BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg894258
Length=1719
Score E
Sequences producing significant alignments: (Bits) Value
AT5G23770.2 | Symbols: DUF8 | DOMAIN OF UNKNOWN FUNCTION 724 8 ... 1271 0.0
AT5G23780.1 | Symbols: DUF9, ATDUF9 | DOMAIN OF UNKNOWN FUNCTIO... 942 0.0
AT5G23800.1 | Symbols: ATDUF10, DUF 10 | DOMAIN OF UNKNOWN FUNC... 747 0.0
> AT5G23770.2 | Symbols: DUF8 | DOMAIN OF UNKNOWN FUNCTION 724
8 | chr5:8014381-8016913 REVERSE LENGTH=2027
Length=2027
Score = 1271 bits (688), Expect = 0.0
Identities = 1005/1152 (87%), Gaps = 46/1152 (4%)
Strand=Plus/Plus
Query 600 GTCCTTGAGCTGCAAGAGTAGTAAGTC-AGAACCCAACAAAATCGTTGATTTG-CGTAGT 657
|||||| |||||| || | | ||| | || ||||||||||| |||||||||| | ||||
Sbjct 758 GTCCTTTAGCTGCGAGGGAAAAAAGGCAAG-ACCCAACAAAACCGTTGATTTGTC-TAGT 815
Query 658 CTTAGGCCTACACCGCCTTCTATTTCGA-TTGATGAGTATCAATCGGAGGAATACGTAGA 716
|||||||||| | || || || | |||| |||||||| | ||||||| |||||||
Sbjct 816 CTTAGGCCTATA---CC-AGTA--TC-AGTTGACGAGTATCAGTTGGAGGAAAACGTAGA 868
Query 717 GGTGTTTCATGGTGGTATGGGATGGCGTCAAGGACGAGTGAT--G--G----GA---A-C 764
|||||||| || ||||||||| |||||||| ||||||||||| | | || | |
Sbjct 869 GGTGTTTCTTGATGGTATGGGGTGGCGTCATGGACGAGTGATGGGAAGTCAAGAGCGAGC 928
Query 765 --T-------CTCTCTCAGAAATTGTATACAGTGCTTTTAGAGGCTACAAAGAAAG-AAT 814
| ||||||||||||| |||| |||| ||| || |||||||| ||| |||
Sbjct 929 GATAGGAACACTCTCTCAGAAATGGTATTTTGTGCGTTTGGAATCTACAAAG-AAGCAAT 987
Query 815 TGGTATTCAAACACTCGGATCTTAGGCCTTTGAAGGTTTGGGAAGATGGCATTTGGAAGA 874
| ||||| || ||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 988 TAACGTTCAAGCAGTCGGATCTTAGGCCTTTGAAGGTGTGGGAAGATGGCGTTTGGAAGG 1047
Query 875 TGTTGCAGACAAGGGAATCGCCGTTAACTCAGAAATCAGGATATAAGA-TGAGTGATTCA 933
|||||||||||||||||| | |||| |||||| ||||||| |||||| | |||||||
Sbjct 1048 TGTTGCAGACAAGGGAATTGTCGTTTACTCAGGGATCAGGAGATAAGACCG-GTGATTCT 1106
Query 934 GTGATGAATGCAAATGAATCTGATCCACCTGTAACTCCACCTCCGGGCATAACTATAACA 993
|||| ||||||||||||||||||||||||| ||||||||||||||||||||| || | ||
Sbjct 1107 GTGAGGAATGCAAATGAATCTGATCCACCTTTAACTCCACCTCCGGGCATAATTACACCA 1166
Query 994 CCGTTGAAACAAGA-AGAGGCTGAAACTCAAAGAAAGACATTCCCCAAGAAGACACTTCC 1052
|||||||||||| | |||||||| ||||||||||||| || || ||||||||||||||||
Sbjct 1167 CCGTTGAAACAA-ATAGAGGCTGGAACTCAAAGAAAGGCACTCTCCAAGAAGACACTTCC 1225
Query 1053 AAGGAATCAGAATGGTTCAGGAAACGATTCAACACGAGAGAATGAAAATATCGAAGATGT 1112
