BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg890460 Length=1008 Score E Sequences producing significant alignments: (Bits) Value AT4G17550.1 | Symbols: | Major facilitator superfamily protein... 883 0.0 > AT4G17550.1 | Symbols: | Major facilitator superfamily protein | chr4:9777648-9779738 REVERSE LENGTH=1925 Length=1925 Score = 883 bits (478), Expect = 0.0 Identities = 535/562 (95%), Gaps = 5/562 (1%) Strand=Plus/Plus Query 451 ACTATTGGTGGAGAGTACGTGTCTGTGAAAACAGCAGGAAATCTCTCCACGCTATTTGAT 510 |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 1075 ACTATTGGTGGAGAGTACGTGTCTGTGAAAACAGCAGGGAATCTCTCCACACTATTTGAT 1134 Query 511 GTTGGAGGCATTGTAGGAGGGATTCTTTGTGGTTACATTTCAGACAAATTCAAAGCAAGG 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1135 GTTGGAGGCATTGTAGGAGGGATTCTTTGTGGTTACATTTCAGACAAATTCAAAGCAAGG 1194 Query 571 GCTACAACTGCAGCAGCATTCATGTACGCTGCAATTCCAGCAATGCTTGTGTACCATTCC 630 |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 1195 GCTACAACTGCAGCTGCATTCATGTACGCTGCGATTCCGGCAATGCTTGTGTACCATTCC 1254 Query 631 TATGGAGGTGTCTCTCAGACAGTCAACATCCTCCTCATGATGGTTGCTGGTTTGTTTGTC 690 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1255 TATGGAGGTGTCTCTCAGACAGTCAACATCCTCCTCATGATGGTTGCTGGTTTGTTTGTC 1314 Query 691 AATGGTCCTTATGCACTCATCACAACCGCAGTCTCAGCGGATCTTGGAACCCACAAGTCT 750 ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| Sbjct 1315 AATGGTCCTTATGCACTCATCACAACCGCAGTCTCTGCGGATCTGGGAACGCACAAGTCT 1374 Query 751 TTACAAGGCGATTCAAGGGCGCTTGCAACTGTGACTGCAATTATTGATGGTACTGGATCT 810 |||||||||||||||||||||||||| ||||| ||||| || ||||| || ||||||||| Sbjct 1375 TTACAAGGCGATTCAAGGGCGCTTGCGACTGTTACTGCTATCATTGACGGGACTGGATCT 1434 Query 811 GCTGGTGCGGCTTTAGGTCCGCTTTTGACAGGGTTTCTTTCGAC-CATGGGCTGGCAAGC 869 || |||||||||||||||||||||||||||||||||||||| || | |||| |||||||| Sbjct 1435 GCCGGTGCGGCTTTAGGTCCGCTTTTGACAGGGTTTCTTTCTACTC-TGGGTTGGCAAGC 1493 Query 870 TGTGTTCTATATGTTAGTCGTTGGAGCTCTTTGTGCTGGTTTGCTTTTGACCCGTCTGGT 929 ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1494 TGTGTTCTATATGTTGGTCGTTGGAGCTCTCTGTGCTGGTTTGCTTTTGACCCGTCTGGT 1553 Query 930 TATTGCTGAAATTAGAGAGAAACTTGGATATGTTGATGAAG---TTCCTGCGTCTGAACC 986 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct 1554 TATTGCTGAAATTAGAGAGAAACTTGGATATGTTGATGAAGAAGTTCCTGCTTCTGAACC 1613 Query 987 ACTGTTAACAGACAGAAGATGA 1008 ||||||||| || ||||||||| Sbjct 1614 ACTGTTAACCGATAGAAGATGA 1635 Score = 719 bits (389), Expect = 0.0 Identities = 438/460 (95%), Gaps = 9/460 (2%) Strand=Plus/Plus Query 1 ATGGCGATGAATTCGAAGAGGAAAACACCACCTGGGATTGCGCTTCTGAGAAGAGCCAGA 60 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct 1 ATGGCGATGAATTCGAAGAGGAAAACACCACCTGGGATTGCGCTTCTGAGGAGAGTCAGA 60 Query 61 GGAAGAAATTGGAGTCCAAAGACGTTTCGGTACGCGATTTTGTTGATTACTTTCATCGCG 120 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 61 GGAAGAAATTGGAGTCCAAAGACGTTTCGGTACGCGATTTTGTTTATTACTTTCATCGCA 120 Query 121 TATGCTTGTTACCATGCTTCTCGTAAACCAAGCAGCATAGTGAAGAGCGTTTTACACCCA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TATGCTTGTTACCATGCTTCTCGTAAACCAAGCAGCATAGTGAAGAGCGTTTTACACCCA 180 Query 181 GACTCAAGCACTAAGCCACCTCAAGAACACAACAGCAACAAAATTTATCCTTGGCCTATG 240 ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct 181 GACTCAAGCACTAAGCCACCTCAAGAACATAACAGCGACAAAATTTATCCTTGGCCTATG 240 Query 241 GGCAGGGTGTTTGTGAAGAGAGAAATTG---AT---GA-G-G-TTTTGTTGCATCGTAAC 291 || | |||||||||||||||||||||| || || | | |||||||||||||||| Sbjct 241 GGTAACGTGTTTGTGAAGAGAGAAATTGGTGATATAGATGAGGTTTTGTTGCATCGTAAG 300 Query 292 TCTAAAGGATGGGAACCGTTTAATGGGAAAGATGGGACGTCTAGGTTGGGAGAGATTGAT 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TCTAAAGGATGGGAACCGTTTAATGGGAAAGATGGGACGTCTAGGTTGGGAGAGATTGAT 360 Query 352 GTAGCGTTTCTTGCTTGTTACTCTATAGGAATGTATGTTGCTGGACATTTGGGTGATAGT 411 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 361 GTGGCGTTTCTTGCTTGTTACTCTATAGGAATGTATGTTGCTGGTCATTTGGGTGATAGT 420 Query 412 TTGGATCTGAGATTGTTTCTTACTTGGGGAATGATTGGGA 451 |||||||||||||||||||| ||||||||||||||||||| Sbjct 421 TTGGATCTGAGATTGTTTCTGACTTGGGGAATGATTGGGA 460 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49380166501 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5