BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg893015 Length=2238 Score E Sequences producing significant alignments: (Bits) Value AT5G08695.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) fami... 1526 0.0 AT4G19610.1 | Symbols: | nucleotide binding;nucleic acid bindi... 1074 0.0 AT5G05720.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) fami... 353 3e-96 > AT5G08695.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:2829193-2834695 FORWARD LENGTH=2643 Length=2643 Score = 1526 bits (826), Expect = 0.0 Identities = 925/971 (95%), Gaps = 14/971 (1%) Strand=Plus/Plus Query 1014 AGATAACTCTTCTAATCTGCCAAAATCATTCAAGCAAA-AGAGGGAGGAACAAAGGAAGG 1072 ||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 1087 AGATAACTCCTCTAATCTGCCAAAATCATTCAAG-AAAGAGAGGGAGGAACAAAGGAAGG 1145 Query 1073 CGTCTGAAGCTTGTGGAAACACAAAGGCTTGGAACAGTTTCTTCATGCGACCCGATACTA 1132 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1146 CGTCTGAAGCTTGTGGAAACACAAATGCTTGGAACAGTTTCTTCATGCGACCCGATACTA 1205 Query 1133 TCCTGGAAAACTTAGTCAGGTCGTATGGTGTAACAAAGAGTGAGTTACTTGACCGTGAAT 1192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1206 TCCTGGAAAACTTAGTCAGGTCGTATGGTGTAACAAAGAGTGAGTTACTTGACCGTGAAT 1265 Query 1193 GCGAAGATCCTGCAGTACGCCTTGCTTTGGGAGAAACAAAAGTGATTATGGAGACCAAAG 1252 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1266 GCGAAGATCCTGCAGTACGCCTTGCTTTGGGAGAAACAAGAGTGATTATGGAGACCAAAG 1325 Query 1253 AAGCCCTTGCTAAAGCTGGAGTACGTGTCGCCTCTTTGGAAGAATTTGCTGCACGGAAAG 1312 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1326 AAGCCCTTGCTAAAGCTGGAGTACGTGTCACCTCTTTGGAAGAATTTGCTGCACGGAAAG 1385 Query 1313 GTGATGAGAAGAACAGAAGCAAACATATTCTCTTAGTAAAGAATTTGCCATTTGCTTCCA 1372 |||| | |||||||||||||||||||||||||||||| ||| ||||||| |||||||||| Sbjct 1386 GTGACGTGAAGAACAGAAGCAAACATATTCTCTTAGTCAAGCATTTGCCCTTTGCTTCCA 1445 Query 1373 CTGAAAAGGAACTGGCTCAAATGTTCCGAAAATTTGGAAGTCTTGACAAAATTATTCTCC 1432 ||||||||||||||||||||||||| || |||||||||||||| ||||||||| |||||| Sbjct 1446 CTGAAAAGGAACTGGCTCAAATGTTTCGGAAATTTGGAAGTCTAGACAAAATTGTTCTCC 1505 Query 1433 CTCCGACGAAGACGATGGCTTTGGTTGTTTTCCTTGAACCGGCTGAGGCACGTGCAGCTT 1492 ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1506 CTCCGACTAAGACGATGGCTTTGGTTGTTTTCCTTGAAGCGGCTGAGGCACGTGCAGCTA 1565 Query 1493 TGAACGGAATGGCATACAAGCGTTACAAAGATGTTCCCCTGTATCTGGAGTGGGCTCCTC 1552 |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 1566 TGAACGGATTGGCATACACGCGTTACAAAGATGCTCCCCTGTATCTGGAGTGGGCTCCTC 1625 Query 1553 GAGATATTCTTGAACCAAAAGCACTTGCCGATAACAAAGAAGAGAAGAGTGCTGTTGAAG 1612 ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||| Sbjct 1626 GAGATATTCTTGAGCCAAAAGCACTTGCCGATAACAAAGAAAAGAAGAGTGCTGTCGAAG 