BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg898513
Length=1392
Score E
Sequences producing significant alignments: (Bits) Value
AT3G55700.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 1447 0.0
AT3G55710.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 1225 0.0
AT3G46658.1 | Symbols: | other RNA | chr3:17188870-17191167 FO... 76.8 5e-13
AT3G46660.1 | Symbols: UGT76E12 | UDP-glucosyl transferase 76E1... 76.8 5e-13
> AT3G55700.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr3:20671115-20673372 FORWARD LENGTH=1564
Length=1564
Score = 1447 bits (783), Expect = 0.0
Identities = 1209/1410 (86%), Gaps = 47/1410 (3%)
Strand=Plus/Plus
Query 1 ATGGATGAGAGAAAAGTGAGGAAAATAATCATGTTCCCT-TTACCGTTTCC-GGGACACT 58
||||| |||||||||| ||||| |||||||||||||||| || || ||||| ||| ||||
Sbjct 88 ATGGAAGAGAGAAAAGGGAGGAGAATAATCATGTTCCCTCTT-CCATTTCCAGGG-CACT 145
Query 59 TCAACCCAATGATCCAACTCGCCAGAATATTCCACCACCGTGGCTTCTCCGTCACGATCC 118
||||||| |||||| | ||||| |||||||||||||||||||||||||||| |||||||
Sbjct 146 TCAACCCCATGATCGAGCTCGCTGGAATATTCCACCACCGTGGCTTCTCCGTGACGATCC 205
Query 119 TCCACACTTCATTCAAC-TCCCCAAATCCTTCTCACTACCCACTCTTCACTTTTCGAACC 177
|||||||||| | |||| ||||| ||||||||| | |||||| ||||||||||||||||
Sbjct 206 TCCACACTTCCTACAACTTCCCC-GATCCTTCTCGCCACCCACACTTCACTTTTCGAACC 264
Query 178 ATCCCTCACAACAACGAAGGAGGAGAAGATCCTCTGACTCAACCAGAAGCTTCTAGTATG 237
||| |||||||||| ||||||| ||||||||||||| |||| ||||| |||| ||||||
Sbjct 265 ATCTCTCACAACAAAGAAGGAGAAGAAGATCCTCTGTCTCAGTCAGAAACTTCGAGTATG 324
Query 238 GATCTTGTCGCCTT-T-ATTCGACTGCTGAGACAAAC-CTATGCGGAGA-CGTTTCGTCA 293
|| || ||| || | |||| | ||||| || ||| ||| || || | |||||||| |
Sbjct 325 GACCTAATCG--TTCTCGTTCGTCGGCTGAAAC-AACGCTACGCCGA-ACCGTTTCGTAA 380
Query 294 GTCTCTGGCGGCGGAAGTAGGTGGAGGAGAGACGATGTGTTGTTTTGTCTCCGATGCTGT 353
|||| ||||||||||||||||||||||||||||| |||||||||| |||||||| ||| |
Sbjct 381 GTCTGTGGCGGCGGAAGTAGGTGGAGGAGAGACGGTGTGTTGTTTGGTCTCCGACGCTAT 440
Query 354 TTGGGCGAGGAACACGGAGGTCGCAGCCGAAAAGGTCGGAGTACGTAGAGTAGTGTTGAT 413
|||| || |||||||||||| | ||| ||| || | ||||| ||||| || |||||||
Sbjct 441 ATGGGGGAAGAACACGGAGGTTGTAGCGGAAGAGATTGGAGTTCGTAGGGTGGTGTTGAG 500
Query 414 TACAAGTGGTGTGGCGTCGTTTTGTGCTTTTGCTGCTTTCCCTCTCCTTAGAGATAAGCA 473
||| |||||| | ||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 501 GACAGGTGGTGCGTCGTCGTTTTGTGCTTTTGCCGCTTTCCCTCTCCTTAGGGATAAGGG 560
