BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg898000 Length=582 Score E Sequences producing significant alignments: (Bits) Value AT3G50970.1 | Symbols: LTI30, XERO2 | dehydrin family protein |... 647 0.0 > AT3G50970.1 | Symbols: LTI30, XERO2 | dehydrin family protein | chr3:18940777-18941554 FORWARD LENGTH=778 Length=778 Score = 647 bits (350), Expect = 0.0 Identities = 514/591 (87%), Gaps = 20/591 (3%) Strand=Plus/Plus Query 1 ATGGATTCTTACCAGAACCAATCCGGAGTGCCAAAGAAGGGGATGACGGAGAAAATCATG 60 ||| ||||| ||||||| ||| ||||||||| ||||||||| || ||||||||||||||| Sbjct 49 ATGAATTCTCACCAGAATCAAACCGGAGTGCAAAAGAAGGGAATAACGGAGAAAATCATG 108 Query 61 GAGAAGCTACCAGGCCATCATGGTGCTACTAGCACCGGCGGTGTACACCACGAGAAGAAA 120 |||||||||||||| |||||||| |||||| ||| || | ||| ||||||||||||||| Sbjct 109 GAGAAGCTACCAGGTCATCATGGACCTACTAACACTGGTGTTGTTCACCACGAGAAGAAA 168 Query 121 GGTATGACGGAGAAAGTTATGGAGCAGCTACCAGGTAATCAT-G-GATA-TGGTAACACT 177 || |||||||||||||||||||||||||| |||||| ||||| | | || |||| || | Sbjct 169 GGGATGACGGAGAAAGTTATGGAGCAGCTGCCAGGTCATCATGGTGCTACTGGT-AC-C- 225 Query 178 GGCGGTGTTCACCACGAGAAGAAAGGTATGACTGAGAAAGTTATGGAGCAGCTACCAGGT 237 || ||||||||||||||||||||||| ||||| || ||||||||||||||||| |||||| Sbjct 226 GGTGGTGTTCACCACGAGAAGAAAGGAATGACGGAAAAAGTTATGGAGCAGCTGCCAGGT 285 Query 238 CATCATGAAACTCACCAGACTCATGGAACCAACACGGGTTATGG------TAACACTGGC 291 ||||||| | | ||||| | | |||||||||||| |||||| ||||||||| Sbjct 286 CATCATGGATCACACCA-A-AC-TGGAACCAACACAACTTATGGTACTACTAACACTGGT 342 Query 292 GGTGTTCACCACGAGAAGAAAGGTATGACGGAGAAAGTTATGGAGAAACTACCAGGTCAT 351 ||||||||||||||||| ||| || |||| || ||||||||||||||||||||||||||| Sbjct 343 GGTGTTCACCACGAGAAAAAAAGTGTGACCGAAAAAGTTATGGAGAAACTACCAGGTCAT 402 Query 352 CAGGGGTCACACCAAAC-GGGTACTAACACGGGTTATGGTGCTACTAACACTAATGTCGT 410 || |||||||| ||||| ||| |||||||||| |||| | | |||||||||||||||||| Sbjct 403 CATGGGTCACATCAAACTGGG-ACTAACACGGCTTAT-G-G-TACTAACACTAATGTCGT 458 Query 411 TCACCATCAGAAAAAAGGTATAGCTGAAAAAATTAAAGAGCAGTTGCCAGGTCATCAGGG 470 ||||||| |||||||||||||||| ||||| ||||||||||| ||||||||||||| || Sbjct 459 TCACCATGAGAAAAAAGGTATAGCAGAAAAGATTAAAGAGCAACTGCCAGGTCATCATGG 518 Query 471 AGCTCACCAAACTGGAACCACTGTAAATCATGGTAATACTGGCGTTGTTCACCACGAAAA 530 | ||||| ||||||||||||| || | ||||||||||||||||||||||||| ||||| Sbjct 519 AACTCACAAAACTGGAACCACCACAAGTTATGGTAATACTGGCGTTGTTCACCATGAAAA 578 Query 531 GAAGAGTACGATTGATAAGATTAAAGAGAAGCTTCCCGGTGGTCATCACTA 581 || |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 579 TAAAAGTACGATGGATAAGATTAAAGAGAAGCTTCCCGGTGGTCATCACTA 629 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27980419879 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5