||||||||||||||| || |||||||||||||| | |||||||||||||| |||||||
Sbjct 1226 AAGGAATCAGAATGGCTCGGGAAACGATTCAACGCTAGAGAATGAAAATAGCGAAGATAA 1285
Query 1113 TAATCGAAAGAGGAAAAGAGAAGAAAACCTTTGTTCTGATGCTAGTGCTGAGGAAGACAA 1172
|||||||||||||||||||||||||||||| ||| || |||||||| |||| |||||||
Sbjct 1286 CAATCGAAAGAGGAAAAGAGAAGAAAACCTTGGTTGTGTTGCTAGTGTTGAGCAAGACAA 1345
Query 1173 AGCAAAGGATACAAGAATGGTTTTGCCCTTTGAGAAGAAGTTACGAATTTGGAAGACACT 1232
| |||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct 1346 ACCAAAGGATACAACAATGGTTTTACCCTTTGAGAAGAAGTTACGAATTTGGGAGACACT 1405
Query 1233 AGAATCAATGGAGGTGTTTAAAACAGTCCCACAAAGTCCTCATTTCAGCCCATT---GGT 1289
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 1406 AGAATCAATGGAGGTGTTTAAAACAGTCCCACAGAGTCCTCATTTCAGCCCATTATTGGT 1465
Query 1290 GGAGAGTAGAGAAGATTCCCGTGAAATGTCTGCGGTTGGTATGATGCTTACCTTTTCTGG 1349
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1466 GGAGAGTAGAGAAGACTCCCGTGAAATGTCTGCGGTTGGTATGATGCTTACCTTTTTTGG 1525
Query 1350 TTTACTTGATGAAGTCAAAGCTCTGCAACACGATGATCCCATAAGCTCATTCGATA-GCC 1408
||||||||||||||||||||||||||||||| | ||||||||||||| || ||| |||
Sbjct 1526 TTTACTTGATGAAGTCAAAGCTCTGCAACACAACGATCCCATAAGCTTTTTT-ATAAGCC 1584
Query 1409 TTAATGATTCCTTTT-CCAAGTTAGAGAAACACGGGCTCAATGTAAAAGTACCTCAGTTA 1467
| | | |||| |||| || ||||||||||||||||| |||||||||||| |||||||| |
Sbjct 1585 TCACTAATTC-TTTTGCCGAGTTAGAGAAACACGGGTTCAATGTAAAAGCACCTCAGTCA 1643
Query 1468 CGGCTCAATAAGCTGTTGTCTCTCAGAGATAGACAATCAATGAAAACAGAGGAACTCAAA 1527
||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1644 CGGATCAATAAGCTGTTGTCTCTCAGAGATAGACAATCAAAGAAAACAGAGGAACTCAAA 1703
Query 1528 GGTGCCGAGAAAGTGACGGCAGAGAAAGAGAGCGTAAAGGCTGAGAACGAGCGCAAGATT 1587
| ||||||||||||||| |||||||||||||||||||| ||||||||| | |||||||||
Sbjct 1704 GATGCCGAGAAAGTGACCGCAGAGAAAGAGAGCGTAAAAGCTGAGAACAAACGCAAGATT 1763
Query 1588 CTCGAGCTGCAGAGGCTGAATGAGGAGATGGACAAAGAGATAGCTCAAAGTAAGTCATGT 1647
|| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1764 CTTGAGCTGCAAAGGCTAAATGAAGAGATGGACAAAGAGATAGCTCAAAGTAAGTCATGT 1823
Query 1648 GCAACAAAGATTGTCCAACAGCTTGATGATGTGAAGCTTGAGTTTAAGGCAACTGCATCA 1707
||| ||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||
Sbjct 1824 GCAGCAAAGATTGTCCAACAGCTCGATGATGTGAAGCTTGAGTTTCTGGCAACAGCATCA 1883
Query 1708 GCTCCATGGTAA 1719
||||||||||||
Sbjct 1884 GCTCCATGGTAA 1895
Score = 337 bits (182), Expect = 3e-91
