BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg899931
Length=2919
Score E
Sequences producing significant alignments: (Bits) Value
AT2G25140.1 | Symbols: HSP98.7, CLPB-M, CLPB4 | casein lytic pr... 4300 0.0
AT3G32375.1 | Symbols: | pseudogene, putative heat shock prote... 684 0.0
AT3G31906.1 | Symbols: | pseudogene, ATP-dependent CLPB protei... 625 9e-178
AT2G25030.1 | Symbols: | pseudogene, HSP100/ClpB, putative, si... 590 3e-167
> AT2G25140.1 | Symbols: HSP98.7, CLPB-M, CLPB4 | casein lytic
proteinase B4 | chr2:10697703-10702152 REVERSE LENGTH=3223
Length=3223
Score = 4300 bits (2328), Expect = 0.0
Identities = 2742/2935 (93%), Gaps = 56/2935 (2%)
Strand=Plus/Plus
Query 1 ATGGCGTCT-AGGAGATTATCCAAGTCTGTTTCCTCAGCCATCAAGGCTCAATATActct 59
|||||| || ||||||||||| ||||||||||| ||||||||||| |||||||| |||||
Sbjct 155 ATGGCG-CTAAGGAGATTATCAAAGTCTGTTTCGTCAGCCATCAAAGCTCAATACACTCT 213
Query 60 ctcgaaaccac-ctcttctcctccgttctcgtcctctctctgctt-ctcctcactacacc 117
||||| ||| | ||| ||||||||||||||| |||||||| ||| || ||| || ||
Sbjct 214 CTCGAGACC-CTCTCCTCTCCTCCGTTCTCG--CTCTCTCT-CTTCCT-CTC-CT-CA-- 264
Query 118 tctcccaattcctctATTTTCCGG-C--CAAATTCATTCATCAGAATCACCGGAAACAAC 174
|| | | |||||||| |||| | |||||||||||||| ||| | || |||
Sbjct 265 -CT-AC-A--CCTCTATTGGCCGGCCAACAAATTCATTCATCGGAA--A----AATCAAT 313
Query 175 AACTCTTCGATCACTCA---AACGACTACTCAAAGCCAACTCTTCCCTCTTTCTCTTCAA 231
|||||||| |||||||| || |||||||| | |||||||| | | ||| |
Sbjct 314 AACTCTTCTATCACTCATGCGACTACTACTCATGGTCAACTCTT--C-C---CTC-T--- 363
Query 232 TTCCCTTCTCCGCGACGCTTCTCCACCACCACAGCTCAGATTAATCAAAATGAGTTTACG 291
|| |||||||||||||||| | || |||||||||||| ||||||||||||||||||||
Sbjct 364 TT--CTTCTCCGCGACGCTTTTGTACTACCACAGCTCAGGTTAATCAAAATGAGTTTACG 421
Query 292 GAGATGGCATGGGAAGGGCTTATCAATGCCTATGATGCGGCTCGTGAATCGAACCAACAA 351
|||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||
Sbjct 422 GAGATGGCATGGGAAGGGCTTATCAACGCCTTTGACGCGGCTCGTGAATCGAAACAACAG 481
Query 352 ATTGTTGAATCTGAACATTTGATGAAAGCTCTTCTTGAGCAAAAAGATGGTATGGCTAG- 410
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 482 ATTGTGGAATCTGAACATTTGATGAAAGCTCTTCTTGAGCAAAAAGATGGTATGGCTAGA 541
Query 411 AAGAGTATTCGCCAAAGCCGGAATCGACAATTCCTCTGTT-TTGCAAGCTACTGACTTGT 469
|||| | ||| | ||||| ||||| ||||||||||||||| || |||||||| |||||||
Sbjct 542 AAGA-TTTTCACTAAAGCTGGAATTGACAATTCCTCTGTTCTT-CAAGCTACAGACTTGT 599
