BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg898127 Length=714 Score E Sequences producing significant alignments: (Bits) Value AT3G52220.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Kinase ph... 1158 0.0 > AT3G52220.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Kinase phosphorylation domain (InterPro:IPR019315); Has 8882 Blast hits to 4920 proteins in 346 species: Archae - 10; Bacteria - 184; Metazoa - 3955; Fungi - 1221; Plants - 712; Viruses - 24; Other Eukaryotes - 2776 (source: NCBI BLink). | chr3:19369362-19371074 REVERSE LENGTH=1026 Length=1026 Score = 1158 bits (627), Expect = 0.0 Identities = 685/714 (96%), Gaps = 0/714 (0%) Strand=Plus/Plus Query 1 ATGTATCATCCAACGAGGGGAGGTGTTCGCGGTGGTCGAGATCAATTCAGTTGGGATGAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 95 ATGTATCATCCAACGAGGGGAGGTGTTCGCGGTGGTCGAGATCAATTCAGTTGGGATGAA 154 Query 61 GTCAAGGCTGATAAATATAGGGAGAACTATTTGGGTCACAGTATCAAAGCCCCTGTTGGT 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 155 GTCAAGGCTGATAAATATAGGGAGAACTATTTGGGTCACAGTATCAAAGCCCCTGTTGGA 214 Query 121 AGATGGCAAAAAGGTAAAGATCTTCACTGGTATGCTAGAGATAAAAAGCAAAAGGGTTCT 180 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 215 AGATGGCAAAAAGGTAAAGATCTTCATTGGTATGCTAGAGATAAAAAGCAAAAGGGTTCC 274 Query 181 GAGATGGATGCTATGAAAGAGGAGATTCAAAGAGTTAAGGAACAAGAGGAACAGGCCATG 240 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 275 GAGATGGATGCTATGAAAGAAGAGATTCAAAGAGTTAAGGAACAAGAGGAGCAGGCCATG 334 Query 241 AGGGAGGCTCTTGGCTTGGCGCCAAAGTCCTCTACAAGACCACAAGGAAATCGCCTTGAT 300 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 335 AGGGAGGCTCTTGGCTTGGCACCAAAGTCCTCTACAAGGCCACAAGGAAATCGCCTTGAT 394 Query 301 AAGCAAGAGTTTACTGAACTTGTGAAGAGGGGTTCAACAGCAGAGGACTTGGGTGCAGGG 360 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 395 AAGCAAGAGTTTACTGAACTTGTGAAGAGGGGTTCGACAGCAGAGGACTTAGGTGCAGGG 454 Query 361 AACGCTGATGCTGTGTGGGTTCATGGCCTTGGCTATGCAAAAGCACCACGACCTTGGGAA 420 || |||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||| Sbjct 455 AATGCTGATGCTGTGTGGGTTCACGGTCTTGGATATGCTAAAGCACCACGACCTTGGGAA 514 Query 421 GATCCGAGCACCCTTGCATCCTCTCAGAAAGAAGACGCAGAGCCTGCACGTTTGCCAGCA 480 ||||||||||||||||||||||||||||||||||| ||||| | ||||| || |||||| Sbjct 515 GATCCGAGCACCCTTGCATCCTCTCAGAAAGAAGATGCAGATTCAGCACGCTTACCAGCA 574 Query 481 GATACATCAGGGGTCAAAACTGTTGAAGATGGACCGGATGATGTTGAGAGGGACCAAAAG 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 575 GATACATCAGGGGTCAAAACTGTTGAAGATGGACCGGATGATGTTGAGAGGGACCAAAAG 634 Query 541 AAGGATAGGCATGAGGAAAGGAAACCTGCAAAGAGAGAGAAGGAAGAGAGACATGATAGG 600 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 635 AAGGATAGGCGTGAGGAAAGGAAACCTGCAAAGAGAGAGAAGGAAGAAAGACATGATAGG 694 Query 601 CGTGACAAACGTGAAAGGCATGAGAAGCGACGCACTCGAGATTCAGATGATagaaagaag 660 ||||| ||||| |||||||||||||||||| || |||| ||||||||||||||||||||| Sbjct 695 CGTGAAAAACGCGAAAGGCATGAGAAGCGAAGCGCTCGTGATTCAGATGATAGAAAGAAG 754 Query 661 cacaagaaagagaagaaggagaaaaagaGGAGGCATGACTCTGATTCTGATTGA 714 |||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 755 CACAAGAAAGAGAAGAAGGAGAAAAAAAGAAGGCATGACTCTGATTCTGATTGA 808 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34611327283 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5