Identities = 283/330 (86%), Gaps = 14/330 (4%)
Strand=Plus/Plus
Query 278 GCATTCCTATCAAGATAGGCTGCATCGTTGAAGCTGATTATAAATATGCGTGGGTCACTG 337
||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||
Sbjct 382 GCATTCCTATCAAGATAGGCTCCATCGTCGAAGCTGATTATAAAGATGCGTGGGTCACTG 441
Query 338 GTTTTGTGGTCAAAGAGATTGATGATTA-CAAGTGTTTGGTGTGTTTTTATTCACCACCT 396
|||||||||||||||||||||||| || ||||||||||||||| ||| ||||| ||||
Sbjct 442 GTTTTGTGGTCAAAGAGATTGATG-TTGGCAAGTGTTTGGTGTGCTTTGATTCAATACCT 500
Query 397 GATATTATTCACTTTGAGAGAAAGCTTTTGAGGCCTTATCTTGAGTGGCTTGGTGAGAG- 455
||| |||||| |||||||||||||||||||||||| ||||| ||||||| | ||| ||
Sbjct 501 GATGTTATTCTGTTTGAGAGAAAGCTTTTGAGGCCTCATCTTCAGTGGCTCGATGATAGT 560
Query 456 GAGAGACCCAGGTTGG--T-TCGGAACATC-ACGGCGTAAT-GAAAAGTTCTTGAGGCGG 510
| || | || |||| | | || | || | | | || |||| ||||||||| |||
Sbjct 561 G-GATATACATTTTGGGATAT-GGTA--TCGAAA-CATTATCGAAA-GTTCTTGAGACGG 614
Query 511 TTAGCTGAGGAGCCTATGTTTAGTCCCGGAACAATGGTGGAAGTGAGTTCTAAGATAAAT 570
|| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 615 TTGGCTGAAGAGCCTATGTTTAGTCCTGGAACAATGGTGGAAGTGAGTTCTAAGATAAAT 674
Query 571 GAAACTGAAGTCGTTTGGGTTCCTGCAATG 600
||| ||||||||||||||||||| |||||
Sbjct 675 GAAGGTGAAGTCGTTTGGGTTCCTTCAATG 704
Score = 198 bits (107), Expect = 1e-49
Identities = 176/208 (85%), Gaps = 10/208 (5%)
Strand=Plus/Plus
Query 12 TGGGAGTGGAATG-CCTTCCATGGAGGAAGGTTGTGAATTCGAAATCTCTTACAGAATGG 70
||||||| ||| | |||||||||||||||||||||||||||||||||| | | | || ||
Sbjct 173 TGGGAGT-GAAAGACCTTCCATGGAGGAAGGTTGTGAATTCGAAATCTATAATAAAAAGG 231
Query 71 ATCCGACATCTCT-TCGTATTATGTCTA-CA-T-G---TATCTTAGAAGACATTCGGTAC 123
|||||| |||| | || | ||| || || | | | ||||||||||||| || |||||
Sbjct 232 ATCCGAGATCT-TATCATCTTACGTTTAGAAGTCGAAATATCTTAGAAGACGTTTGGTAC 290
Query 124 AAAGCTATTGTCGTGGCAAAACCTCCCAAGAATCCCAAATCTAGACGCAGTGTACTCTGT 183
||||| || |||| |||||||||||| |||| ||||||||||| ||||||||||||||||
Sbjct 291 AAAGCCATCGTCGAGGCAAAACCTCCAAAGAGTCCCAAATCTAAACGCAGTGTACTCTGT 350
Query 184 GTTCGGTTGCTTAAGGATGACTTTTCGA 211
||||||||||||||||| ||||| ||||
Sbjct 351 GTTCGGTTGCTTAAGGACGACTTCTCGA 378
> AT5G23780.1 | Symbols: DUF9, ATDUF9 | DOMAIN OF UNKNOWN FUNCTION
724 9 | chr5:8017192-8019026 REVERSE LENGTH=1380
Length=1380
Score = 942 bits (510), Expect = 0.0
Identities = 839/988 (85%), Gaps = 61/988 (6%)
Strand=Plus/Plus
Query 743 GTCAAGGACGAGTGATGGGAACTCTCTCTCAGAAATTG-TATACAGTGCTTTTAGAGGCT 801
