BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg896178
Length=684
Score E
Sequences producing significant alignments: (Bits) Value
AT2G02390.3 | Symbols: ATGSTZ1, GST18, GSTZ1 | glutathione S-tr... 1099 0.0
AT2G02380.1 | Symbols: ATGSTZ2, GSTZ2 | glutathione S-transfera... 719 0.0
> AT2G02390.3 | Symbols: ATGSTZ1, GST18, GSTZ1 | glutathione S-transferase
zeta 1 | chr2:628899-631114 FORWARD LENGTH=962
Length=962
Score = 1099 bits (595), Expect = 0.0
Identities = 657/687 (96%), Gaps = 3/687 (0%)
Strand=Plus/Plus
Query 1 ATGGCGAATTCCGGCGCTGAGAAGTTGAAGCTCTACTCTTACTGGAGAAGCTCGTGTGCT 60
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 117 ATGGCGAATTCCGGCGAAGAGAAGTTGAAGCTCTACTCTTACTGGAGAAGCTCGTGTGCT 176
Query 61 CATCGTGTCCGCATCGCCCTCGCTTTAAAAGGTCTTGATTATGAGTATATACCAGTGAAT 120
||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 177 CATCGTGTCCGTATCGCCCTCGCTTTGAAAGGGCTTGATTATGAGTATATACCAGTGAAT 236
Query 121 TTGATCAAGGGTGATCAATTCGATCCAGTTTATCGTTTTGATCTTCAAGATTTCAAGCAG 180
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 237 TTGCTCAAGGGTGATCAATTCGATTCAGTTTATCGTTTTGATCTTCAAGATTTCAAGAAG 296
Query 181 ATCAATCCAATGGGTACTGTACCAGCGCTTGTTGATGGCGATGTCGTGATTAATGATTCT 240
|||||||||||||| ||||||||||| || || ||||| ||||| |||||||||||||||
Sbjct 297 ATCAATCCAATGGGAACTGTACCAGCTCTGGTGGATGGAGATGTTGTGATTAATGATTCT 356
Query 241 TTTGCGATAATAATGTATCTGGATGAGAAGTATCCTGAGCCACCTCTGTTACCTCGTGAC 300
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct 357 TTTGCGATAATAATGTATCTGGATGAGAAGTACCCTGAGCCACCTTTGTTACCTCGTGAC 416
Query 301 ATCCATAAACGGGCTGTGAATTACCAGGCGATGAGTATTGTCTTGTCTGGCATACAACCT 360
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 417 CTCCATAAACGAGCTGTGAATTACCAGGCAATGAGTATTGTCTTGTCTGGCATACAGCCT 476
Query 361 CATCAAAATCTGGCTGTTATTAGGTATATCGAGGAAAAGATAAATGCGGAGGAGAAGACT 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 477 CATCAAAATCTGGCTGTTATTAGGTATATCGAGGAAAAGATAAATGTGGAGGAGAAGACT 536
Query 421 GCTTGGGTTAATAATGCTATCACAAAAGGATTTACAGCTCTCGAGAAACTGTTGGTGAAT 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 GCCTGGGTTAATAATGCTATCACAAAAGGATTTACAGCTCTCGAGAAACTGTTGGTGAAT 596
Query 481 TGCGCTGGGAAACATGCAACTGGTGATGAAATTTACCTGGCTGATCTCTTTCTAGCACCA 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 TGCGCTGGGAAACATGCGACTGGTGATGAAATTTACCTGGCTGATCTCTTTCTAGCACCA 656
Query 541 CAGATCCACGGAGCAATCAACAGATTCCAGATTAACATGGAACCATACCCAACTCTTGCA 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 657 CAGATCCACGGAGCAATCAACAGATTCCAGATTAACATGGAACCGTACCCAACTCTTGCA 716
Query 601 AAATGTTATGAATCATACAACGAACTGCCTTCGTTTCAAAATGCACTCCCGGAAAAGCAG 660
|||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct 717 AAATGTTACGAATCATACAACGAACTGCCTGCGTTTCAAAATGCACTACCGGAAAAGCAG 776
Query 661 CCAGATGCTCCTTC--C-ACCATCTGA 684
|||||||||||||| | |||||||||