Query 474 TTACCTCCCTATACAAGAATCTAGATTAGATGAGCTAGTGACAGAGCTTCCACCTTTGAA 533
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 561 TTACCTCCCTATACAAGATTCTAGATTAGATGAGCCAGTGACAGAGCTTCCACCTTTGAA 620
Query 534 AGTTAAGGATCTTCCGGTAATGGAAACGAATGAGCCGGAGGAACTATACCGGGTAGTTAA 593
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 621 AGTGAAGGATCTTCCGGTAATGGAAACGAATGAGCCGGAGGAACTTTACCGGGTAGTTAA 680
Query 594 CGATATGGTTAAAGGAGCCGAGTCTTCTTCAGGACTCATATGGAACACATTCGAAGATCT 653
||| ||||| |||||||| |||||||||||||| |||||||||||||||| ||||||||
Sbjct 681 CGACATGGTGGAAGGAGCCAAGTCTTCTTCAGGAGTCATATGGAACACATTTGAAGATCT 740
Query 654 TGAAAGACTCTCACTCATGGATTTTAGGAGCAAGTTTCAAGTTCCCATATT-CCCGATTG 712
||||||||| ||||| ||| ||| ||| ||||| || |||||||| || || |||||| |
Sbjct 741 TGAAAGACTATCACTTATGAATTGTAGCAGCAAATTACAAGTTCC-ATTTTTCCCGATCG 799
Query 713 GACCGTTTCACAAACATAGCGAAAATCTT-CTACCGATGATAAAGAACAAAGAAGACCAT 771
|||||||||||||| |||||||| ||| | | ||||| || | ||||||| ||||| |
Sbjct 800 GACCGTTTCACAAATATAGCGAAGATCCTAC-ACCGAAGACAGAGAACAAGGAAGA---T 855
Query 772 GTAACAACCGATTGGCTCAATAAGCAAGATCCCA-AGTCTGTAGTCTATGTAAGTTTTGG 830
| | | ||||||||| | |||||||| |||| |||| || ||||||| ||||| ||
Sbjct 856 --A-C--C-GATTGGCTCGACAAGCAAGA-CCCACAGTCGGTGGTCTATGCGAGTTTCGG 908
Query 831 GAGCCTTGCAAATATAGAGGAGAAGGAGTTTCTCGAGATTGCTTGGGGTCTAAGAAACAG 890
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 909 AAGCCTTGCAGCTATAGAAGAGAAGGAGTTTCTCGAGATTGCTTGGGGTCTAAGAAACAG 968
Query 891 TGAACGACCCTTTTTGTGGGTGGTTAGGCCAGGGT-TAGTCCGAAGGACTGAGTGGCTGG 949
||||||||| |||||||||||||||||||| |||| | ||| | |||| |||||||| |
Sbjct 969 TGAACGACCGTTTTTGTGGGTGGTTAGGCCGGGGTCT-GTCAGGGGGACCGAGTGGCTCG 1027
Query 950 AAG-CATTGCCT--AGTGGATTTGTGGAAAACATTGGCCAGAAGGGAAAATTTGTAAAAT 1006
| | |||||||| || || ||| ||||||||||||| | ||||||||| | || ||||
Sbjct 1028 A-GTCATTGCCTTTAG-GG-TTTATGGAAAACATTGGAGATAAGGGAAAAATCGTGAAAT 1084
Query 1007 GGGTGAATCAATTAGAGGTATTGGCGCATTCTGCTGTTGGGGCATTTTGGACGCATTGTG 1066
||| |||||| |||||||||||||||||| |||| |||| || |||||||| |||||||
Sbjct 1085 GGGCGAATCAGTTAGAGGTATTGGCGCATCCTGCCATTGGAGCGTTTTGGACACATTGTG 1144
Query 1067 GATGGAACTCGACACTAGAAAGCATATGTGAAGGTGTTCCAATGATATGTACACCGTGTT 1126
||||||||||||||||||| |||||||||||||||||||| ||||||||||| | ||||
Sbjct 1145 GATGGAACTCGACACTAGAGAGCATATGTGAAGGTGTTCCTATGATATGTACGTCATGTT 1204
Query 1127 TCACGGACCAGTTTGTGAATGCGAGGTACATTGTTGATGTATGGCGAATCGGGAT-TGAG 1185
||||||||||| |||||| ||||| ||||| ||||||||||||||| ||||||| | |