1685 Query 1613 AAAATGATGCGAGAAGAGTCAACCTGGATCAGCAGGTTGGAATCTATTCGGATATAGCCG 1672 ||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| Sbjct 1686 AAAATGATGCGAGAAGAGTCAACTTAGATCAGCAGGTTGGAATCTATTCGGATATAACCG 1745 Query 1673 AGTCAAATGTCCTTCATGTAAAGAATCTGAGCTTCAAGACAACTGATGAGGGTTTGAAGA 1732 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1746 AGTCAAATGTCCTTCATGTAAAGAATCTGAGCTTCAAGACAACTGATGAGGGGTTGAAGA 1805 Query 1733 AGCATTTGACTGGACTGGTGAAGCAGGGAAAGATTCTGAGTGTTAAG-A--TAATAAGAG 1789 |||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||| Sbjct 1806 AGCATTTGACTGGAGTGGTGAAGCAGGGAAAGATTCTGAGTGTTAAGCAGATAATAAGAG 1865 Query 1790 ATTGGAAGAGACGTCGTTCAAGCGGTTATGGTTTTGTAGAATTTGACTCCGTAGAGACAG 1849 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1866 ACTGGACGAGACGTCGTTCAAGCGGTTATGGTTTTGTAGAATTTGACTCCGTAGAGACAG 1925 Query 1850 CGACCAGTGTCTACAGAGATCTACCAGTAGAGGGAAATGTTCTGGATGGGCATTCTTTGA 1909 ||||||||||||||||||||||||||| || || ||||||||||||||||||||||| Sbjct 1926 CGACCAGTGTCTACAGAGATCTACCAG--GA---AA-TGTTCTGGATGGGCATTCTTTGA 1979 Query 1910 TCTTGAGTTATTCTGAAAACAAGCGGAGTGAAACGGTTGGGGAAGGTTCAGACAAGATCA 1969 |||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1980 TCTTGAATTTTTCTGAAAACAAGCGGAGTGAAACGGTTGGGGAAGGTTCAGACAAGGTCA 2039 Query 1970 -AGAGAGTTGG 1979 | | |||||| Sbjct 2040 CA-A-AGTTGG 2048 Score = 1064 bits (576), Expect = 0.0 Identities = 853/976 (87%), Gaps = 61/976 (6%) Strand=Plus/Plus Query 15 GTCTAGGATAATCGTTAAGAATGTTCCCAAATATGTGACAGAGGATCAACTACGAGGTAT 74 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 157 GTCAAGGATAATCGTTAAGAATGTTCCCAAATATGTGACAGAGGATCAACTACGAGGTAT 216 Query 75 CTTTTCACG-AAAAGGAGAAATCACAGACGTGAAATTGAAGCGTTTAAGTGATGGCACAA 133 |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 217 CTTTTC-GGAAAAAGGAGAAATCACAGACGTGAAATTGAAGCGTTTAAGTGATGGCAGAA 275 Query 134 GTAGACAATTTGCTTATATTGGATTTCGTAATGATCAAGAAGCTCAAGATGCTATCACTT 193 |||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| Sbjct 276 GTAGACAATTTGCTTATATTGGATTTCGTAGTGAACAAAAAGCTCAAGATGCTATCACTT 335 Query 194 ACTTTAACAAGTCTTTCATTGATACTCTTCGAATATCTGTTTTGCTTGCGGACCCTCCTC 253 ||||||||||| ||||| ||| || || ||||||||||||| ||||||||||||| | Sbjct 336 ACTTTAACAAGAATTTCAAACATAGTCATCAAATATCTGTTTTGGTTGCGGACCCTCCAC 395 Query 254 C---GAGGACACAAGGGAAGGCTGATGAAAAGAGTGAACATGCTTATGCTAAAGGAGACA 310 | ||||||||||||||| | | | || ||||||||||||||||||| | Sbjct 396 CGAGGAGGACACAAGGGAA-G--G-T--------TG---ATGCTTATGCTAAAGGAGATA 440 Query 311 AAAAGATTAAGAAGAA--A-CCAGAGGCTGATCATGATCCTCAGCTTCAAGAATTTCTTC 367 || ||||| ||||||| | ||||| | |||||||||||||||||||||||||||||||| Sbjct 441 