Query 470 TCATATCTAAACAACCAACGGTTAGTGATACAGGTGGTCAGAGACTAGGGTCATCTCTTA 529
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 600 TCATATCTAAACAACCAACGGTTAGTGATGCAAGTGGTCAGAGACTAGGGTCATCTCTTA 659
Query 530 GTGTTATATTAGAAAATGCAAAGAGGCATAAGAAAGATATGTTGGATAGTTATGTATCTG 589
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 660 GTGTTATATTAGAAAATGCAAAGAGGCATAAGAAAGATATGTTGGATAGTTATGTATCCG 719
Query 590 TGGAACATCTTCTT-TTGGCGTT-TTATTCTGATGCAAGGTTTGGTCAAGAATTTTTCAA 647
|||| || ||| || ||||| || |||||| ||| |||||||||| ||||| |||||||
Sbjct 720 TGGAGCA-CTTTTTGTTGGC-TTATTATTCAGATACAAGGTTTGGACAAGAGTTTTTCAG 777
Query 648 GAATATGAAACTTGATATGCAAGTGCTTAAGGATGCTATAAAAGATGTACGCGGTAG-TC 706
| | |||||||||||||| |||||||| ||||||||||| ||||||||||||||| | ||
Sbjct 778 GGACATGAAACTTGATATTCAAGTGCTAAAGGATGCTATTAAAGATGTACGCGGT-GATC 836
Query 707 AACGCGTAACTGATCAAAATCCTGAAAGCAAATATGAAGCACTTGAAAAGTATGGAAATG 766
|||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct 837 AACGAGTAACTGATCGGAATCCTGAAAGCAAATATCAAGCACTTGAAAAGTATGGAAATG 896
Query 767 ATTTAACTGAGATGGCTAGACGAGGGAAACTTGATCCGGTTATTGGGCGGGATGATGAAA 826
|||||||||||||||||||||||||||| || ||||| || |||||||||||||||||||
Sbjct 897 ATTTAACTGAGATGGCTAGACGAGGGAAGCTGGATCCTGTCATTGGGCGGGATGATGAAA 956
Query 827 TTCGGCGTTGCATTCAGATATTATGTAGAAGAACAAAAAACAATCCGGTTATTATTGGTG 886
|| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 957 TTAGGCGTTGCATCCAGATATTATGTAGGAGAACAAAAAACAATCCGGTTATTATTGGTG 1016
Query 887 AGCCTGGTGTAGGGAAAACTGCAATTGCAGAGGGGTTGGCTCAACGAATTGTGCGAGGAG 946
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 AACCTGGTGTAGGGAAAACTGCAATTGCAGAGGGGTTGGCTCAACGAATTGTGCGAGGAG 1076
Query 947 ATGTCCCTGAACCTCTCATGAATCGAAAGTTGATATCTCTCGACATGGGTTCACTTCTTG 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 ATGTCCCTGAACCTCTCATGAATCGAAAGTTGATATCTCTCGACATGGGTTCACTTCTTG 1136
Query 1007 CTGGTGCCAAATATCGAGGAGATTTTGAGGAAAGATTGAAAGCAGTATTGAAGGAAGTAA 1066
|||||||||||| |||||||||||||||||| || |||||||||||| |||||||||||
Sbjct 1137 CTGGTGCCAAATTTCGAGGAGATTTTGAGGAGAGGTTGAAAGCAGTAATGAAGGAAGTAT 1196
Query 1067 CTGCTTCCAATGGGCAAACAATCTTGTTCATTGATGAGATCCACACTGTTGTTGGTGCAG 1126
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1197 CTGCTTCCAATGGGCAAACAATCTTGTTTATTGATGAGATCCACACTGTTGTTGGTGCAG 1256
Query 1127 GAGCTATGGGGGGAGCAATGGATGCGAGCAACCTCTTGAAACCAATGCTTGGACGAGGTG 1186
||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1257 GAGCTATGGATGGAGCAATGGATGCAAGCAACCTCTTGAAACCAATGCTTGGACGAGGTG 1316