Sbjct 1205 TCACGGACCAGCATGTGAACGCGAGATACATCGTTGATGTATGGCGAGTCGGGATGTT-G 1263
Query 1186 TTAGAGAGA-GCTACGATGGATAGGAAGGAGATTGAGAAGGTGTTACGAAGTGTAATGAT 1244
||||||||| | || |||||| | |||||||||||| |||||| || |||||||||||||
Sbjct 1264 TTAGAGAGAAG-TAAGATGGAAAAGAAGGAGATTGAAAAGGTGCTAAGAAGTGTAATGAT 1322
Query 1245 AAAGGAAGG-AGATTGAATT-AGAGAGATGTGTTTGAAATTGAAAGAGAGAGCTAATGTT 1302
|| |||| |||| || || || || | | ||||||| ||||||||||||||| || ||
Sbjct 1323 GGAG-AAGGGAGATGGA-TTGAGGGAAAGGAGTTTGAAGTTGAAAGAGAGAGCTGATTTT 1380
Query 1303 TGCTTAAGTATAGATGGGTCTTCTTCCATA-TATCTAGACACACTTGTGAATCATGTCCT 1361
|||||||||| ||||||||||||||||| | ||| |||||| |||||||| |||||||||
Sbjct 1381 TGCTTAAGTAAAGATGGGTCTTCTTCCA-AGTATTTAGACAAACTTGTGAGTCATGTCCT 1439
Query 1362 GTCTTTTGATCCTTATGATGTTGCAAGTTA 1391
|||||||||| |||||| | ||||||||||
Sbjct 1440 GTCTTTTGATTCTTATGCTTTTGCAAGTTA 1469
> AT3G55710.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr3:20673847-20675946 FORWARD LENGTH=1530
Length=1530
Score = 1225 bits (663), Expect = 0.0
Identities = 1178/1421 (83%), Gaps = 57/1421 (4%)
Strand=Plus/Plus
Query 1 ATGGATGAGAGAAAAGTGAGGAAAATAATCATGTTCCCTTTACCGTTTCCGGGACACTTC 60
||||| ||||||||||||| || ||| |||||||||||| |||||||| | |||||||||
Sbjct 1 ATGGAAGAGAGAAAAGTGAAGAGAATTATCATGTTCCCTCTACCGTTTACAGGACACTTC 60
Query 61 AACCCAATGATCCAACTCGCCAGAATATTCCACCACCGTGGCTTCTCCGTCACGATCCTC 120
||||| |||||| | || || ||||||||||| |||||||||||||||||||||| |||
Sbjct 61 AACCCTATGATCGAGCTTGCTGGAATATTCCACAACCGTGGCTTCTCCGTCACGATACTC 120
Query 121 CACACTTCATTCAACTCCCCAAATCCTTCTCACTACCCACTCTTCACTTTTCGAACCATC 180
|||||||| ||||||| ||| ||||||||| | | |||| || ||||||||||| |||
Sbjct 121 CACACTTCTTTCAACTTCCCGGATCCTTCTCGCCATCCACAGTTTACTTTTCGAACTATC 180
Query 181 CCTCACAACAACGAAGGAGGAGAAGATCCTCTGACTCAACCAGAAGCTTC-T--AGTATG 237
||||||| |||||||||| |||||| ||||| ||||| ||||| |||| | ||| |
Sbjct 181 ACTCACAAAAACGAAGGAGAAGAAGACCCTCTCTCTCAATCAGAAACTTCTTCGGGTAAG 240
Query 238 GATCTTGTCG-CCTTTATTCGACTGCTGAGACAA-ACCTATGCGGAGACGTTTCGTCAGT 295
|| || |||| || ||||| | ||||||| |||| | ||| | ||| | |||| |
Sbjct 241 GACCTCGTCGTCC-TTATTAGTCTGCTGAAACAATA-CTACACCGAG-C----CGTC--T 291
Query 296 CTCTGGCGGCGGAAGTAGGTGGAGGAGAGACGATGTGTTGTTTTGTCTCCGATGCTGTTT 355
|| | || | ||||||||| | ||||| |||| |||||||||| |||||||| ||| | |
Sbjct 292 CT-T-GCAGAGGAAGTAGGCGAAGGAGGGACGGTGTGTTGTTTGGTCTCCGACGCTCTAT 349
