BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg893370 Length=822 Score E Sequences producing significant alignments: (Bits) Value AT5G14660.1 | Symbols: PDF1B, DEF2, ATDEF2 | peptide deformylas... 1291 0.0 > AT5G14660.1 | Symbols: PDF1B, DEF2, ATDEF2 | peptide deformylase 1B | chr5:4726641-4728746 REVERSE LENGTH=1288 Length=1288 Score = 1291 bits (699), Expect = 0.0 Identities = 781/822 (95%), Gaps = 0/822 (0%) Strand=Plus/Plus Query 1 ATGGCCGTCTGTAACTGCTTCCTCCAAGCTCCACCACTCTCTCGCTTATTCTTACCGGTT 60 ||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| Sbjct 76 ATGGCCGTCTGTAACTGCTTCCTCCAAGCTCCACCACTCTCTCGCATACTCCTACCGGTT 135 Query 61 TTATCTCGCCGAGCTACTACACTCTCTGCCGGTTATGGTCGGCTCAAATCCACCGTCATG 120 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| | Sbjct 136 TTATCTCGCCGAGCTACTACTCTCTCTGCCGGTTATGGTCGGCTCAAATCCACGGTCACG 195 Query 121 TTCTGCTCTACTGGGAACCGGACCAGTCTTCTGATATCTCCGGTTCGCGCTGAAGTAAAG 180 ||||||||||||| |||||||||||||| ||||| |||| |||| ||||| ||||||||| Sbjct 196 TTCTGCTCTACTGTGAACCGGACCAGTCCTCTGACATCTTCGGTCCGCGCAGAAGTAAAG 255 Query 181 CGCGTCTCACGTAAAGACGTTGAAGTAGCTTCAGCTTCTGATCTTCAATTTGAGACTCCT 240 |||||||| |||||||||| | |||||||||||||| ||||| ||||||||||||| ||| Sbjct 256 CGCGTCTCGCGTAAAGACGATAAAGTAGCTTCAGCTACTGATGTTCAATTTGAGACGCCT 315 Query 241 TTGAGGATTGTTGAGTATCCGGATCCTATACTACGGGCTAAGAACAAGAGGATTGGTGTT 300 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 316 TTGAAGATTGTTGAGTATCCGGATCCTATACTACGGGCTAAGAACAAGAGGATTGATATT 375 Query 301 TTCGACCAGAATTTGAAGAACTTGGTTGATGCTATGTTTGATGTTATGTACAAAACGGAT 360 || ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 376 TTTGACGAGAATTTAAAGAACTTGGTTGATGCTATGTTTGATGTTATGTACAAAACGGAT 435 Query 361 GGTATTGGGCTCTCAGCACCACAAGTAGGTCTCAATGTTCAACTTATGGTGTTTAATCCA 420 || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 436 GGCATTGGGCTCTCAGCACCACAAGTAGGTCTCAATGTTCAACTCATGGTGTTTAATCCA 495 Query 421 GCTGGGGAGCCTGGTGAAGGAGAAGAAATTGTTCTTGTAAATCCGATTATCAAGAAATAT 480 ||||| |||||||| |||||| |||||||||| ||||||||||||| |||||||||||| Sbjct 496 GCTGGAGAGCCTGGAGAAGGAAAAGAAATTGTCCTTGTAAATCCGAAAATCAAGAAATAT 555 Query 481 TCCGATAAGTTAGTACCGTTTGATGAAGGATGCCTATCCTTCCCCGGGATCTATGCTGAA 540 |||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 556 TCCGATAAATTAGTACCGTTTGATGAAGGATGCCTCTCCTTCCCGGGGATCTATGCTGAA 615 Query 541 GTAGTTCGACCACAATCTGTCAAGATTGATGCAAGGGACATTACTGGTGAAAGATTTTCA 600 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 616 GTTGTTCGACCACAATCTGTCAAGATTGATGCAAGGGATATTACTGGTGAAAGATTTTCA 675 Query 601 ATTAGTCTATCTCGTTTACCTGCACGAATCTTTCAGCACGAATATGACCATCTGGAGGGA 660 || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 676 ATCAGTCTATCACGTTTACCTGCACGAATCTTTCAGCACGAATACGACCATCTGGAGGGA 735 Query 661 GTTCTCTTCTTTGACAGAATGACGGATCAAGTTCTTGATAGCATTCGTGAAGAGCTAGAG 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 736 GTTCTCTTCTTTGACAGAATGACGGATCAAGTTCTTGATAGCATTCGTGAAGAGCTAGAG 795 Query 721 GCCCTAGAAAAGAAGTACGAAGAAAAAACTGGATTGCCAAGCCCTGAAAGAGTACAAGCA 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 796 GCCCTAGAAAAGAAGTACGAAGAAAAAACTGGATTGCCAAGCCCTGAAAGAGTAGAAGCA 855 Query 781 CGACAAAAAAGGAAAGCAGGAGTTGGTTTTGGCAAACGTTGA 822 |||||||||||||||||||||||||||||||||||||||||| Sbjct 856 CGACAAAAAAGGAAAGCAGGAGTTGGTTTTGGCAAACGTTGA 897 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40036615159 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5