATTGAGAGAACGAAGACAAGGTCTTGGCATTCTTGTATCTAAATTTCCAAAGGAGAC 1034 Query 960 TAGCGCGTCTTATTCACTGCAAGAACCCGATGAGGTTATGGAGTTCTTGCAACGTTTAGT 1019 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1035 TAGCGCGTCTTATTCACTGCAAGAACCCGATGAGGTTATGGAGTTCTTGCAACGTTTAGT 1094 Query 1020 GGAATGGAAACAATTGAGATCTGGAGCAT 1048 ||||||||||||||||||||||||||||| Sbjct 1095 GGAATGGAAACAATTGAGATCTGGAGCAT 1123 > AT2G22190.1 | Symbols: TPPE | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:9433765-9436544 REVERSE LENGTH=1259 Length=1259 Score = 806 bits (436), Expect = 0.0 Identities = 791/959 (82%), Gaps = 37/959 (4%) Strand=Plus/Plus Query 87 GAAAGTTCTTCAAGATCTT-AGTATCAACAATGGAGGAGGATTAATCAA-TTCATGGGTT 144 |||||||||||| ||| || || ||||||| ||||||||| | || || ||||||||| Sbjct 173 GAAAGTTCTTCATGATTTTCAG-ATCAACAGCGGAGGAGGACTGAT-AAGATCATGGGTT 230 Query 145 GATTCAATGAGAGCTTGTTCTCCTACTCACCTTAAAT-CTTTGTTGAAACAAAGC-TCTT 202 ||||| |||||||||||||||||||||| || ||||| ||| | | | || | | || Sbjct 231 GATTCTATGAGAGCTTGTTCTCCTACTCGCCCTAAATCCTTCAAT--AGCCAATCTTGTT 288 Query 203 GGCTCACA-GAACATCCATCAGCTTTGGATATGTTTGAAGAGATTCTTCACCTTTCTGAA 261 || | | | ||||||||||| |||||| | ||||| ||||| || ||||| |||||| Sbjct 289 GGATTA-AGGAACATCCATCTGCTTTGAACATGTTCGAAGAAATACTTCATAAATCTGAA 347 Query 262 GGAAAACAAATCGTTATG-TTCTTGGATTATGATGGCACTTTATCTCCCATTGTTGATGA 320 ||||||||||| |||||| ||||| ||||||||||| ||| | ||||||||||||||||| Sbjct 348 GGAAAACAAATAGTTATGTTTCTT-GATTATGATGGTACTCTCTCTCCCATTGTTGATGA 406 Query 321 TCCAGATCGAGCTTTCATGTCTAAGAAGATGAGAAGA-ACTGTGAGGAAACTAGCAAACT 379 ||| ||||||||||||||||| ||||||||| ||| | |||||||||||||| ||||| | Sbjct 407 TCCTGATCGAGCTTTCATGTCCAAGAAGATGCGAA-ATACTGTGAGGAAACTTGCAAAGT 465 Query 380 GTTTCCCGACGGCCATAGTTAGTGGGAGATGCAGAGAAAAGGTTTATAATTTTGTGAAAC 439 |||| || || |||||||||||||||||||||||||| ||||||| || |||||||||| Sbjct 466 GTTTTCCAACAGCCATAGTTAGTGGGAGATGCAGAGAGAAGGTTTCTAGTTTTGTGAAAT 525 Query 440 TAACTGAGTTGTACTATGCTGGAAGTCATGGAATGGACATCAAAGGACCAGAGCAAGGGT 499 |||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| | Sbjct 526 TAACTGAGTTATACTACGCTGGAAGTCATGGCATGGACATCAAAGGACCAGAGCAAGGAT 585 Query 500 CCAAATTTGAGGAAGTAAGATTTGATAGTAAATCTCTTCTTTGCCAACCAGCTACAGAGT 559 | ||| | | ||| || | || | | | ||||||||||| ||||| || || || | Sbjct 586 CTAAA--T-A-CAAG-AA-A---GAAAATCAGTCTCTTCTTTGTCAACCCGCAACTGAAT 636 Query 560 TCCTCCCCATGATCGACGAGGTTTATAAAAAATTAGTGGAG-ACAACAAAATTTACTCCC 618 ||||||| |||| ||||||||||||||||| |||| ||| || || ||| | ||| Sbjct 637 TCCTCCCGGTGATAAACGAGGTTTATAAAAAACTAGTCGAGAAC-ACTCAATCGATTCCA 695 Query 619 GGAGCCCAAGTAGAGAACAATAAATTTTGTGTC-TCGGTTCACTTCCGACGTGTCGATGA 677 ||||| |||| |||||||| |||||||||| | || |||||||| ||| | || || || Sbjct 696 GGAGCGAAAGTTGAGAACAACAAATTTTGTG-CGTCTGTTCACTTTCGATGCGTAGAAGA 754 Query 678 AAATAACTGGAGTGATTTGGCTAACCAAGTTCGATCAGTAATGAAGGACTACCCTAAGCT 737 |||||| |||||||| ||||| | |||||||||||||| ||||| | ||||| ||||| Sbjct 755 AAATAAATGGAGTGACTTGGCCCATCAAGTTCGATCAGTCTTGAAGAATTACCCCAAGCT 814 Query 738 CCGT-CTTACTCAAGGAAGAAAAGTTTTAGAAG-TTCGTCCTATTATTAAATGGGATAAA 795 | | ||||| |||||||||||||| || | || ||||||| || ||||| ||||||||| Sbjct 815 -CATGCTTACCCAAGGAAGAAAAGTATT-GGAGATTCGTCCAATCATTAAGTGGGATAAA 872 Query 796 GGCAAAGCACTCGAGTTTTTATTAGAGTCACTTGGATACGCTAATTGTACCGACGTGTTC 855 |||||||||||||||||||| ||||| ||||| ||||| | |||||||||||| || || Sbjct 873 GGCAAAGCACTCGAGTTTTTGTTAGAATCACTAGGATATGATAATTGTACCGATGTTTTT 932 Query 856 CCTCTTTATATCGGAGATGATCGCACAGACGAAGATGCATTTAAGATATTGAGAGA-AAG 914 ||| | ||||| ||||||||||| || |||||||| || ||||||||| ||||||| || Sbjct 933 CCTATATATATTGGAGATGATCGTACCGACGAAGACGCCTTTAAGATACTGAGAGACAAA 992 Query 915 AAGACAAGGTCTTGGCATTCTTGTATCTAAATTTC-CAAAGGAGACTAGCGCGTCTTATT 973 || |||||||||||| |||||||| || |||| | |||||||||||| || ||||||| Sbjct 993 AA-ACAAGGTCTTGGAATTCTTGTGTCCAAATA-CGCAAAGGAGACTAATGCTTCTTATT 1050 Query 974 CACTGCAAGAACCCGATGAGGTTATGGAGTTCTT-GCAACGTTTAGTGGAATGGAAACA 1031 | ||||||| || ||||||||||||| || || | ||||||| |||||||||||||| Sbjct 1051 CTTTGCAAGAGCCAGATGAGGTTATGGTTTTTTTAG-AACGTTTGGTGGAATGGAAACA 1108 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 51490000675 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5