||||||||||||||||||||| ||||||||||||| || |||| |||||| |||||||||
Sbjct 344 GTCAAGGACGAGTGATGGGAAATCTCTCTCAGAAA-TGTTATATAGTGCTGTTAGAGGCT 402
Query 802 ACAAAGAAAG-AATTGGT-ATTCAAACACTCGGATCTTAGGCCTTTGAAGGTTTGGGAAG 859
|||||| ||| || | | ||||||||| || ||||||||||||||| |||| |||||||
Sbjct 403 ACAAAG-AAGCAAAT-ATCATTCAAACAGTCAGATCTTAGGCCTTTGCAGGTGTGGGAAG 460
Query 860 ATGGCATTTGGAAGATGTTGCAGACAAGGGAATCGCCGTTAACTCAGAAATCAGGATATA 919
|||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||
Sbjct 461 ATGGTGTTTGGAAGATGTTGCAGACAAGGGAATCGTCGTTAACTCAGGGATCAGGAGATG 520
Query 920 AGATGAGTGATTCAGTGATGAATGCAAATGAATCTGATCCACCTGTAACTCCACCTCCGG 979
||| |||||||| |||| |||||||||||||||||||||||| |||||||||| |||||
Sbjct 521 AGACCAGTGATTCTGTGAGGAATGCAAATGAATCTGATCCACCGGTAACTCCACGTCCGG 580
Query 980 GCATAACTATAACACCGTTGAAACAAGA-AGAGGCTGAAACTCAAAGAAAGACATTCCCC 1038
||||||||| | |||||||||||||| | |||||||||||||| ||||
Sbjct 581 GCATAACTACACCACCGTTGAAACAA-ATAGAGGCTGAAACTC----AAAG--------- 626
Query 1039 AAGAAGACACTTCCAAGGAATCAGAATGGTTCAG-GAAACGATTCAACACGAGAGAATGA 1097
| ||||||||||| ||||||||||||| ||||| | |||||||||||||||||||||||
Sbjct 627 -A-AAGACACTTCCGAGGAATCAGAATGCTTCAGTG-AACGATTCAACACGAGAGAATGA 683
Query 1098 AAATA-TCGAAGATGTTAATCGAAAGAGGAAAAGAGAAGAAAACCTTTGTTCTGATGCTA 1156
||||| | |||||| |||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 684 AAATAGT-GAAGATATTAATCGAAAAAGGAAAAGAGAAGAAAGCCTTTGTTCTGATGCTA 742
Query 1157 GTGCTGAGGAAGACAAAGCAAAGGATACAAGAATGGTTTTGCCCTTTGAGAAGAAGTT-A 1215
||| ||| | ||| | | | || |||| |||||| ||||| ||||||||
Sbjct 743 GTGTTGA-G--GAC--A-C-----A-AC---AATGACTTTGCCATTTGAAAAGAAGTTGT 787
Query 1216 CGAATTTGGAAGACACTAGAATCAATGGAGGTGTTTAAAACAGTCCCACAAAGTCCTCAT 1275
| ||||||||||||||| |||||| |||| | |||||||||||||||||||||
Sbjct 788 C-AATTTGGAAGACACTTGAATCAGTGGA---G------ACAGTCCCACAAAGTCCTCAT 837
Query 1276 TTCAGCCCATTGGTGGAGAGTAGAGAAGATTCCCGTGAAATGTCTGCGGTTGGTATGATG 1335
|||||||| ||||| |||| ||||||||||| ||||||||||||||||||||| ||||||
Sbjct 838 TTCAGCCCGTTGGTTGAGACTAGAGAAGATTGCCGTGAAATGTCTGCGGTTGGGATGATG 897
Query 1336 CTTACCTTTTCTGGTTTACTTGATGAAGTCAAAGCTCTGCAACACGATGATCCCATAAGC 1395
|| |||||| || |||||||||| ||||||||| ||||||||||||| || ||||||||
Sbjct 898 CTCACCTTTCCTTGTTTACTTGAGGAAGTCAAATCTCTGCAACACGACAATTCCATAAGC 957
Query 1396 TCATTCGATA-GCCTTAATGATTCCTTTTCCAAGTTAGAGAAACACGGGCTCAATGTAAA 1454
