BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg895551 Length=2271 Score E Sequences producing significant alignments: (Bits) Value AT4G04850.2 | Symbols: KEA3 | K+ efflux antiporter 3 | chr4:245... 3670 0.0 > AT4G04850.2 | Symbols: KEA3 | K+ efflux antiporter 3 | chr4:2452664-2457675 FORWARD LENGTH=3026 Length=3026 Score = 3670 bits (1987), Expect = 0.0 Identities = 2177/2268 (96%), Gaps = 16/2268 (1%) Strand=Plus/Plus Query 15 ACAACACAATGGTCGATTGAAGCATTGTGTTTTCACGGTGAAATCGAGTGTGCCTGTGTA 74 |||||| | || |||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 579 ACAACATAGTGTTCGATTAAAGCATTGCGTTTTCACGGTGAAATCGAGTGTGCCTGTGTA 638 Query 75 TTCGGAAGGCGTAAACGATGGGATTAAGTTGCATTCTTTTGGGAATTTAGTTAAAACAAG 134 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 639 TTCGGAAGGCGTAAACGATGGGATTAAGTTGCATTCTTTTGGGAATTTAGTT-AAA-AAG 696 Query 135 AAGGTTTTTTCTGGATACTTC-GAGAAGGTTCTATTTCCAAGGTAGATGGTCTGAATTC- 192 |||| ||||||||||||| || || || |||||||||||||| |||||||||||| || Sbjct 697 AAGG-TTTTTCTGGATACCTCTAAG-AGATTCTATTTCCAAGGGAGATGGTCTGAA-TCG 753 Query 193 TCAGGGAGGAGAGTGCAGACTTATGCAGGAGTAGATGTAGCAAGTGCTGTTGATGTAATC 252 ||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||| Sbjct 754 TCAGGGAGGAGAGTGGAGACTTATGCTGGAGTAGATGTAGCGAGTGCTGTTGATGTAATC 813 Query 253 AACGATCTTGGATTCGATACTTTGACCTTCTTGATGGTCACTGTTATTATTGTCCCTGCA 312 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 814 AACGATCTTGGATTCGATACTTTGACCTTCTTGATGGTTACTGTTATTATTGTCCCTGCA 873 Query 313 TTCAGAGTCCTCAAAGCTAGTCCGATACTTGGTTTCTTCTTTGCTGGTGTTGTACTCAAT 372 |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 874 TTCAGAATTCTCAAAGCTAGTCCGATACTTGGTTTCTTCTTTGCTGGTGTTGTACTCAAC 933 Query 373 CAATTTGGTTTGATCAGAAATCTCACAGATGTTAAAGTTCTTTCGGAATGGGGGATTCTT 432 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 934 CAATTTGGTTTGATTAGAAATCTCACAGATGTTAAAGTTCTTTCAGAATGGGGGATTCTT 993 Query 433 TTCCTGCTCTTTGAGATGGGTCTAGAGCTTTCACTTGCTCGTCTGAAAGCTCTTGCAAAA 492 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 994 TTCCTGCTCTTTGAGATGGGTCTCGAGCTTTCACTTGCTCGTCTGAAAGCTCTTGCAAAA 1053 Query 493 TTTGCTTTTGGCATGGGACTAACTCAGGTTTTGTTATGCACGGCTGCATTCACTGCTTTT 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1054 TTTGCTTTTGGCATGGGACTAACTCAGGTTTTGTTATGCACGGCTGCATTCACTGCTTTT 1113 Query 553 GAACTCCCACCAAATGGAGCCATCGGAACAAAAATTCTCGAATTCCTCTTTCATTCAAGG 612 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1114 GAACTCCCACCAAATGGAGCCATCGGAACAAAAATTCTGGAATTCCTCTTTCATTCAAGG 1173 Query 613 CCTGACTTGGTCAACATTAGAAGCATCGATGAGGCTGTTGTCATTGGCGCTGCTCTTTCA 672 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||| Sbjct 1174 CCTGACTTGGTCAACATTAGAAGCATTGATGAGGCCGTTGTCATTGGCGCTGCTCTATCA 1233 Query 673 TTGTCATCTTCAGCTTTTGTTCTCCAGCTTCTTGCAGAGAAAGGAGAGCTCCCTACAAGA 732 