BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg894515 Length=444 Score E Sequences producing significant alignments: (Bits) Value AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid induc... 623 4e-178 > AT5G25890.1 | Symbols: IAA28, IAR2 | indole-3-acetic acid inducible 28 | chr5:9033415-9034834 FORWARD LENGTH=873 Length=873 Score = 623 bits (337), Expect = 4e-178 Identities = 381/402 (95%), Gaps = 4/402 (1%) Strand=Plus/Plus Query 45 GGTTGAGGTAGCTCCAGTGGTGGGATGGCCGCCGGTGAGATCATCCCGGCGGAACCTAAC 104 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct 194 GGTTGAGGTAGCTCCAGTGGTGGGATGGCCGCCGGTGAGATCATCCCGGAGAAACCTAAC 253 Query 105 GGCGCAGCTAAAGgaggagatgaagaag-agagagagtgatgaagagaaagagTTGTACG 163 ||| || ||||||||||||||||||||| || ||||||||||||||||| || ||||||| Sbjct 254 GGCACAACTAAAGGAGGAGATGAAGAAGAAG-GAGAGTGATGAAGAGAAGGAATTGTACG 312 Query 164 TTAAGATCAACATGGAAGGAGTTCTC-ATAGGAAGAAAAGTCAACCTTTCAGCTTATAAC 222 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 313 TTAAGATCAACATGGAAGGAGTTC-CAATAGGAAGAAAAGTCAACCTTTCAGCTTATAAC 371 Query 223 AACTACCAACAGCTTTCACATGCCGTTGACCAACTCTTTTCTAAGAAAGATTCGTGGGAT 282 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 372 AACTACCAACAGCTTTCACATGCCGTTGACCAACTCTTCTCTAAGAAAGATTCGTGGGAT 431 Query 283 CTAAACAGACAATACACTTTGGTCTACGAAGACACTGAAGGAGATAAAGTTCTGGTCGGA 342 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 432 CTAAACAGACAATACACTTTGGTCTACGAAGACACTGAAGGAGATAAAGTTCTGGTCGGG 491 Query 343 GATGTTCCTTGGGAGATGTTTGTATCGACCGTGAAGAGGTTACACGTTTTAAAAACCTCC 402 |||||||||||||||||||||||||| || || |||||||| || |||||||| |||||| Sbjct 492 GATGTTCCTTGGGAGATGTTTGTATCTACTGTAAAGAGGTTGCATGTTTTAAAGACCTCC 551 Query 403 AACGCCTTCTCGCTCTCACCTAAAAAACATGGCAAGGAATAG 444 |||||||||| |||||||||| ||||||||||||||||||| Sbjct 552 CACGCCTTCTCACTCTCACCTAGAAAACATGGCAAGGAATAG 593 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 21112454580 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5