Query 1187 AACTGAGATGCATTGGTGCAACTACACTGACCGAATACCGAAAATATATAGAGAAAGATC 1246
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1317 AACTGAGATGCATTGGTGCAACTACACTGACCGAATACCGCAAATATATAGAGAAAGACC 1376
Query 1247 CAGCTCTAGAGCGTAGGTTTCAACAAGTGTTATGTACTCAGCCCTCTGTTGAAGATACTA 1306
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 1377 CAGCTCTAGAGCGTAGGTTTCAACAAGTGTTATGTGTTCAGCCCTCTGTTGAAGATACAA 1436
Query 1307 TCTCGATTCTTCGTGGGTTAAGAGAGCGATACGAGTTACACCATGGTGTTACTATATCAG 1366
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1437 TCTCGATTCTTCGTGGGTTAAGAGAGCGGTACGAGTTACACCATGGCGTTACTATATCAG 1496
Query 1367 ATAGTTCCCTTGTTTCAGCAGCTGTTCTGGCAGACCGATACATCACTGAACGCTTTCTGC 1426
||||| |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||
Sbjct 1497 ATAGTGCCCTTGTTTCAGCAGCAGTTCTTGCAGACCGCTACATCACCGAACGCTTTCTGC 1556
Query 1427 CAGACAAAGCTATTGATCTTGTTGACGAAGCTGCTGCAAAGCTGAAGATGGAGATCACTT 1486
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1557 CAGACAAAGCTATTGATCTTGTTGACGAAGCTGGTGCAAAGCTGAAGATGGAGATCACTT 1616
Query 1487 CTAAACCAACTGAACTAGATGAAATAGATAGAGCTGTGATCAAATTAGAGATGGAAAAGC 1546
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 1617 CTAAACCAACTGAACTAGATGGAATAGATAGAGCTGTGATCAAATTGGAGATGGAAAAGC 1676
Query 1547 TTTCTCTTAAAAATGATACTGATAAAGCTTCTAAAGAACGGCTACAAAAGATTGAGAATG 1606
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1677 TTTCTCTTAAAAATGATACTGATAAAGCATCTAAAGAACGGCTACAGAAGATTGAGAATG 1736
Query 1607 ATCTGTCCACGCTCAAACATAAACAGAAAGAACTCAGTGACCAATGGGAAAAAGAAAAGT 1666
||||||||||||||||||| |||||||||||||||| || ||||||||| ||||||||||
Sbjct 1737 ATCTGTCCACGCTCAAACAGAAACAGAAAGAACTCAATGTCCAATGGGAGAAAGAAAAGT 1796
Query 1667 CGCTCATGACCAAAATACGTTCATTTAAGGAAGAGATTGATCGAGTGAACCTCGAAATTG 1726
|||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 1797 CGCTCATGACAAAAATACGTTCGTTTAAGGAAGAGATTGATCGAGTTAACCTCGAAATTG 1856
Query 1727 AATCTGCTGAACGTGAATATGATCTAAACCGAGCTGCTGAGCTTAAGTATGGAACACTTA 1786
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1857 AATCTGCTGAACGTGAATATGATCTAAACCGAGCTGCTGAGCTGAAGTATGGAACACTTT 1916
Query 1787 TGTCCCTCCAACGCCAATTAGAAGAAGCTGAGAAGAATCTCACGAATTTCCGACAGTCTG 1846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1917 TGTCCCTCCAACGCCAATTAGAAGAAGCTGAGAAGAATCTCACGAATTTCCGACAGTTTG 1976
Query 1847 GACAGTCACTACTCCGAGAAGAGGTTACCGATCTTGACATAGCAGAAATAGTAAGCAAGT 1906
