BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg892416 Length=1410 Score E Sequences producing significant alignments: (Bits) Value AT5G04980.2 | Symbols: | DNAse I-like superfamily protein | ch... 2263 0.0 AT2G01900.1 | Symbols: | DNAse I-like superfamily protein | ch... 63.9 4e-09 > AT5G04980.2 | Symbols: | DNAse I-like superfamily protein | chr5:1468575-1470772 REVERSE LENGTH=1489 Length=1489 Score = 2263 bits (1225), Expect = 0.0 Identities = 1351/1411 (96%), Gaps = 11/1411 (1%) Strand=Plus/Plus Query 1 ATGTCGGATCCACTCTATATATTTAATAGGTCTCAATCCGAGATAGTAATTGAATCTCTT 60 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 89 ATGTCGGATCCACTCTATATATTTAATAGGTCTCAATCCGAGATAGTAGTTGAATCTCTT 148 Query 61 TTAGCTTCAAGCAATCTCAGATCTTCAATGCCCACTCAGCAAATCCAATCCTTAAGAGTC 120 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 149 TTAGCTTCAAGCAATCTCAGATCTTCAATGCCTACTCAGCAAATCCAATCCTTAAGAGTC 208 Query 121 TTTGTGGCGACATGGAACGTGGGAGGAAAATCTCCACACTCTGGTCTTAATCTCGATGCT 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 209 TTTGTGGCGACATGGAACGTGGGAGGAAAATCTCCACACTCTGGTCTTAATCTTGATGCT 268 Query 181 TTGCTTCACGTCCACAGCGAATAT-GATATATACGTTTTAGGTTTTCAGGAGATTGTTCC 239 ||||||||||| || || |||| | ||| ||||||||||||||||||||||||||||||| Sbjct 269 TTGCTTCACGTGCATAGTGAAT-TCGATGTATACGTTTTAGGTTTTCAGGAGATTGTTCC 327 Query 240 ATTGAATGCTGGAAATGTCCTTGTTCTTGGAGACAACGAGCCTGCTGCGAAATGGTTAGC 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 328 ATTGAATGCTGGAAATGTCCTTGTTCTTGGAGACAACGAGCCTGCTGCGAAATGGTTAGC 387 Query 300 TATGATCAATCAATCCTTGAACAAGTCATCATCAACATCATCTTCTGGAGGAAGACTTGG 359 ||||||||||||||||| ||||| ||||||| ||||||||||||||||||||| | Sbjct 388 GATGATCAATCAATCCTTAAACAA---ATCATCA---TCATCTTCTGGAGGAAGACTTAG 441 Query 360 TCCAAAAACTCCATCTTTTGGCGCTGGATCTATGTTCTTTGCAAAACCTTCTTTGAAGAA 419 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 442 CCCAAAAACTCCATCTTTTGGCGCTGGATCGATGTTCTTTGCGAAACCTTCTTTGAAGAA 501 Query 420 GATCAGTGAGAGTTTCAGAACAGAATGCAGGAGAAAGCTGAAGATCTGTAACTGCAGCAC 479 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 502 GATTAGTGAGAGTTTCAGAACAGAGTGCAGGAGAAAGCTGAAGATCTGTAACTGCAGCAC 561 Query 480 TTTCTCTGAAGAGATTGTAAAAAAGTATGGGAGAGAATCTTGTTTCAGATGTCCAGAAGG 539 |||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct 562 TTTCTCTGAAGATATTGTAAGAAAGTATGGGAGAGAATCTTGTTTCAGATGTCCTGAAGG 621 Query 540 TCTAGTTAACCAATCCGGTGTACTTTCtgatgacgaagaagacgaagatgatgatgacga 599 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 622 TCTAGTTAACCAATCCGGTGTACTTTCTGATGACGAAGAAGATGAAGATGATGA---CGA 678 Query 600 tgatgatgaagacgaggatgaagGAGGAGGAAAAGTTGCTTCTCTTGTAAGCAACCAAAT 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 679 TGATGATGAAGACGAGGATGAAGGAGGAGGAAAAGTTGCTTCTCTTGTAAGCAACCAAAT 738 Query 660 GATGATGAAGTATGGCTTAGTAGCATCAAAGCAAATGGTGGGAATATTCCTCACTGTGTG 719 || ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 739 GACGATGAAGTATGGCTTAGTAGCATCAAAGCAAATGGTGGGTATATTCCTTACTGTGTG 798 Query 720 GATGAGAAAGGAACTTATTCAACACGTTTCTCATCTCAGAATCTCCAGCGTCACCCGCGG 779 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 799 GATGAGAAAGGAACTTATTCAACACGTTTCTCATCTCAGAATCTCCTCCGTCACCCGCGG 