BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg889417 Length=333 Score E Sequences producing significant alignments: (Bits) Value AT4G27360.1 | Symbols: | Dynein light chain type 1 family prot... 536 4e-152 > AT4G27360.1 | Symbols: | Dynein light chain type 1 family protein | chr4:13693957-13694658 FORWARD LENGTH=528 Length=528 Score = 536 bits (290), Expect = 4e-152 Identities = 319/333 (96%), Gaps = 1/333 (0%) Strand=Plus/Plus Query 1 ATGTTAGAAGGGAAAGCAGTAATGGGTGAGACAGATATGAAGCAAACAATGAAGGAAGAT 60 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 76 ATGTTAGAAGGGAAAGCAGTAATGGGTGATACAGATATGAAGCAAACAATGAAGGAAGAT 135 Query 61 GCTCTTAGTTTGGCCTCCAAAGCCCTTGATTGCTTTGATGTCACCGAACCCACCCAAATC 120 |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 136 GCTCTTAGTTTGGCCTCCAAAGCCCTTGATTGCTTTGATGTCACCGAACCTACTCAAATT 195 Query 121 GCACGTTTCATCAAGAAGGAATTTGATAGTAGTTACGGATCGGGGTGGCAGTGCATCGTC 180 || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 196 GCCCGTTTCATCAAGAAGGAATTTGATAGAAGTTACGGATCGGGGTGGCAGTGCATCGTG 255 Query 181 GGGACGCATTTTGGATCTTTCGTGACTCATTGCAGTGGCTGCTTCATCCATTTCTCAGTT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 256 GGGACGCATTTCGGATCTTTCGTGACTCATTGCAGTGGCTGCTTCATCCATTTCTCAGTT 315 Query 241 GGCACCCTTACCATTTTGCTTTTTAAGGGATCAGTAGGTGAACCGGCGCCCC-GGACCGA 299 |||| |||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| Sbjct 316 GGCAGCCTTACCATTTTGCTTTTTAAGGGATCAGTCGGTGAACCGGCCCCCCCGGACCGA 375 Query 300 CGGTCTAGCTAATTTAGACAGTATTGTAAAATA 332 | |||||||||||||||||||||||||||||| Sbjct 376 TGCTCTAGCTAATTTAGACAGTATTGTAAAATA 408 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15532734441 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5