AACAGATTCAGAAGAAGGATCCAGAAGTTGATCATGATCCTCAGCTTCAAGAATTTCTTC 500 Query 368 ATGAGCATAAGAAGTTGAAATTCTGGTCCAATGACATGTGTATTCCTCCTTCCACCGGCA 427 || || | | |||||||||||||||||||||||||||||||||| |||||||| || Sbjct 501 ATCAGGAGCATAAGTTGAAATTCTGGTCCAATGACATGTGTATTCATCCTTCCAATGG-- 558 Query 428 AAGAAAAGGTCTCTCCAGTAAGTTTTTCCAATGGTGCCAAAAGATCATTCTTAGATCCTA 487 | | | | || ||| ||| ||||||||||||||||||||| ||| Sbjct 559 -TG--CTGATGAC-CC--TAA-------CAA---AGCCAAAAGATCATTCTTAGATTCTA 602 Query 488 AAAAGACTAGAAAGAATAAAGTTGGTGACGATGTTTCTGATATGGAATACTTGAAGAGTC 547 ||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| Sbjct 603 AAAAGACTAGAAAGAGTAAAGTTGGTGATGATGTTTCTGATATGGAATACTTCAAGAGTC 662 Query 548 GGATAAAGAAAAATCTGTCGGATTCGGACAGTGATTGTGAAACTGATAGTCGTGAAGATG 607 ||||||||||||| || | |||||||||||||||||| |||||||||||||||| Sbjct 663 GGATAAAGAAAAA----TC----T-GGACAGTGATTGTGAAACCGATAGTCGTGAAGATG 713 Query 608 CAATTC-ATGTTTTTCCTATTGATGGAGAAGTTGAAGCTGACAGAGTCGACAAAgatgat 666 ||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 714 CAA-TCAATGTTTTTCCTATTGATGGAGAAGTTAAAGCTGACAGAGTCGACAAAGATGAT 772 Query 667 gatgatgatg--atggccatgca-atg--gatggcagtgatgatgTTCTTGACACTAGTC 721 |||| ||| |||| | | | | | |||||||||||||||||||||||| || ||| Sbjct 773 GATGGCCATGCAATGG--AGGTAGAAGCCGATGGCAGTGATGATGTTCTTGACGCTGGTC 830 Query 722 GCCTTTTCGTCCATGGCCTGCCTTACTCTA-CAGCAGAAGAAGAGCTTACGGAACATTTC 780 |||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||| Sbjct 831 GCCTTTTCGTCCATGGCCTGCCTTACTCTACCA-CAGAAGAAGAGCTTATGGAACATTTC 889 Query 781 AGCAAATTCGGTGATATATCAGAGGTCCATCTTGTTCTTGACAAGGATACTAGAAATCCC 840 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | Sbjct 890 AGCAAATTCGGTGATATATCAGAGGTCCATCTTGTTCTTGACAAGGATACCAGAAGTTGC 949 Query 841 AGAGGAATGGCCTACGTCCTTTACCTGATACCGGAATCTGCAAAAAGGGCAATGGAGAAA 900 || |||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct 950 AGGGGAATGGCCTTCGTCCTTTACCTGATACCGGAATCTGCAAAAATGGCAATGGATAAA 1009 Query 901 TTAGATAAGTTACCTTTCCAGGGGCGGACGTTGCATATTTTACCAGCTAAGCCCTGTGCA 960 ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct 1010 TTAGATAAGTTACCTTTCCAGGGCCGGACGTTGCATATTTTACCAGCTAAGCCCCGTGCA 1069 Query 961 AAGTCTGCTAAACAAG 976 | |||||||||||||| Sbjct 1070 ATGTCTGCTAAACAAG 1085 Score = 363 bits (196), Expect = 6e-99 Identities = 265/295 (90%), Gaps = 17/295 (6%) Strand=Plus/Plus Query 1960 GACAAGA-TCAAGAGAGTTGGGCTTCCATTGAAGACTGTGGGAAAATATGCTGGTTTTGG 2018 ||| ||| ||||||||||||||||||||||||||| |||| ||||||| ||||||| || Sbjct 2121 GAC-AGATTCAAGAGAGTTGGGCTTCCATTGAAGAATGTGAGAAAATACGCTGGTTATGC 2179 Query 2019 TTTTGTTGAATTTGGGACAATGCAAGAAGCTTTAAACGCTAAAAAGGCATTCTCCAACAC 2078 |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 