858 Query 780 AATCATGGGTTGCTTAGGAAACAAGGGATGCATAGCTGTGAGTTTGCAGCTCTACAAGAC 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 859 AATCATGGGTTGCTTAGGAAACAAGGGATGCATAGCTGTGAGTTTGCAGCTCTACAAGAC 918 Query 840 TAGCTTCTGCTTCATCTGCAGTCATCTAGCTTCTGGTGAGAGAGAAGGAGACGAACGTCG 899 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 919 GAGCTTCTGCTTCATCTGCAGTCATCTAGCTTCTGGTGAGAGAGAAGGAGACGAACGCCG 978 Query 900 CAGAAACTCAGATGTGATCGAGATTCTCAAGAACACAACTTTCCCTAGAATCTGCAGAAC 959 |||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 979 CAGAAACTTAGATGTGATCGAGATTCTCAAGAACACAAGTTTCCCTAGAATATGCAGAAC 1038 Query 960 TTCTTTTACTCGTGTCCCTGATCGAATCACTAAGCATGATCGGGTCATATGGCTCGGAGA 1019 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| Sbjct 1039 CTCTTTTACTCGTGTCCCTGATCGAATCACAAAGCACGATCGGGTCATATGGCTTGGAGA 1098 Query 1020 TTTGAACTACAGAATAGCTTTGAGTTACTCAGAAACAAAGACGCTCTTGGATAAAAACGC 1079 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1099 TTTGAACTACAGAATAGCTTTGAGTTACTCAGAAACAAAGACCCTCTTGGATAAAAACGC 1158 Query 1080 TTGGGACACTCTTCTTAACAAAGATCAGCTCAAGATTGAAAGAGACGCAGGTCGAGTGTT 1139 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1159 TTGGGACACTCTTCTCAACAAAGATCAGCTCAAGATTGAAAGAGACGCAGGTCGAGTGTT 1218 Query 1140 CAAAGGATGGCACGAAGGCAAAATCTTCTTCGCACCAACTTATAAGTATTCTTATAACTC 1199 |||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||| Sbjct 1219 CAAAGGATGGCATGAAGGAAAAATCTTCTTTGCACCAACTTATAAGTACTCTTATAACTC 1278 Query 1200 TGATGCTTACGCCGGAGACACTACCAAAGAAAAGAAGAACAAGAGAAGAACTCCTGCTTG 1259 |||||||||||| |||||||||| |||||||||||||||||||||||||||||| || || Sbjct 1279 TGATGCTTACGCGGGAGACACTAGCAAAGAAAAGAAGAACAAGAGAAGAACTCCGGCCTG 1338 Query 1260 GTGCGATAGGATTCTTTGGCACGGGGATGGAATCCGGCAGCTCTCGTACGTGCGCGGCGA 1319 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1339 GTGCGATAGGATTCTTTGGCACGGTGATGGAATCCGGCAGCTCTCGTACGTGCGCGGCGA 1398 Query 1320 GTCACGATTCTCTGATCACCGGCCGGTTTGCTCCGTATTTGTCGTCGACGTTGAGGTTTG 1379 |||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct 1399 GTCACGTTTCTCCGATCATCGGCCGGTTTGCTCCGTGTTTGTCGTCGACGTTGAGGTTTG 1458 Query 1380 CGAGGGTAAAACCGGAACTAGAAGACAATAA 1410 ||||||||||||||||||||| ||||||||| Sbjct 1459 CGAGGGTAAAACCGGAACTAGGAGACAATAA 1489 > AT2G01900.1 | Symbols: | DNAse I-like superfamily protein | chr2:405918-409014 FORWARD LENGTH=1553 Length=1553 Score = 63.9 bits (34), Expect = 4e-09 Identities = 117/155 (75%), Gaps = 14/155 (9%) Strand=Plus/Plus Query 776 GCGGAATCATGGGTTGCTTAGGAAACAAGGGATGCA-TAGCTGTGAG-TTTGCAGCT-CT 832 |||| |||||||||||||||||||||||||||| || || | || || ||| || | | Sbjct 778 GCGGCATCATGGGTTGCTTAGGAAACAAGGGAT-CAGTATCGGTTAGATTT-CAATTGC- 834 Query 833 AC-AAGACTAGC-TTCTGCTTCATCTGCAGTCATCTAGCTTCTGGTGAGA-GAGAAGGAG 889 || || || | | || || ||| | || || |||||||||||||||| | | || ||| Sbjct 835 ACGAA-ACGA-CATTTTGTTTCGTTTGTAGCCATCTAGCTTCTGGTG-GCCGCGACCGAG 891 Query 890 ACGAACGTC-GCAGAAACTCAGATGTGATCGAGAT 923 | ||| | | | |||||||| || || | |||||| Sbjct 892 ATGAAAGACAG-AGAAACTCCGACGTCAACGAGAT 925 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69477554280 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5