BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg896093 Length=552 Score E Sequences producing significant alignments: (Bits) Value AT5G67360.1 | Symbols: ARA12 | Subtilase family protein | chr5:... 544 4e-154 > AT5G67360.1 | Symbols: ARA12 | Subtilase family protein | chr5:26871891-26874579 REVERSE LENGTH=2689 Length=2689 Score = 544 bits (294), Expect = 4e-154 Identities = 331/349 (95%), Gaps = 1/349 (0%) Strand=Plus/Plus Query 1 ACACACGACTCGGACTCCTCTCTTCCT-GGTCTTGATGAACACACCGCAGATCTGTTCCC 59 |||||| ||||| |||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct 429 ACACACCACTCGTACTCCTCTCTTCCTCGGTCTCGACGAACACACCGCAGATCTGTTCCC 488 Query 60 TGAAACCGGCTCTTACAGCGACGTCGTCGTCGGAGTTCTTGATACCGGAGTTTGGCCCGA 119 |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 489 TGAAGCCGGCTCTTACAGCGACGTCGTCGTCGGAGTTCTCGATACCGGAGTTTGGCCCGA 548 Query 120 GAGTAAAAGCTACTCCGACGAAGGATTCGGTCCGATTCCTTCGACTTGGAAAGGCGGATG 179 ||||||||||||||||||||||||||||||||| |||||||| | |||||||||||||| Sbjct 549 GAGTAAAAGCTACTCCGACGAAGGATTCGGTCCTATTCCTTCCTCCTGGAAAGGCGGATG 608 Query 180 GGAGGCCGGAACTAATTTCACCGCTTCTCTCTGTAACCGTAAACTAATCGGAGCAAGATT 239 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 609 CGAGGCCGGAACCAATTTCACCGCTTCTCTCTGTAACCGTAAACTAATCGGAGCAAGATT 668 Query 240 CTTCGCTCGTGGTTACGAATCAACGATGGGACCAATAGACGAATCTAAAGAATCAAGATC 299 |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| Sbjct 669 CTTCGCTCGTGGTTACGAATCAACGATGGGACCAATCGATGAATCTAAAGAATCAAGATC 728 Query 300 TCCTAGAGACGACGACGGTCACAGAACTCACACGTCATCAACCGCCGCT 348 |||||||||||||||||||||| |||||||||| ||||| ||||||||| Sbjct 729 TCCTAGAGACGACGACGGTCACGGAACTCACACCTCATCGACCGCCGCT 777 Score = 202 bits (109), Expect = 3e-51 Identities = 125/133 (94%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 354 TATAATCTGGCATTACGTAACAACTGATCCTAATCCCACCGCTTCGATTTCAATCTTAGG 413 ||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1479 TATAATCCGGCATTACGTGACTACTGATCCTAATCCCACCGCTTCGATTTCAATCTTAGG 1538 Query 414 AACCGTCGTTGGTGTTAAACCATCTCCGGTGGTTGCAGCGTTTAGCTCACGAGGACCGAA 473 ||| ||||| |||||||||||||||||||| || ||||||||||||||||| |||||||| Sbjct 1539 AACAGTCGTCGGTGTTAAACCATCTCCGGTTGTCGCAGCGTTTAGCTCACGTGGACCGAA 1598 Query 474 TTCGATTACACCG 486 ||||||||||||| Sbjct 1599 TTCGATTACACCG 1611 Score = 97.1 bits (52), Expect = 2e-19 Identities = 62/67 (93%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 484 CCGCTTGGACCACTGCTGCAGGACCAACCGGGCTCGCTTCCGATTCTCGCCGCGTGGAGT 543 |||| |||||| |||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct 1658 CCGCGTGGACCGGTGCTGCTGGACCAACCGGACTCGCTTCCGATTCTCGCCGCGTGGAGT 1717 Query 544 TCAATAT 550 ||||||| Sbjct 1718 TCAATAT 1724 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26473395469 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5