2180 TTTTGTAGAATTTGGGACAATGCAAGAAGCTTTAAACGCTAAAAAGGCACTCTCCAACAC 2239 Query 2079 CCATTTCTATGGACGCCAATTGGTGCTCGAGTGGGCTCATGATGAC-A-AG-A-G-AA-- 2131 |||||||||||||||||| ||||||||||||||||||| ||||||| | || | | || Sbjct 2240 CCATTTCTATGGACGCCATTTGGTGCTCGAGTGGGCTCGTGATGACGAGAGCATGGAAGC 2299 Query 2132 -A---A----TCTTGTGCTGCCAAGTATATGGACCAAGAAAACGATAATCCAAAGAAAAG 2183 | | |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2300 GATTCAAAAATCTTGTGCTGCCAAGTATATGGGCCAAGAAAACGATAATCCAAAGAAAAG 2359 Query 2184 GAAAAGATGGACAGTTGTTGGTAGAGGTAGAGAGACGTCAAAGAAAAGGTTATAG 2238 |||||| | ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2360 GAAAAGCTCGACAGTTGTTGGTAGTGGTAGAGAGACGTCAAAGAAAAGGTTATAG 2414 > AT4G19610.1 | Symbols: | nucleotide binding;nucleic acid binding;RNA binding | chr4:10677229-10681771 FORWARD LENGTH=2852 Length=2852 Score = 1074 bits (581), Expect = 0.0 Identities = 842/963 (87%), Gaps = 38/963 (4%) Strand=Plus/Plus Query 1022 CTTCTAATCTGCCAAAATCATTCAAGCAAAAGAGGGAGGAACAAAGGAAGGCGTCTGAAG 1081 ||||||| ||||||||| |||||||||| ||||| ||||||||||| ||||| ||||||| Sbjct 1401 CTTCTAACCTGCCAAAAACATTCAAGCAGAAGAGAGAGGAACAAAGAAAGGCATCTGAAG 1460 Query 1082 CTTGTGGAAACACAAAGGCTTGGAACAGTTTCTTCATGCGACCCGATACTATCCTGGAAA 1141 || ||||| | |||||||||||||| ||||| |||||||||||||||||||| || |||| Sbjct 1461 CTGGTGGAGATACAAAGGCTTGGAATAGTTTATTCATGCGACCCGATACTATTCTAGAAA 1520 Query 1142 ACTTAGTCA-GGTCGTATGGTGTAA-CAAAGAGTGAGTTACTTGACCGTGAATGC-GAAG 1198 || |||||| ||| ||||||||||| | |||||||||||||||||||||||| || |||| Sbjct 1521 ACATAGTCAGGGT-GTATGGTGTAAGC-AAGAGTGAGTTACTTGACCGTGAA-GCTGAAG 1577 Query 1199 ATCCTGCAGTACGCCTTGCTTTGGGAGAAACAAAAGTGATTATGGAGACCAAAGAAGCCC 1258 ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1578 ATCCTGCTGTACGCCTTGCTTTGGGAGAAACAAAAGTGATTGCGGAGACCAAAGAAGCCC 1637 Query 1259 TTGCTAAAGCTGGAGTACGTGTCGCCTCTTTGGAAGAATTTGCTGCACGGAAAGGTGATG 1318 |||| |||||||||||| ||| | ||||||||| |||||||| || |||| ||||||| Sbjct 1638 TTGCGAAAGCTGGAGTAAATGTTACTTCTTTGGAAAAATTTGCTACAAGGAATGGTGATG 1697 Query 1319 AGAAGAACAGAAGCAAACATATTCTCTTAGTAAAGAATTTGCCATTTGCTTCCACTGAAA 1378 |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1698 AGAAAAACCGAAGCAAACATATCCTCTTAGTAAAGAATTTGCCATTTGCTTCCACTGAAA 1757 Query 1379 AGGAACTGGCTCAAATGTTCCGAAAATTTGGAAGTCTTGACAAAATTATTCTCCCTCCGA 1438 ||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||| Sbjct 1758 AGGAACTGGCTCAAATGTTTGGAAAATTTGGAAGTCTAGACAAAATTATCCTCCCTCCGA 1817 Query 1439 CGAAGACGATGGCTTTGGTTGT-TTTCCTTGAACCGGCTGAGGCACGTGCAGCT-TTGAA 1496 ||||||||||||| |||| ||| |||| | || |||||||||||||| |||||| || || Sbjct 1818 CGAAGACGATGGCCTTGGCTGTGTTTC-TGGAGCCGGCTGAGGCACGCGCAGCTCTT-AA 