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1977 GACAGTCACTACTCCGAGAAGTGGTTACCGATCTTGACATAGCAGAAATAGTAAGCAAGT 2036
Query 1907 GGACTGGTATTCCACTATCTAATCTTCAGCAATCAGAGAGAGAAAAGCTAGTCATGTTGG 1966
||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||
Sbjct 2037 GGACTGGTATTCCACTATCTAATCTTCAGCAATCAGAGAGAGAGAAGTTAGTGATGTTGG 2096
Query 1967 AACAAGTTCTCCACCATAGAGTTGTTGGTCAAGACATGGCTGTGAAATCAGTAGCAGATG 2026
|| |||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 2097 AAGAAGTGCTCCACCATAGAGTTATTGGTCAAGACATGGCTGTAAAATCAGTAGCAGATG 2156
Query 2027 CTATCCGACGTTCAAGGGCTGGCCTTTCTGATCCTAACCGCCCAATAGCTAGTTTCATGT 2086
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2157 CTATCCGACGTTCAAGGGCTGGTCTTTCTGATCCTAACCGCCCAATAGCTAGTTTCATGT 2216
Query 2087 TCATGGGTCCAACAGGTGTTGGTAAGACCGAGCTTGCCAAGGCTCTAGCGGGATACCTTT 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2217 TCATGGGTCCAACAGGTGTTGGTAAGACCGAGCTTGCCAAGGCTCTAGCGGGATACCTTT 2276
Query 2147 TTAACACTGAAAATGCAATAGTGAGGATCGATATGAGTGAGTATATGGAAAAATTCTCAG 2206
|||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||
Sbjct 2277 TTAACACTGAAAATGCAATAGTGAGGGTCGATATGAGTGAGTACATGGAAAAACACTCAG 2336
Query 2207 TCTCGCGGCTTGTTGGTGCACCACCGGGCTATGTTGGTTATGAAGAAGGTGGGCAATTAA 2266
|||| |||||||||||||||||||| |||||||| |||||||||||||||||||| ||||
Sbjct 2337 TCTCACGGCTTGTTGGTGCACCACCTGGCTATGTCGGTTATGAAGAAGGTGGGCAGTTAA 2396
Query 2267 CTGAAGTTGTTCGGAGGAGACCTTACTCGGTGGTTCTGTTTGATGAGATCGAGAAAGCCC 2326
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2397 CTGAAGTTGTTCGCAGGAGACCTTACTCGGTGGTTCTGTTTGATGAGATCGAGAAAGCCC 2456
Query 2327 ACCCTGATGTCTTTAATATCTTGCTACAACTGCTAGACGATGGAAGAATAACTGATTCTC 2386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2457 ACCCTGATGTCTTTAATATCTTGCTACAACTGCTAGACGATGGAAGAATAACTGATTCTC 2516
Query 2387 AAGGGAGGACAGTAAGTTTCAAAAACTGTGTTGTAATTATGACGTCAAATATAGGATCTC 2446
|||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2517 AAGGAAGGACCGTAAGTTTCAAAAACTGTGTTGTAATTATGACGTCGAATATAGGATCTC 2576
Query 2447 ACCACATACTTGAGACCCTCCGCAACAATGAAGACAGCAAAGAAGCAGTTTATGAGATAA 2506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2577 ACCACATACTTGAGACCCTCCGCAACAATGAAGACAGCAAAGAAGCAGTTTATGAGATAA 2636
Query 2507 TGAAGCGACAAGTTGTGGAGTTAGCAAGACAAAATTTTAGGCCTGAGTTCATGAACAGAA 2566
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2637 TGAAGCGGCAAGTTGTGGAGTTAGCAAGACAAAATTTCAGGCCTGAGTTCATGAACAGAA 2696