Sbjct 777 CCAGATGCTCCTTCTTCCACCATCTGA 803
> AT2G02380.1 | Symbols: ATGSTZ2, GSTZ2 | glutathione S-transferase
(class zeta) 2 | chr2:626842-628676 FORWARD LENGTH=815
Length=815
Score = 719 bits (389), Expect = 0.0
Identities = 579/667 (87%), Gaps = 27/667 (4%)
Strand=Plus/Plus
Query 21 GAAGTTGAAGCTCTACTCTTACTGGAGAAGCTCGTGTGCTCATCGTGTCCGCATCGCCCT 80
||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct 66 GAAGTTGAAGCTCTACTCTTACTGGAGAAGCTCATGTGCTCATCGCGTCCGTATCGCCCT 125
Query 81 CGCTTTAAAAGGTCTTGATTATGAGTATATACCAGTGAATTTGATCAA-GGGTGATCAAT 139
| |||||||||| ||||||||||| |||||||| || |||||| |||| ||| |||||||
Sbjct 126 CACTTTAAAAGGGCTTGATTATGAATATATACCGGTTAATTTGCTCAAAGGG-GATCAAT 184
Query 140 TCGATCCAGTTTATCGTTTTGATCTTCAAGATTTCAAGCAGATCAATCCAATGGGTACTG 199
| | | || | | | ||||||||| |||||||||||||||| ||||
Sbjct 185 -C---C--G---AT--T------C---A-GATTTCAAGAAGATCAATCCAATGGGCACTG 223
Query 200 TACCAGCGCTTGTTGATGGCGATGTCGTGATTAATGATTCTTTTGCGATAATAATGTATC 259
||||||||||||||||||| ||||| ||||||||||| ||||| || ||||||||||| |
Sbjct 224 TACCAGCGCTTGTTGATGGTGATGTTGTGATTAATGACTCTTTCGCAATAATAATGTACC 283
Query 260 TGGATGAGAAGTATCCTGAGCCACCTCTGTTACCTCGTGAC-ATCCATAAACGGGCTGTG 318
||||||| |||||||| |||||||| |||||||| ||||| | |||||||||||| ||
Sbjct 284 TGGATGATAAGTATCCGGAGCCACCGCTGTTACCAAGTGACTA-CCATAAACGGGCGGTA 342
Query 319 AATTACCAGGCGATGAGTATTGTCTTGTCTGGCATACAACCTCATCAAAATCTGGCTGTT 378
||||||||||||| |||||||||| ||||||| ||||| |||||||||||| ||||| ||
Sbjct 343 AATTACCAGGCGACGAGTATTGTCATGTCTGGTATACAGCCTCATCAAAATATGGCTCTT 402
Query 379 ATTAGGTATATCGAGGAAAAGATAAATGCGGAGGAGAAGACTGCTTGGGTTAATAATGCT 438
|||||||| ||||||| ||||||||||| |||||||| ||||||||| ||| |||||||
Sbjct 403 TTTAGGTATCTCGAGGACAAGATAAATGCTGAGGAGAAAACTGCTTGGATTACTAATGCT 462
Query 439 ATCACAAAAGGATTTACAGCTCTCGAGAAACTGTTGGTGAATTGCGCTGGGAAACATGCA 498
|||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| | ||
Sbjct 463 ATCACAAAAGGATTCACAGCTCTCGAGAAACTGTTGGTGAGTTGCGCTGGAAAATACGCG 522
Query 499 ACTGGTGATGAAATTTACCTGGCTGATCTCTTTC-TAGCACCACAGATCCACGGAGCAAT 557
|||||||||||| ||||| |||||||||| |||| |||||||||||||||||| |||| |
Sbjct 523 ACTGGTGATGAAGTTTACTTGGCTGATCT-TTTCCTAGCACCACAGATCCACGCAGCATT 581
Query 558 CAACAGATTCCAGATTAACATGGAACCATACCCAACTCTTGCAAAATGTTATGAATCATA 617
|||||||||||| |||||||||||||||| ||| |||||||||| | ||| || |||||
Sbjct 582 CAACAGATTCCATATTAACATGGAACCATTCCCGACTCTTGCAAGGTTTTACGAGTCATA 641
Query 618 CAACGAACTGCCTTCGTTTCAAAATGCACTCCCGGAAAAGCAGCCAGATGCTCCTTCCAC 677
||||||||||||| | |||||||||||| ||||||| ||||| |||||| ||||||||||
Sbjct 642 CAACGAACTGCCTGCATTTCAAAATGCAGTCCCGGAGAAGCAACCAGATACTCCTTCCAC 701
Query 678 CATCTGA 684
|||||||
Sbjct 702 CATCTGA 708
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 33104302873
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5