BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg896393 Length=213 Score E Sequences producing significant alignments: (Bits) Value AT4G15530.5 | Symbols: PPDK | pyruvate orthophosphate dikinase ... 363 5e-100 > AT4G15530.5 | Symbols: PPDK | pyruvate orthophosphate dikinase | chr4:8864828-8870801 REVERSE LENGTH=2945 Length=2945 Score = 363 bits (196), Expect = 5e-100 Identities = 210/216 (97%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 1 GTTCTTGATCAGCAAGGTGTAGGGCAATTGATCAAGATGGCGACAGAAAAAGGACGAGCA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2730 GTTCTTGATCAGCAAGGTGTAGGGCAATTGATCAAGATGGCGACAGAAAAAGGACGAGCA 2789 Query 61 GCTATGCCTAGCCTCAAGGTTGGGATATGTGGAGAACATGGAGGAGATCCATCGTCTGTG 120 |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2790 GCTAGGCCTAGCCTCAAGGTTGGGATATGTGGAGAACATGGAGGAGATCCATCTTCTGTG 2849 Query 121 GGATTCTTTGCTGAAGCAGGACTTGACTATGTCTCTTGTTCTCCTTTCAGAGTTCCAATT 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2850 GGATTCTTTGCTGAAGCAGGACTTGACTATGTCTCTTGTTCTCCTTTCAGGGTTCCAATT 2909 Query 181 GCAAGGCTTGCAGCTGCTCAAGT--T-GTTGCATGA 213 ||||||||||||||||||||||| | ||||||||| Sbjct 2910 GCAAGGCTTGCAGCTGCTCAAGTAGTTGTTGCATGA 2945 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 9500604561 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5