Query 2567 TTGACGAATACATAGTTTTCCAGCCGCTGGATTCTAAAGAAATCTCCAAAATCGTAGAGT 2626
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2697 TTGACGAGTACATAGTTTTCCAGCCGCTGGATTCTAACGAAATCTCCAAAATCGTAGAGT 2756
Query 2627 TACAGATGAGACGGGTGAAGAATAGGTTGGAACAGAAGAAAATCAATCTTCAGTATACAA 2686
||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |
Sbjct 2757 TACAGATGAGACGGGTGAAGAATAGCTTGGAACAGAAGAAAATCAAACTTCAGTATACCA 2816
Query 2687 AAGAGGCAGTGGATCTC-TTGGCTCAGCTTGGTTTTGACCCCAACTACGGGGCGAGACCT 2745
||||||||||||||||| ||| |||||||||| |||||||| ||||||||||| || ||
Sbjct 2817 AAGAGGCAGTGGATCTCCTTG-CTCAGCTTGGCTTTGACCCTAACTACGGGGCAAGGCCG 2875
Query 2746 GTGAAGAGAGTGATTCAACAGATGGTGGAGAATGAGATCGCTGTCGG-AGTTTTGAAAGG 2804
|||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 2876 GTGAAGCGAGTGATTCAACAGATGGTGGAGAATGAGATCGCTGTCGGGA-TTTTGAAAGG 2934
Query 2805 AGATTTCGCAGAAGAAGATACCGTTCTTGTCGATGTTGACCTCTTGGCTAGTGACAACAA 2864
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2935 AGATTTTGCAGAAGAAGATACCGTTCTTGTCGATGTTGACCACTTGGCTAGTGACAACAA 2994
Query 2865 GTTGGTTATCAAGAAGCTCGAGAGTAATGCTTCACCTGAAGAAATGGCCGCTTAA 2919
||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 2995 ATTGGTTATCAAGAAGCTTGAGAGTAATGCTTCAGCTGAAGAAATGGCCGCTTAA 3049
> AT3G32375.1 | Symbols: | pseudogene, putative heat shock protein,
similar to heat shock protein GI:3360502 from (Plectonema
boryanum); blastp match of 80% identity and 2.6e-110 P-value
to GP|9651530|gb|AAF91178.1|AF203700_1|AF203700 ClpB {Phaseolus
lunatus} | chr3:13304501-13306236 FORWARD LENGTH=1736
Length=1736
Score = 684 bits (370), Expect = 0.0
Identities = 581/682 (85%), Gaps = 17/682 (2%)
Strand=Plus/Plus
Query 1768 CTTAAGTATGGAACACTTATGTCCCTCCAACGCCAATTAGAAGAAGCTGAG-AAGAATCT 1826
|||||||||||||| ||| | ||||||||| || | |||||||||||| || ||||| ||
Sbjct 27 CTTAAGTATGGAACCCTTGTATCCCTCCAAGGCTAGTTAGAAGAAGCT-AGAAAGAACCT 85
Query 1827 CACGAATTTCCGACAGTC-TGGACAGTCACTACTCCGAGAAGAGGTTACCGATCTTGACA 1885
||| ||||| || || | || ||| || ||| |||||||| | || ||| | ||| |||
Sbjct 86 CACAAATTTTAGAAAG-CATGAACATTCCCTAGTCCGAGAATAAGTAACCAAGCTTAACA 144
Query 1886 TAGCA-GAAATAGTAAGCAAGTGGA-CTGGTATTCCACTATCTAATCTTCAGCAATCAGA 1943
||| | || ||||||||||||| || || |||||||||||| |||||||||||||||||
Sbjct 145 TAG-AGGATATAGTAAGCAAGT-GACCT-ATATTCCACTATCCAATCTTCAGCAATCAGA 201
Query 1944 GAGAGAAAAGCTAGTCATGTTGGAACAAGTTCTCCACCATAGAGTTGTTGGTCAAGACAT 2003