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 1234 TTGTCATCTTCAGCTTTTGTTCTACAGCTTCTTGCAGAGAAAGGTGAGCTCCCTACAAGA 1293 Query 733 TTTGGCTCAGCAACCTTGGGAATTCTTCTTCTACAGGATATAGCTGTTGTACCGTTACTA 792 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1294 TTTGGCTCAGCAACCTTGGGAATTCTTCTTCTACAGGATATAGCTGTTGTGCCGTTACTA 1353 Query 793 GTCATTCTTCCGGTGTTGGAAAGCCAGAATATTGGTGGGGAAAGCATATGGCCAATGCTT 852 ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1354 GTCATTCTTCCAGTGTTGGAAAGCCAGGATATTGGTGGGGAAAGCATATGGCCAATGCTT 1413 Query 853 GCAAAAGAAAGTGCAAAGGCTCTTGGTGGGTTGGGCATTCTCTCTCTTGGAGGAAAGTTC 912 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1414 GCAAAAGAAAGTGCAAAGGCTCTTGGTGGGTTGGGCATCCTCTCTCTTGGAGGAAAGTTC 1473 Query 913 TTTCTCCGTAGAATTTTCGAGGTTGTTGCAGAAACCAGAAGCTCGGAAGCTTTTGTGGCC 972 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 1474 TTTCTCCGTAGAATTTTCGAGGTTGTTGCAGAAACAAGAAGCTCAGAAGCTTTTGTGGCC 1533 Query 973 CTTTGCCTTCTCACAGTTGCTGGGACTTCACTTGTGACTCAATGGCTTGGTTTCAGTGAT 1032 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1534 CTTTGCCTTCTCACAGTTGCTGGGACTTCACTTGTGACTCAATGGCTTGGTTTCAGCGAT 1593 Query 1033 ACGCTTGGAGCTTTTCTTGCCGGAGCACTTCTAGCGGAAACAAATTTCCGGACACAAATC 1092 |||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| Sbjct 1594 ACGCTTGGAGCTTTTCTTGCTGGAGCACTTCTAGCAGAAACAAATTTCCGAACACAAATT 1653 Query 1093 GAAGCTGATATAAGGCCATTTAGAGGTTTACTTCTTGGTTTGTTCTTTGTAACCACAGGA 1152 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1654 GAAGCTGATATTAGGCCATTTAGAGGTTTACTTCTCGGTTTGTTCTTTGTAACCACAGGA 1713 Query 1153 ACATCCATTGACATGGAGGTTCTGTTTCGTGAATGGCCTAATGTCCTCTCACTCTTGGGT 1212 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1714 ACTTCCATTGACATGGAGGTTCTGTTTCGAGAATGGCCTAATGTCCTCTCACTCTTGGGT 1773 Query 1213 GGTCTGATTGTGATCAAAACACTTATCATAACCGCAATCGGTCCCCGAGTTGGCCTCACA 1272 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 1774 GGTCTGATTGTGATCAAAACACTGATTATAACCGCAATCGGTCCCCGAGTTGGCCTCACA 1833 Query 1273 ATACAAGAAAGCGTAAGAGTTGGTTTTCTTCTTTCCCAGGGAGGGGAATTTGCATTTGTT 1332 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 1834 ATACAAGAAAGCGTAAGAGTTGGCTTTCTTCTTTCCCAGGGAGGAGAATTTGCATTTGTT 1893 Query 1333 GTGTTCTCTCTAGCCAACAGGCTAGGAGTGCTTCCAAATGAGCTGAACAAACTGCTCATT 1392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1894 GTGTTCTCTCTAGCCAACAGGCTAGGAGTGCTTCCAAATGAGCTGAACAAACTGCTCATT 1953 Query 1393 ATCGTAGTTGTTTTGTCTATGGCATTAACACCTTATCTTAACCAACTTGGAAGAAAAGCC 1452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1954 ATCGTAGTTGTTTTGTCTATGGCATTAACACCTTATCTTAACCAACTTGGAAGAAAAGCC 2013 Query 1453 TCCGATTTTCTTGATGAGAGACTTGATCCCGGAGAGAAAATAGATGAAAATGTGAACTTC 1512 |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct 2014 GCCGATTTTCTTGATGAGAGACTTGATCCCGGAGAGAAAATAGGTGAAGATGTGAACTTC 2073 Query 1513 