||||| |||| |||| | | || ||||| | || |||||||||||||| ||||||||||
Sbjct 958 TCATT-GATAAGCCTCAGTAATAACTTTTGCGAGCTAGAGAAACACGGGTTCAATGTAAA 1016
Query 1455 AGTACCTCAGTTACGGCTCAATAAGCTGTTGTCTCTCAGAGATA-GACAATCAATGAAAA 1513
| |||||||| |||| ||| ||||||||||||||| |||| || | |||||||||||||
Sbjct 1017 GGCACCTCAGTCACGGATCAGTAAGCTGTTGTCTCTTAGAGGTAAG-CAATCAATGAAAA 1075
Query 1514 CAGAGGAACTCAAAGGTGCCGAGAAAGTGACGGCAGAGAAAGAGAGCGTAAAGGCTGAGA 1573
|| |||||||||||||| ||||||||||| ||||| ||||||||| ||||| |||||
Sbjct 1076 TGGATGAACTCAAAGGTGCTGAGAAAGTGACTGCAGAAAAAGAGAGCATAAAGATTGAGA 1135
Query 1574 ACGAGCGCAAGATTCTCGAGCTGCAGAGGCTGAATGAGGAGATGGACAAAGAGATAGCTC 1633
|||| ||||||||||| |||||||||||||||||||||||| | || |||||||||||||
Sbjct 1136 ACGAACGCAAGATTCTAGAGCTGCAGAGGCTGAATGAGGAGGTAGATAAAGAGATAGCTC 1195
Query 1634 AAAGTAAGTCATGTGCAACAAAGATTGTCCAACAGCTTGATGATGTG-AAGCTTGAGTTT 1692
| ||||||||||||||| | |||||||||||||| ||||| |||||| || ||| |||||
Sbjct 1196 AGAGTAAGTCATGTGCAGCGAAGATTGTCCAACAACTTGAAGATGTGGAA-CTTCAGTTT 1254
Query 1693 -AAGGCAACTGCATCAGCTCCATGGTAA 1719
|| |||||||||| ||||||||||||
Sbjct 1255 CAAA-CAACTGCATCGGCTCCATGGTAA 1281
Score = 204 bits (110), Expect = 3e-51
Identities = 147/164 (90%), Gaps = 5/164 (3%)
Strand=Plus/Plus
Query 600 GTCCTTGAGCTGCAAGAGTAGTAA-G-T-C-AGAACCCAACAAAATCGTTGATTTGCGTA 655
|||||| ||||||||| ||| ||| | | | || || |||||||| |||||||||| |||
Sbjct 135 GTCCTTCAGCTGCAAGGGTAATAAGGCTGCAAG-ACTCAACAAAACCGTTGATTTGTGTA 193
Query 656 GTCTTAGGCCTACACCGCCTTCTATTTCGATTGATGAGTATCAATCGGAGGAATACGTAG 715
||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||
Sbjct 194 GTCTTAGGCCTACACCGCCTTCTATTTCGGTTGAAGAGTATCAATTAAAGGAATACGTAG 253
Query 716 AGGTGTTTCATGGTGGTATGGGATGGCGTCAAGGACGAGTGATG 759
|||||||||||| |||||||||||||||||||||||||||||||
Sbjct 254 AGGTGTTTCATGATGGTATGGGATGGCGTCAAGGACGAGTGATG 297
> AT5G23800.1 | Symbols: ATDUF10, DUF 10 | DOMAIN OF UNKNOWN FUNCTION
724 10 | chr5:8022216-8024689 REVERSE LENGTH=1659
Length=1659
Score = 747 bits (404), Expect = 0.0
Identities = 622/720 (86%), Gaps = 43/720 (6%)
Strand=Plus/Plus
Query 1004 AAGA-AGAGGCTGAAACTCAAAGAAAGACATTCCCCAAGAAGACACTTCCAAGGAATCAG 1062
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 949 AAGACAGAGGTTGAAACTCAAAGAAAGACATTCCCCAAGAAGACACTTCCAAGGAATCAG 1008
Query 1063 AATGGTTCAGGAAACGATTCAACACGAGAGAATGAAAATATCGAAGATGTTAATCGAAAG 1122
||||||||||||||||||||||||| |||||||| ||| || | | |||||||||