Query 356 GGGCGAGGAACACGGAGGTCGCAGCCGAAA-AGGTCGGAGTACGTAGAGTAGTGTTGATT 414
||| ||||||||||||| | | || ||||| || | ||||| ||| | | ||| |||
Sbjct 350 GGGGGAGGAACACGGAGATTGTAG-CGAAAGAGATTGGAGTGTGTACAATGGTGATGAGG 408
Query 415 ACAAGTGGTGTGGCGTCGTTTTGTGCTTTTGCTGCTTTCCCTCTCCTTAGAGATAAGCAT 474
|| ||||||| ||| |||||||||||| | | |||||||||||||||| ||||||| |
Sbjct 409 ACTAGTGGTGCGGCAACGTTTTGTGCTTATACAGCTTTCCCTCTCCTTATAGATAAGGGT 468
Query 475 TACCTCCCTATACAAGAATCTAGATTAGATGAGCTAGTGACAGAGCTTCCACCTTTGAAA 534
||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 469 TACCTTCCTATACAAGGTTCTAGATTAGATGAGCTAGTGACAGAGCTTCCACCTTTGAAA 528
Query 535 GTTAAGGATCTTCCGGTAATGGAAACGAATGAGCCGGAGGAACTATACCGGGTAGTTAAC 594
|| ||||||||||| ||||| ||||||| ||||| |||| |||| |||| || |||||
Sbjct 529 GTGAAGGATCTTCCTGTAATAAAAACGAAAGAGCCTGAGGGACTAAACCGAATACTTAAC 588
Query 595 GATATGGTTAAAGGAGCCGAGTCT-TCTTCAGGACTCATATGGAACACATTCGAAGATCT 653
|| ||||| |||||||| ||| | ||||| ||| || ||||||||||||| ||||||||
Sbjct 589 GACATGGTGGAAGGAGCCAAGT-TATCTTCCGGAGTCGTATGGAACACATTTGAAGATCT 647
Query 654 TGAAAGAC-TCTCACTCATGGATTTTAGGAGCAAGTTTCAAGTTCCCATATTCCCGATTG 712
|||||||| | ||||||||||||| | | |||||||| |||||||| | ||||| || |
Sbjct 648 TGAAAGACAT-TCACTCATGGATTGTCGCAGCAAGTTACAAGTTCCGTTGTTCCCAATCG 706
Query 713 GACCGTTTCACAAACATAGCGAA--AATCTTCTACCGATGATAAAGAACAA--AGAA-GA 767
|||||||||||||||||| ||| |||||| ||||| | ||||||||| | || ||
Sbjct 707 GACCGTTTCACAAACATA--GAACCGATCTTCCACCGAAGCCAAAGAACAAGGACAAGGA 764
Query 768 CCATG-T---A-A-CAACCGATTGGCTCAATAAGCAAGATCC-CAAGTCTGTAGTCTATG 820
| ||| | | | |||||||||||| || ||||||| ||| | ||||||| |||||||
Sbjct 765 CGATGATGAAATATTAACCGATTGGCTTAACAAGCAAGCTCCGC-AGTCTGTGGTCTATG 823
Query 821 TAAGTTTTGGGAGCCTTGCAAATATAGAGGAGAAGGAGTTTCTCGAGATTGCTTGGGGTC 880
| |||||||| ||||||||| |||||| ||||| |||||| |||| |||||||||||||
Sbjct 824 TGAGTTTTGGAAGCCTTGCAGCTATAGAAGAGAATGAGTTTTTCGAAATTGCTTGGGGTC 883
Query 881 TAAGAAACAGTGAACGACCCTTTTTGTGGGTGGTTAGGCCAGGGTTAGTCCGAAGG-ACT 939
|||||||||| |||| ||| || ||||||||||||||||| ||| | ||||| || ||
Sbjct 884 TAAGAAACAGCGAACTACCATTCTTGTGGGTGGTTAGGCCCGGGATGGTCCG-GGGAACC 942
Query 940 GAGTGGCTGGAAG-CATTGCCTAGTGGATTTGTGGAAAACATTGGCCAGAAGGGAAAATT 998
|||||||| | || |||||||| |||| ||| ||||||| ||||| || |||||||| |
Sbjct 943 GAGTGGCTTG-AGTCATTGCCTTGTGGGTTTTTGGAAAATATTGGTCATCAGGGAAAAAT 1001
Query 999 TGTAAAATGGGTGAATCAATTAGAGGTATTGGCGCATTCTGCTGTTGGGGCATTTTGGAC 1058
