BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg890648 Length=504 Score E Sequences producing significant alignments: (Bits) Value AT4G16140.1 | Symbols: | proline-rich family protein | chr4:91... 706 0.0 > AT4G16140.1 | Symbols: | proline-rich family protein | chr4:9129016-9129841 FORWARD LENGTH=826 Length=826 Score = 706 bits (382), Expect = 0.0 Identities = 468/507 (92%), Gaps = 15/507 (3%) Strand=Plus/Plus Query 1 ATGGAAACTTTCAGAACATTCCAtctttttcttttacttctcttcttcttcttcttcACA 60 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||| Sbjct 31 ATGGAAACTTTCAGAACATTCCA------TC-TTT--TTCTCTTCTTCTTCTTCTTCACA 81 Query 61 TTCACTACTTCACTGACGTCACCATCTCAGATCGCTGACTGTACAATGTGCACTTCTTGT 120 ||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 82 TTCACTACTACCCTGACGTCACCATCTCAGATCGCAGACTGTACAATGTGCACTTCTTGT 141 Query 121 GACAACCCTTGTCAACCAAACCC-T-T-CTCCTCCACCGCCGTCAAATCCATCTCCTCCT 177 ||||||||||||||||||||||| | | ||||||| || ||||||||||||||||||||| Sbjct 142 GACAACCCTTGTCAACCAAACCCTTCTCCTCCTCCTCCACCGTCAAATCCATCTCCTCCT 201 Query 178 CCTCCAGCCCCCACCACCACCGCATGTCCTCCACCTCCTAGCTCCGGTGGTGGTGGTCCT 237 |||||| | |||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct 202 CCTCCATCTCCCACCACCACCGCCTGTCCTCCACCTCCTAGCTCCAGTGGTGGTGGTCCT 261 Query 238 TACTACTACTACCCTCCTCCTTCTCAATCTGGCTCCTACCGTCCACCACCTTCTTCCTCC 297 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct 262 TACTACTACTACCCTCCTGCTTCTCAATCTGGCTCTTACCGTCCACCACCTTCTTCCTCC 321 Query 298 GGCGGTGGCTACTATTATCCACCTCCTAAAAGTGGAGGAAACTACCCTTTTACGCCGCCG 357 | ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 322 AGTGGTGGCTACTACTATCCACCTCCTAAAAGTGGAGGAAACTACCCTTATACACCGCCT 381 Query 358 CCAAACCCCATCGTTCCATATTTTCCGTTTTACTACTACAACCCTCCGCCTCAATCTGTT 417 |||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 382 CCAAACCCTATCGTTCCATATTTTCCGTTTTACTATTACAACCCTCCGCCGCAATCTGTT 441 Query 418 ATGTCCGGATCCGATGCAAAGATCAGATTCTCTTACGGAGTTTCATTTCTTCTTTTAGTT 477 |||||||||||||||||||||||||||||||||||||||||||||||| || || | || Sbjct 442 ATGTCCGGATCCGATGCAAAGATCAGATTCTCTTACGGAGTTTCATTTATT-TTA-A-TT 498 Query 478 TTCTCTCTTTGTTTCGGTTGCTTTTAG 504 |||||||||| |||||||||||| ||| Sbjct 499 TTCTCTCTTTATTTCGGTTGCTTCTAG 525 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24062156413 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5