|||||||||| ||||||||||||||||| | |||||| | ||||| ||| ||||||| |
Sbjct 202 GAGAGAAAAGTTAGTCATGTTGGAACAAATCCTCCACGAGAGAGTAATTGCTCAAGACTT 261
Query 2004 GGCTGTGA-AATCAGTAGCAGATGCTATCCGACGTTCAAGGGCTGGCCTTTCTGATCCTA 2062
| ||| | | ||||| || ||||||||||| |||||| |||||| |||| |||||||
Sbjct 262 AGATGT-AGAGTCAGTTGCCGATGCTATCCGTTGTTCAAAGGCTGGTATTTCAGATCCTA 320
Query 2063 ACCGCCCAATAGCTAGTTTCATGTTCATGGGTCCAACAGGTGTTGGTAAGACCGAGCTTG 2122
||||||| ||||||||||| ||||||||||| |||||| |||||||||||||||||||||
Sbjct 321 ACCGCCCTATAGCTAGTTTTATGTTCATGGGACCAACAAGTGTTGGTAAGACCGAGCTTG 380
Query 2123 CCAAGGCTCTAGCGGGATACCTTTTTAACACTGAAAATGCAATAGTGAGGATCGATATGA 2182
||||||| ||||| ||||||||||| |||| |||||| |||||||||||||| |||||||
Sbjct 381 CCAAGGCACTAGCTGGATACCTTTTCAACAATGAAAACGCAATAGTGAGGATAGATATGA 440
Query 2183 GTGAGTATATGGAAAAATTC-TCAGTCTCGCGGCTTGTTGGTGCACCACCGGGCTATGTT 2241
| |||| ||||||||| | | |||||| | ||| ||||||||| || |||||||||
Sbjct 441 TTTAGTACATGGAAAAAA-CGTTAGTCTCACAGCTCGTTGGTGCATCAGTTGGCTATGTT 499
Query 2242 GGTTATGAAGAAGGTGGGCAATTAACTGAAGTTGTTCGGAGGAGACCTTACTCGGTGGTT 2301
||||| ||||| |||||| ||| ||||||||||||||| ||||||||||| || ||||||
Sbjct 500 GGTTACGAAGACGGTGGGAAATCAACTGAAGTTGTTCGAAGGAGACCTTATTCAGTGGTT 559
Query 2302 CTGTTTGATGAGATCGAGAAAGCC-CACCCTGATGTCTTTAATATCTTGCTACAACTGCT 2360
| ||||||||||||||||||| || |||||| ||||||| | ||||||||||||||| ||
Sbjct 560 CAGTTTGATGAGATCGAGAAA-CCGCACCCTAATGTCTTCAGTATCTTGCTACAACTACT 618
Query 2361 AGACGATGGAAGAATAACTGATTCTCAAGGGAGGACAGTAAGTTTCAAAAACTG-TGTTG 2419
||||||||||||||||||||||||||| || |||||||||||||||| |||||| | |||
Sbjct 619 AGACGATGGAAGAATAACTGATTCTCATGGTAGGACAGTAAGTTTCACAAACTGCT-TTG 677
Query 2420 TAATTATGACGTCAAATATAGG 2441
|||| || ||||| ||||||||
Sbjct 678 TAATAATTACGTCTAATATAGG 699
> AT3G31906.1 | Symbols: | pseudogene, ATP-dependent CLPB protein,
blastp match of 74% identity and 9.9e-102 P-value to GP|9651530|gb|AAF91178.1|AF203700_1|AF203700
ClpB {Phaseolus lunatus}
| chr3:12896942-12898508 FORWARD LENGTH=1567
Length=1567
Score = 625 bits (338), Expect = 9e-178
Identities = 572/684 (84%), Gaps = 19/684 (3%)
Strand=Plus/Plus
Query 1768 CTTAAGTATGGAACACTTATGTCCCTCCAACGCCAATTAGAAGAAGCTGAG-AAGAATCT 1826
|||||||||||||| ||| | ||||||||| |||| |||||||||||| || ||||| ||
Sbjct 17 CTTAAGTATGGAACCCTTGTATCCCTCCAAGGCCAGTTAGAAGAAGCT-AGAAAGAACCT 75
Query 1827 CACGAATTTC-CGACAGTC-TGGACAGTCACTACTCCGAGAAGAGGTTACCGATCTTGAC 1884