1875 Query 1497 CGGAATGGCATACAAGCGTTACAAAGATGTTCCCCTGTATCTGGAGTGGGCTCCTCGAGA 1556 |||||||||||||||||||||||||||| |||| |||||||||||||||||||| || | Sbjct 1876 GGGAATGGCATACAAGCGTTACAAAGATGCTCCCTTGTATCTGGAGTGGGCTCCTGGAAA 1935 Query 1557 TATTCTTGAACCAAAAGCA-CTTGCC-GATAACAAAGAAGAGAAGA-GTG-CTGTTGAAG 1612 ||||||||| |||||| | ||| || || | ||| ||||||| || ||| | |||||| Sbjct 1936 TATTCTTGAGCCAAAAA-ATCTT-CCTGACACCAATGAAGAGA-GAAGTGACA-TTGAAG 1991 Query 1613 AAAATGATGCGAGAAGAGTCAACCTGGATCAGCAGGTTGGAATCTATTCGGATATAGCCG 1672 |||||| | ||||||||||||| |||| |||||||||| |||| || | ||| || | | Sbjct 1992 AAAATGGCGTGAGAAGAGTCAACTTGGAGCAGCAGGTTGAAATCGATCCAGATGTAACTG 2051 Query 1673 AGTCAAATGTCCTTCATGTAAAGAATCTGAGCTTCAAGACAACTGATGAGGGTTTGAAGA 1732 |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2052 AGTCAAATGTCCTTAATGTTAAGAATCTGAGCTTCAAGACAACTGATGAGGGTTTGAAGA 2111 Query 1733 AGCATTTGACTGGACTGGTGAAGCAGGGAAAGATTCTGAGTGTTAAGATAATAAGAG-AT 1791 ||||||| ||| |||||||||||||||||||||||| ||||| | |||||||| || || Sbjct 2112 AGCATTTCACTAAACTGGTGAAGCAGGGAAAGATTCTCAGTGTCACGATAATAA-AGCAT 2170 Query 1792 TG---GAA-GAGACGT--CGTTCAAGCGGTTATGGTTTTGTAGAATTTGACTCCGTAGAG 1845 ||| |||| || | ||||||||||||||||||||||||||| ||||| |||||| Sbjct 2171 AAAAAGAATGAGAAGTATCTTTCAAGCGGTTATGGTTTTGTAGAATTCGACTCTGTAGAG 2230 Query 1846 ACAGCGACCAGTGTCTACAGAGATCTACCAGTAGAGGGAAATGTTCTGGATGGGCATTCT 1905 ||||| |||||||||||||||||||||| || | || | |||||||||||||||| || Sbjct 2231 ACAGCCACCAGTGTCTACAGAGATCTAC-AG--G-GG-AC-TGTTCTGGATGGGCATGCT 2284 Query 1906 TTGATCTTGAGTTATTCTG--AAAACAAGCGGAGTGA-AACGGTTGGGGAAGGTTCAGAC 1962 ||||||||||| |||||| |||||||||||||||| || |||||| ||| |||| || Sbjct 2285 TTGATCTTGAG--ATTCTGTGAAAACAAGCGGAGTGACAA-GGTTGGAAAAGATTCAAAC 2341 Query 1963 AAG 1965 ||| Sbjct 2342 AAG 2344 > AT5G05720.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:1716871-1719541 FORWARD LENGTH=1356 Length=1356 Score = 353 bits (191), Expect = 3e-96 Identities = 287/331 (87%), Gaps = 16/331 (5%) Strand=Plus/Plus Query 15 GTCTAGGATAATCGTTAAGAATGTT-C--CCAAATATGTGACAGAGGATCAACTACGAGG 71 |||| ||||||||||||||||| || | ||||| ||||||||||||| | ||| |||| Sbjct 3 GTCTTGGATAATCGTTAAGAATCTTCCTTCCAAACATGTGACAGAGGAACGACTTCGAGA 62 Query 72 TATCTTTTCACGAAAAGGAGAAATCACAGACGTGAAATTGAAGCGTTTAAGTGATGGCAC 131 | ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 63 TGTCTTTTCACGAAAAGGAGAAATCGCAGACGTGAAATTGAAGCGTAAAAGTGATGGCAA 122 Query 132 AAGTAGACAATTTGCTTATATTGGATTTCGTAATGATCAAGAAGCTCAAGATGCTATCAC 191 |||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||| Sbjct 123 AAGTAGACAATTTGCTTATATTGGCTTTCGTACTGAACAAGAAGCTCAAGATGCTATCAC 182 Query 192 TTACT-TTAACAAGTCTTTCATTGATACTCT-TCGAATATCTGTTTTGCTTGCGGACCCT 