GACGTTAGTGAATCAATTGTCATCATTGGATTTGGACAAATGGGTCAGGTTCTGGCCAAT 1572 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2074 GATGTTAGTGAATCAATTGTCATCATTGGATTTGGACAAATGGGTCAGGTTCTGGCCAAT 2133 Query 1573 TTTTTGTCAACGCCGTTGGTCTCAGATAGTGATCTTGTGGGATGGCCTTATATTGGCTTT 1632 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2134 TTTTTGTCAACGCCATTGGTCTCAGATAGTGATCTTGTGGGATGGCCTTATATTGGTTTT 2193 Query 1633 GATCTGAATCCTGCTGTAGTGAAGGAATCAAGGAAACTCGGTTTCCCGATATTGTATGGA 1692 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2194 GATCTGAATCCTGCTGTAGTGAAGGAATCAAGGAAACTCGGTTTCCCGATATTGTATGGA 2253 Query 1693 GACGGATCTCGACCATCGGTTTTGCAATCTGCTGGTGTTTCATCTCCTAAAGCTATCATG 1752 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 2254 GACGGATCTCGACCATCGGTTTTGCAATCTGCAGGGGTTTCATCTCCTAAAGCTATCATG 2313 Query 1753 ATAATGTATAAAGGCAAGAAGAGAACTACAGAGGCTGTTCAAAGACTCCGCCTTGCCTTC 1812 |||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||| Sbjct 2314 ATAATGTATAAAGGCAAGAAGAGAACCACTGAGGCTGTTCAAAGACTCCGTCTTGCCTTC 2373 Query 1813 CCGGGGAGTCCAATTTATGCAAGAGCTCAAGATTTACCGCATCTACTTGAACTAAAGAAA 1872 || |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct 2374 CCCGGGAGTCCTATTTACGCAAGAGCTCAAGATTTACCGCATCTCCTTGAACTAAAGAAA 2433 Query 1873 GCAGGAGCAACGGATGCAATTCTTGAAAATGCAGAGACAAGTTTACAGCTCGGCTCGAAG 1932 |||||||| || ||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 2434 GCAGGAGCCACAGATGCAATTCTCGAAAATGCAGAGACAAGTTTACAGCTCGGTTCGAAG 2493 Query 1933 CTGTTGACAGGATTTGGAGTAATGTCTGACGACGTAAGCTTTCTGAGTAAAGTTTTCAGA 1992 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2494 CTGTTGACAGGATTTGGAGTAATGTCTGACGACGTAAGCTTTCTAAGTAAAGTTTTCAGA 2553 Query 1993 GATTCAATGGAGATACAAGCTCAAGAAGAAATCACTGCTAGTGAAACCAATGCTGGTTTG 2052 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 2554 GATTCAATGGAGATACAAGCTCAAGAAGAAATCACAGCTAGTGAAACAAATGCTGGTTTG 2613 Query 2053 AAGCCAATGCAGATGAAAGCTTCTGATATAAACGTAGAGTCTGGTGCA-CA-A----CAA 2106 ||||||||||| |||||||| |||||||||||||||| ||||| |||| || | ||| Sbjct 2614 AAGCCAATGCAAATGAAAGCATCTGATATAAACGTAGTGTCTGCTGCAACACAAAAACAA 2673 Query 2107 GTCCAGCTCATGAAGCCAATGCAAATGAAAGCTTCTGATTCAAACTCAGATTCTGCAGCA 2166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2674 GTCCAGCTCATGAAGCCAATGCAAATGAAAGCTTCTGATTCAAACTCAGATTCTGCAGCA 2733 Query 2167 GAAATTCTTCAAGAAACAGATAGTTTGAGTCAGTCTC---AGATTGATGATTCTTCTGTG 2223 || |||||||||||||||| | ||||||||||| ||| |||||||||||||||||||| Sbjct 2734 GAGATTCTTCAAGAAACAGCTGGTTTGAGTCAGCCTCCTGAGATTGATGATTCTTCTGTG 2793 Query 2224 AATATAGATAATGGATTTGTTGGTAAAGCTGATAAAGCTCAAGAGTAA 2271 |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2794 AATATAGATAATGGATTTGTTGGTAAAGCTGATAAAGCTCAAGATTAA 2841 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 112700223525 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5