||| || ||| || || | || ||| || ||| |||||||| | || ||| | ||| ||
Sbjct 76 CAC-AAATTCTAGAAAG-CATGAACATTCCCTAGTCCGAGAATAAGTAACCAAGCTTAAC 133
Query 1885 ATAGCAGAAATAGTAAGCAAGTGGA-CTGGTATTCCACTATCTAATCTTCAGCAATCAGA 1943
||||| || ||||||||||||| || || ||||||||| || |||||| | ||||||||
Sbjct 134 ATAGCGGATATAGTAAGCAAGT-GACCT-ATATTCCACTGTCCAATCTTTACCAATCAGA 191
Query 1944 GAGAGAAAAGCTAGTCATGTTGGAACAAGTTCTCCACCATAGAGTTGTTGGTCAAGACAT 2003
|||||||||| ||||||||||||||||| | |||||| | ||| || ||| | ||||| |
Sbjct 192 GAGAGAAAAGTTAGTCATGTTGGAACAACTGCTCCACGAGAGACTTATTGCTTAAGACTT 251
Query 2004 GGCTGTGA-AATCAGTAGCAGATGCTATCCGACGTTCAAGGGCTGGCCTTTCTGATCCTA 2062
|| ||| | | ||||| || ||| ||||||| |||||| |||||| |||| |||||||
Sbjct 252 GGATGT-AGAGTCAGTTGCCGATTCTATCCGTTGTTCAAAGGCTGGTATTTCAGATCCTA 310
Query 2063 ACCGCCCAATAGCTAGTTTCATGTTCATGGGTCCAACAGGTGTTGGTAAGACCGAGCTTG 2122
||| ||| |||||||||| ||||||||||| |||||| |||||||||||| ||||||||
Sbjct 311 ACCACCCTGTAGCTAGTTTTATGTTCATGGGACCAACAAGTGTTGGTAAGATCGAGCTTG 370
Query 2123 CCAAGGCTCTAGCGGGATACCTTTTTAACACTGAAAATGCAATAGTGAGGATCGATATGA 2182
|||||| |||| |||||| |||| |||| |||||| |||||||||||||| |||||||
Sbjct 371 CCAAGGAAATAGCTGGATACATTTTCAACAATGAAAACGCAATAGTGAGGATAGATATGA 430
Query 2183 GTGAGTATATGGAAAAATTC-TCAGTCTCGCGGCTTGTTGGTGCACCACCGGGCTATGTT 2241
|| |||| ||||||||| | |||||||| | ||| ||||||||| ||| |||||||||
Sbjct 431 GTTAGTACATGGAAAAA-ACGTCAGTCTCACAGCTCGTTGGTGCATCACTTGGCTATGTT 489
Query 2242 GGTTATGAAGAAGGTGGGCAATTAACTGAAGTTGTTCGGAGGAGACCTTACTCGGTGGTT 2301
||||| ||||| |||||| ||| ||||||||||||||| ||||||||||| || ||||||
Sbjct 490 GGTTACGAAGACGGTGGGAAATCAACTGAAGTTGTTCGCAGGAGACCTTATTCAGTGGTT 549
Query 2302 CTGTTTGATGAGATCGAGAAAGCC-CACCCTGATGTCTTTAATATCTTGCTACAACTGCT 2360
| ||||||||||||||||||| || |||| ||||| || | ||||||||||||| | |
Sbjct 550 CAGTTTGATGAGATCGAGAAA-CCGCACCATGATGGATTCAGTATCTTGCTACAAATAAT 608
Query 2361 AGACGATGGAAGAATAACTGATTCTCAAGGGAGGACAGTAAGTTTCAAAAACTG-TGTTG 2419
||||||||||||||||||||||||||| || |||||||||||||||| |||||| | |||
Sbjct 609 AGACGATGGAAGAATAACTGATTCTCATGGTAGGACAGTAAGTTTCACAAACTGCT-TTG 667
Query 2420 TAATTAT-GACGTCAAATATAGGA 2442
|||| || | |||| |||||||||
Sbjct 668 TAATAATTG-CGTCTAATATAGGA 690
> AT2G25030.1 | Symbols: | pseudogene, HSP100/ClpB, putative,
similar to HSP100/ClpB GI:9651530 (Phaseolus lunatus); blastp
match of 77% identity and 3.4e-113 P-value to GP|9651530|gb|AAF91178.1|AF203700_1|AF203700