249 || | ||||||||| ||||||||||||| | ||||||||||||| | ||||||||||| Sbjct 183 ATA-TGTTAACAAGTGTTTCATTGATACT-TATCGAATATCTGTTGAGGTTGCGGACCCT 240 Query 250 CCTCCGA-GGACACAAGGGAAGG---CTGA-TGAA-AAGAGTGAACATGCTTATGCTAAA 303 ||||||| ||| | ||||||||| | | |||| | | | |||||||||||||| Sbjct 241 CCTCCGAGGGA-AGAAGGGAAGGAAAAT-ACTGAACATTTTTCTA-ATGCTTATGCTAAA 297 Query 304 GGAGACAAAAAGATTAAGAAGAAACCAGAGG 334 ||||||||||||||||||||||||||||||| Sbjct 298 GGAGACAAAAAGATTAAGAAGAAACCAGAGG 328 Score = 291 bits (157), Expect = 3e-77 Identities = 291/350 (83%), Gaps = 31/350 (9%) Strand=Plus/Plus Query 1456 GTTGTTTTCCTTGAACCGGCTGAGGCACGTGCAGCTTTGAACGGAAT-GGCATACAAGCG 1514 |||||||||||||||||| ||||||||||| |||| |||| ||||| ||| |||||||| Sbjct 610 GTTGTTTTCCTTGAACCGATTGAGGCACGTGAAGCTCTGAAGGGAATGGGCGTACAAGCG 669 Query 1515 TTACAAAGATGTTCCCCTGTATCTGGAGTGGGCTCCTCGAGATATTCTTGAACCAAAAGC 1574 ||||||||||| |||||||||||| | |||||||| ||||||||||||| |||||||| Sbjct 670 TTACAAAGATGCTCCCCTGTATCT---G-GGGCTCCTAGAGATATTCTTGAGCCAAAAGC 725 Query 1575 ACTTGCCGATAACAAAGAAGAGAAGAGTGCTGTTGAAGAAAATGATGCGAGAAG-AG--T 1631 ||||||||||||||| ||| | | ||||| ||||||||||||||||| |||||| || | Sbjct 726 ACTTGCCGATAACAATGAAAATACGAGTGATGTTGAAGAAAATGATGTGAGAAGAAGACT 785 Query 1632 CAACCTGGATCAGCAGGTTGGAATCTATTCGGATATAGCCGA-G--T---CA---AATG- 1681 |||| |||||||||||||||||||| ||||||||||| | || | | || ||| Sbjct 786 CAACTTGGATCAGCAGGTTGGAATCGATTCGGATATAACTGAGGTATGCCCACTTTATGA 845 Query 1682 -TCCT-T---C---ATGTAA--A-G-AATCTGAGCTTCAAGACAACTGATGAGGGTTTGA 1729 | || | | || || | | | ||||| ||||||||| ||||||||| |||||| Sbjct 846 TTGCTGTGGACGTTTTGAAACCATGTATTCTGAACTTCAAGAC-ACTGATGAGAGTTTGA 904 Query 1730 AGAAGCATTTGACTGGACTGGTGAAGCAGGGAAAGATTCTGAGTGTTAAG 1779 ||||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct 905 AGAAGCATTTGACTGAACTGGTGAAGCAGGGAAAGATTCTGAGTTTTAAG 954 Score = 226 bits (122), Expect = 8e-58 Identities = 145/156 (93%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 508 GTTGGTGACGATGTTTCTGATATGGAATACTTGAAGAGTCGGATAAAGAAAAATCTGTCG 567 |||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct 418 GTTGGTGATGATGTTTCTGATATGGAATACTACAAGAGTCGGACAAAGAAAAATCTGTCG 477 Query 568 GATTCGGACAGTGATTGTGAAACTGATAGTCGTGAAGATGCAATTCATGTTTTTCCTATT 627 |||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| Sbjct 478 GATTCGGACAGTGATTGTGAAACTTATGGTTGTGAAGATGCAATTCATGTTTTTCCTATT 537 Query 628 GATGGAGA-AGTTGAAGCTGACAGAGTCGACAAAga 662 ||||| || | |||||||||||||||| |||||||| Sbjct 538 GATGGGGATA-TTGAAGCTGACAGAGTTGACAAAGA 572 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 111043605540 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5