||| ||||||||||||||| ||||| |||||| ||| |||| ||||| || ||||||||
Sbjct 1002 TGTGAAATGGGTGAATCAACTAGAGACATTGGCCCATCCTGCGGTTGGAGCGTTTTGGAC 1061
Query 1059 GCATTGTGGATGGAACTCGACACTAGAAAGCATATGTGAAGGTGTTCCAATGATATGTAC 1118
||| |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||
Sbjct 1062 GCACTGTGGATGGAACTCAACAATAGAGAGCATATGTGAAGGTGTTCCAATGATATGTAC 1121
Query 1119 ACCGTGTTTCACGGACCAGTTTGTGAATGCGAGGTACATTGTTGATGTATGGCGAATCGG 1178
||||||||| |||||||| |||||| ||||||||||| ||||||||||||||| ||||
Sbjct 1122 GCCGTGTTTCTCGGACCAGCATGTGAACGCGAGGTACATCGTTGATGTATGGCGAGTCGG 1181
Query 1179 GATTGA-GTTAGAGAGA-GCTACGATGGATAGGAAGGAGATTGAGAAGGT-GTTACGAAG 1235
||| || |||||||||| | || |||||| |||| ||||||||||||||| || || |||
Sbjct 1182 GAT-GATGTTAGAGAGATG-TAAGATGGAAAGGACGGAGATTGAGAAGGTAGTAAC-AAG 1238
Query 1236 TGTAATGATAAAGGAA-GGAGATTGAATT-AGAGAGATGTGTTTGAAATTGAAAGAGAGA 1293
||||||||| || || |||| | || || | ||||||||||||| | |||||||||| |
Sbjct 1239 TGTAATGATGGAG-AATGGAGCTGGA-TTGACAGAGATGTGTTTGGAGTTGAAAGAGAAA 1296
Query 1294 GCTAATGTTTGCTTAAGT-ATAGATGGGTCTTCTTCCATA-TATCTAGACACACTTGTGA 1351
|||||||||||||||||| | ||||||||||||||||| | |||||||||| |||||| |
Sbjct 1297 GCTAATGTTTGCTTAAGTGA-AGATGGGTCTTCTTCCA-AGTATCTAGACAAACTTGTCA 1354
Query 1352 ATCATGTCCTGTCTTTTGAT-CCTTATGATGTTGCAAGTTA 1391
||||||||||||||||||| ||| | | ||||||||||
Sbjct 1355 GTCATGTCCTGTCTTTTGATTCCTCG-GCTTTTGCAAGTTA 1394
> AT3G46658.1 | Symbols: | other RNA | chr3:17188870-17191167
FORWARD LENGTH=2026
Length=2026
Score = 76.8 bits (41), Expect = 5e-13
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 1051 TTTTGGACG-CATTGTGGATGGAACTCGACACTAGAAAGCATATGTGAAGGTGTTCCAAT 1109
||||||| | |||||||||||||||||||||||||||||||| | |||| ||||||||
Sbjct 585 TTTTGGA-GCCATTGTGGATGGAACTCGACACTAGAAAGCATCGGCCAAGGAGTTCCAAT 527
Query 1110 GAT 1112
|||
Sbjct 526 GAT 524
> AT3G46660.1 | Symbols: UGT76E12 | UDP-glucosyl transferase 76E12
| chr3:17189264-17191167 REVERSE LENGTH=1824
Length=1824
Score = 76.8 bits (41), Expect = 5e-13
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Plus
Query 1051 TTTTGGACG-CATTGTGGATGGAACTCGACACTAGAAAGCATATGTGAAGGTGTTCCAAT 1109
||||||| | |||||||||||||||||||||||||||||||| | |||| ||||||||
Sbjct 1362 TTTTGGA-GCCATTGTGGATGGAACTCGACACTAGAAAGCATCGGCCAAGGAGTTCCAAT 1420
Query 1110 GAT 1112
|||
Sbjct 1421 GAT 1423
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 68573944470
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5