BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg890516 Length=1029 Score E Sequences producing significant alignments: (Bits) Value AT4G17070.1 | Symbols: | peptidyl-prolyl cis-trans isomerases ... 1620 0.0 > AT4G17070.1 | Symbols: | peptidyl-prolyl cis-trans isomerases | chr4:9595385-9598237 REVERSE LENGTH=1341 Length=1341 Score = 1620 bits (877), Expect = 0.0 Identities = 981/1032 (95%), Gaps = 3/1032 (0%) Strand=Plus/Plus Query 1 ATGCCCCGTCGATTAAACGACGTCGAGCCTGGCCGTTTTACCGCCACTGCTCTCCTTTTA 60 |||||||||||||||||||||| |||||||||||||||||||||||| | ||| |||||| Sbjct 172 ATGCCCCGTCGATTAAACGACGGCGAGCCTGGCCGTTTTACCGCCACCGTTCTTCTTTTA 231 Query 61 ATCGGTTTGATCTCTTGTGTTATCGTCTACGCTGTCTTCTCTACTATCCTCCGTCC-T-- 117 |||||||| |||||||||||||||||||||||||| |||||| || |||||||||| | Sbjct 232 ATCGGTTTAATCTCTTGTGTTATCGTCTACGCTGTTTTCTCTTCTGTCCTCCGTCCATCC 291 Query 118 CAAGATCCTACCCTCGTTGATTCCGCTGTTCGATTCACGGAGGGGTCGCGAGATCACGAC 177 ||||||||||| |||||||||||||| |||||||||| |||| | ||||||||||||| Sbjct 292 CAAGATCCTACACTCGTTGATTCCGCGGTTCGATTCAAAGAGGAGCCGCGAGATCACGAT 351 Query 178 GCGGCTGAAGAAGGTGGAGGCGGGTGTTGCCGTGGAATTGATAATTTGGAGCTTTGGGGT 237 || ||||||| |||| ||| |||||||||||||||||||||||| |||||||||||||| Sbjct 352 GCAACTGAAGACGGTGAAGGTGGGTGTTGCCGTGGAATTGATAATCTGGAGCTTTGGGGT 411 Query 238 CCGGCGGTGAAGTGGGGGACGGATTTTAAGTTTAATTCGTCGGATGGATGTTGTAAAGCT 297 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 412 CCGGCGGTGAAGTGGGGCACGGATTTTAAGTTTAATTCGTCTGATGGATGTTGTAAAGCT 471 Query 298 TGTAAAGTTATGTGTAGCGGTAACGATGGACCTTGCTTGTGCGATTCATGGGTCTTCTGT 357 ||||||||||||||||| || |||||||||||||||||||||||||||||||| || ||| Sbjct 472 TGTAAAGTTATGTGTAGTGGCAACGATGGACCTTGCTTGTGCGATTCATGGGTGTTTTGT 531 Query 358 GGAAACAAAGACGCTTGTGGGTCGAAGTTTGGAGAGTGTTGGTTGAAGAAGCAAAAAGAT 417 || |||||||| | |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 532 GGGAACAAAGAGGATTGTGGCTCGAAGTTTGGAGAGTGTTGGTTGAAGAAGCAAAAAGAT 591 Query 418 GTCTTGGTGCCTGATCGACAAGGAGGTGGGGAGAAAGTAATGTGGACATCTGGGCTTATC 477 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 592 GTCTTGGTGCCTGATCGACAAGGAGGTGGCGAGAAAGTAATGTGGACATCTGGACTTATC 651 Query 478 TTCGGACAAGGCCAGGGCATTGTTGGTTTTGAAACGGAACACGGCGTAATTCATGTCAAA 537 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 652 TTCGGACAAGGCCAGGGCATTGTTGGTTTTGAGACGGAACACGGCGTAATTCATGTCAAA 711 Query 538 CTTCACCCTGAGTGCGCTCCTCACTCAGTATACTACATTCTGAGTTTGTTAACTCTACGC 597 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 712 CTTCACCCTGAATGCGCTCCTCACTCAGTATACTACATTCTGAGTTTGTTAACTCTACGC 771 Query 598 CACTGTGCAGGCTGCCAGTTTCATCGAGCAGAGAACCGGGGATCATATTGGGACTCAGAA 657 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 772 CATTGTGCAGGCTGCCAGTTTCATCGAGCAGAGAACCGGGGATCATATTGGGACTCAGAA 831 Query 658 GGCAATCATGTAAAGAATGCTCCCTTTGGTCCACCATACGCTATGATTCAAGGAATACTC 717 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 832 GGCAATCATGTAAAGAATGCTCCCTTTGGTCCACCATACGCTATGATTCAAGGAATACTC 891 Query 718 CACGCCGAGGGAAACATGTTCACACCGATTCCAACCGAGCACTGCCCAACTATAAGACGT 777 || |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| Sbjct 892 CAGGCCGAGGGAAACATTTTCACACCGATCCCAACCGAGCACTGCCCAACTATAAGCCGT 951 Query 778 GGCTCGGTGGCGTGGGTCGGCTCGGGTCCAGAATTCTTCATCAGTTTAGCAAACCACCAC 837 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 952 GGCTCGGTGGCGTGGGTCGGCTCGGGTCCAGAATTCTTCATCAGTTTAGCAAACCACCAC 1011 Query 838 GAATGGAAACAATCTTACACTGTATTCGGCTCAGTTCTACCGGAAGACATGGATGTTGTG 897 |||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| ||| Sbjct 1012 GAATGGAAACAATCTTACACGGTATTCGGCTTAGTTCTACCAGAAGACATGGATGTCGTG 1071 Query 898 GAGACGATTGCCGGTTTACCGACAAGAGCCGATGTCTGGAACAGCGTCAATGTCTCTGTG 957 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1072 GAGACAATTGCCGGTTTACCAACAAGAGCCGATGTCTGGAACAGCGTCAATGTCTCTGTG 1131 Query 958 CTGGAGAAACCGGTGTCCTTAACCGTATGGAGAATGAAGACGGGCCAAGAACAAGAAGAA 1017 |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1132 CTGGAGAAACCGGTTTCCTTAACCGTACGGAGAATGAAGACGGGCCAAGAACAAGAAGAA 1191 Query 1018 ACCGGTTCATGA 1029 |||||||||||| Sbjct 1192 ACCGGTTCATGA 1203 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 50435083588 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5