Sbjct 1009 AATGGTTCAGGAAACGATTCAACACTAGAGAATG-AAA-AT-----A-G-CAATCGAAAG 1059
Query 1123 AGGAAAAGAGAAGAAAACCTTTGTTCTGATGCTAGTGCTGAGGAAGACAAAGCAAAGGAT 1182
|||||||||||||||||||||||||||| | |||||| ||||||| || | |
Sbjct 1060 AGGAAAAGAGAAGAAAACCTTTGTTCTGGTTCTAGTGTTGAGGAA-AC----C-----A- 1108
Query 1183 ACAAGAATGGTTTTGCCCTTTGAGAAGAAGTTACGAATTTGGAAGACACTAGAATCAATG 1242
|| | || | ||||||||||||||||| | ||||||||| ||| |||||||||
Sbjct 1109 AC----A-----TT-CTCTTTGAGAAGAAGTTACCAGTTTGGAAGATACTTGAATCAATG 1158
Query 1243 GAGGTGTTTAAAACAGTCCCACAAAGTCCTCATTTCAGCCCATTGGTGGAGAGTAGAGAA 1302
||||| ||||| ||| |||||||||||||||||||| |||| |||| |||| |||||||
Sbjct 1159 GAGGTATTTAAGACAATCCCACAAAGTCCTCATTTCCGCCCCTTGGCAGAGATTAGAGAA 1218
Query 1303 GATTCCCGTGAAATGTCT-GCGGTTGGTATGATGCTTACCTTTTC-TGGTTTACTTGATG 1360
|||||||||||||||| | |||||||||||||||||||||||||| | |||||||||| |
Sbjct 1219 GATTCCCGTGAAATGT-TGGCGGTTGGTATGATGCTTACCTTTTCAT-GTTTACTTGA-G 1275
Query 1361 -AAGTCAAAGCTCTGCAACACGATGATCCCATAAGCTCATTCGAT-AGCCTTAATGATTC 1418
|||||||||||||||||||||| || ||| ||||||||| || ||||| | | ||||
Sbjct 1276 CAAGTCAAAGCTCTGCAACACGACGAGGCCAGAAGCTCATT-TATAAGCCTCAGTAATTC 1334
Query 1419 CTTTTCCAAGTTAGAGAAACACGGGCTCAATGTAAAAGTACCTCAGTTACGGCTCAATAA 1478
|||| || ||||||||||||||||| |||||| | ||||| ||||||| ||| |||||||
Sbjct 1335 CTTTGCCGAGTTAGAGAAACACGGGTTCAATGCACAAGTAGCTCAGTTGCGGATCAATAA 1394
Query 1479 GCTGTTGTCTCTCAGAGATA-GACAATCAATGAAAACAGAGGAACTCAAAGGTGCCGAGA 1537
| ||||| |||| |||| || | ||||||| ||||| || ||||||||||| ||| |||
Sbjct 1395 GTTGTTGACTCTTAGAGGTATG-CAATCAAGGAAAATGGATGAACTCAAAGGCGCCAAGA 1453
Query 1538 AAGTGACGGCAGAGAAAGAGAGCGTAAAGGCTGAGAACGAGCGCAAGATTCTCGAGCTGC 1597
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1454 AAGTGACTGCAGAGAAAGAGAGCGTAAAGGTTGAGAACGAGCGCAAGATTCTCGAGCTGC 1513
Query 1598 AGAGGCTGAATGAGGAGATGGACAAAGAGATAGCTCAAAGTAAGTCATGTGCAAC-AAAG 1656
||||||||||||||||||||| ||||||||||||||| |||| |||||||| || ||||
Sbjct 1514 AGAGGCTGAATGAGGAGATGGCCAAAGAGATAGCTCAGAGTATGTCATGTG-AAGGAAAG 1572
Query 1657 ATTGTCCAACAGCTTGATGATGTGAAGCTTGAGTTTAAGGCAACTGCATCAGCTCCATGG 1716
||| |||||||||||||| || |||||||||||||| |||||||||||||||||||||||
Sbjct 1573 ATTCTCCAACAGCTTGATAATATGAAGCTTGAGTTTCAGGCAACTGCATCAGCTCCATGG 1632
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84989522685
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5