ClpB {Phaseolus lunatus} |
chr2:10648663-10650450 FORWARD LENGTH=1788
Length=1788
Score = 590 bits (319), Expect = 3e-167
Identities = 487/568 (86%), Gaps = 11/568 (2%)
Strand=Plus/Plus
Query 1879 CTTGACATAGCAGAAATAGTAAGCAAGTGGA-CTGGTATTCCACTATCTAATCTTCAGCA 1937
||| ||||||| || ||||||||||||| || || ||||||||| || |||||||||||
Sbjct 6 CTTAACATAGCGGATATAGTAAGCAAGT-GACCT-ATATTCCACTGTCCAATCTTCAGCA 63
Query 1938 ATCAGAGAGAGAAAAGCTAGTCATGTTGGAACAAGTTCTCCACCATAGAGTTGTTGGTCA 1997
|||||||||||||||||||||||||||||||||| | |||||| | ||| | ||| |||
Sbjct 64 ATCAGAGAGAGAAAAGCTAGTCATGTTGGAACAAATACTCCACGAGAGAATAATTGCTCA 123
Query 1998 AGACATGGCTGT-GAAATCAGTAGCAGATGCTATCCGACGTTCAAGGGCTGGCCTTTCTG 2056
|||| ||| ||| || ||||| || ||||||||||| |||||| |||||| |||| |
Sbjct 124 AGACTTGGATGTAGAG-TCAGTTGCCGATGCTATCCGTTGTTCAAAGGCTGGTATTTCAG 182
Query 2057 ATCCTAACCGCCCAATAGCTAGTTTCATGTTCATGGGTCCAAC-AGGTGTTGGTAAGACC 2115
|||||||||||| ||||||||||| ||||||||||| | ||| | ||||||||||||||
Sbjct 183 ATCCTAACCGCCTTATAGCTAGTTTTATGTTCATGGGAC-AACCAAGTGTTGGTAAGACC 241
Query 2116 GAGCTTGCCAAGGCTCTAGCGGGATACCTTTTTAACACTGAAAATGCAATAGTGAGGATC 2175
|||||||||||||| ||||| ||||||||||| |||| |||||| |||||||||||||
Sbjct 242 GAGCTTGCCAAGGCACTAGCTGGATACCTTTTCAACAATGAAAACACAATAGTGAGGATA 301
Query 2176 GATATGAGTGAGTATATGGAAAAATTC-TCAGTCTCGCGGCTTGTTGGTGCACCACCGGG 2234
||||||||| || | ||||||||| | | |||||| | ||| ||||||||| |||| ||
Sbjct 302 GATATGAGTTAGCACATGGAAAAAA-CGTTAGTCTCACAGCTCGTTGGTGCATCACCTGG 360
Query 2235 CTATGTTGGTTATGAAGAAGGTGGGCAATTAACTGAAGTTGTTCGGAGGAGACCTTACTC 2294
|||||||||||| | ||| |||||| ||||||||||||||||||| ||||||||||| ||
Sbjct 361 CTATGTTGGTTACGGAGACGGTGGGAAATTAACTGAAGTTGTTCGAAGGAGACCTTATTC 420
Query 2295 GGTGGTTCTGTTTGATGAGATCGAGAAAGCC-CACCCTGATGTCTTTAATATCTTGCTAC 2353
||||||| ||||||||||||||||||| || |||| ||||||||| | ||||||||| |
Sbjct 421 AGTGGTTCAGTTTGATGAGATCGAGAAA-CCGCACCTTGATGTCTTCAGTATCTTGCTTC 479
Query 2354 AACTGCTAGACGATGGAAGAATAACTGATTCTCAAGGGAGGACAGTAAGTTTCAAAAACT 2413
|||| ||||||||||||||||||||| ||||||| || |||||| ||||||||| |||||
Sbjct 480 AACTACTAGACGATGGAAGAATAACTAATTCTCATGGTAGGACACTAAGTTTCACAAACT 539
Query 2414 GTGTTGTAATTATGACGTCAAATATAGG 2441
|| ||||||| || || || ||||||||
Sbjct 540 GTTTTGTAATAATTACATCTAATATAGG 567
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 145082799156
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5