BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg900935
Length=2163
Score E
Sequences producing significant alignments: (Bits) Value
AT2G31280.3 | Symbols: CPUORF7 | conserved peptide upstream ope... 3219 0.0
AT1G06149.1 | Symbols: CPuORF8 | conserved peptide upstream ope... 1147 0.0
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) ... 1147 0.0
> AT2G31280.3 | Symbols: CPUORF7 | conserved peptide upstream open
reading frame 7 | chr2:13339087-13343662 FORWARD LENGTH=3043
Length=3043
Score = 3219 bits (1743), Expect = 0.0
Identities = 1966/2077 (95%), Gaps = 2/2077 (0%)
Strand=Plus/Plus
Query 1 ATGGGTTCTACTTCTCAAGAGATACTGAGGAGCTTTTGCTCTAACACGGACTGGAACTAT 60
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||
Sbjct 592 ATGGGTTCTACTTCTCAAGAGATACTGAAGAGCTTTTGCTTTAACACGGACTGGGACTAT 651
Query 61 GCTGTGTTCTGGCAACTTAAACACCAAGGATCTCGAATGGTACTTACCTTGGAGGATGCT 120
|||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||
Sbjct 652 GCTGTGTTCTGGCAACTTAATCATCGAGGATCTCGAATGGTACTTACCTTGGAGGATGCT 711
Query 121 TACTATGACCATCATGGGACGAATATTCATGGAGCACATGACCCCCTTGGGTTAGCTGTG 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 712 TACTATGACCATCATGGGACGAATATGCATGGAGCACATGACCCCCTTGGGTTAGCTGTG 771
Query 181 GCAAAGATGTCTTATCATGTCTATTCTCTAGGGGAAGGGATTGTAGGACAAGTCGCAGTT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 772 GCAAAGATGTCTTATCATGTCTATTCTCTAGGGGAAGGGATTGTAGGACAAGTTGCAGTT 831
Query 241 TCTGGAGAACACCAATGGGTATTCCCCGAAAATTATGACAACTGTCACTCAGCATTTGAG 300
||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||
Sbjct 832 TCTGGAGAACACCAATGGGTATTTCCCGAAAATTATAACAACTGTAACTCAGCATTTGAG 891
Query 301 TTTCATAACGTTTGGGAGAGTCAAATTTCTGCTGGAATTAAGACCATTCTTGTAGTAGCT 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 892 TTTCATAACGTTTGGGAAAGTCAAATTTCTGCTGGAATTAAGACCATTCTTGTAGTAGCT 951
Query 361 GTTGGTCGATATGGAGTAGTGCAGCTAGGCTCTTTGTGTAAAGTTAATGAAGATGTGAAT 420
||||||| || |||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 952 GTTGGTCCATGTGGAGTTGTTCAGCTAGGCTCTTTGTGTAAAGTTAATGAAGATGTGAAT 1011
Query 421 TTGGTGAATCATATGCGACATTTATTTCTGGCACTTAGGGATCCATTGGCAGATCATGCA 480
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1012 TTTGTGAATCATATCCGACATTTATTTCTGGCACTTAGGGATCCATTGGCAGACCATGCA 1071
Query 481 GCAAATTTAATGCAATGTAATATGAACAATTCGTTGTGTCTGCCAAATATGCCTTCTGAA 540
|||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1072 GCAAATTTAAGGCAATGTAATATGAACAATTCGTTATGTCTGCCAAAAATGCCTTCTGAA 1131
Query 541 GGCTTACATGCCGAGGCTTTCCCTGATTGCTCTGGAGAAGTTGACAAAGCTATGGATGTG 600
|| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1132 GGTTTACATGCTGAGGCTTTCCCTGATTGCTCTGGAGAAGTTGACAAAGCTATGGACGTG 1191
Query 601 GAAGAATCCAATATTTTAACTCAATACAAAACTAGAAGAAGTGATAGCATGCCTTACAAT 660
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1192 GAAGAGTCCAATATTCTAACTCAATACAAAACTAGAAGAAGTGATAGCATGCCTTACAAT 1251
Query 661 ACTCCTTCGTCATGTCTTGTCATGGAGAAGACAGCTCAAGTTGTTGGTGGTCGTGAAGTG 720
|||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 1252 ACTCCTTCGTCATGTCTTGTCATGGAGAAGGCAGCCCAAGTTGTTGGTGGTCGTGAAGTT 1311
Query 721 GTGCAAGGATCTACGTGTGGGAGCTATAGCGGTGTTACATGTGGCTTTCCAGTTGACTTG 780
|||||||||||||| |||||||| ||||| |||||||| | |||||||||||||||||||
Sbjct 1312 GTGCAAGGATCTACTTGTGGGAGTTATAGTGGTGTTACGTTTGGCTTTCCAGTTGACTTG 1371
Query 781 GTTGGTGCCAAACATGAGAATCAAGTAGGTACAAATATAATCAGTGATGCACCTCATGTG 840
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 1372 GTTGGTGCCAAACATGAGAATCAAGTAGGTACTAATATAATCAGGGATGCACCTCATGTG 1431
Query 841 GGAATGACTAGTGGCTGCAAAGATCCAAGAGGATT-AGATCCTAATTTTCATAAGTATAT 899
|||||||||||||||||||||||| |||| ||||| |||||||||||| ||| ||||||
Sbjct 1432 GGAATGACTAGTGGCTGCAAAGATTCAAG-GGATTTAGATCCTAATTTACATCTGTATAT 1490
Query 900 GAAGAATCATGTGCTCAATAATACAAGCTCATCTGCTTTAGCAATTGAGGCTGAAAGATT 959
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 1491 GAAGAATCATGTGCTCAATGATACAAGCACATCTGCTTTAGCAATTGAGGCTGAAAGATT 1550
Query 960 GATAACAGGCCAATCATATCCAGGCCTGGACTCAACTCTTCAGGCTATGTCGAGAACAGA 1019
||||||| |||||||||||||| |||||||||||||| ||||||||| |||||||||||
Sbjct 1551 GATAACAAGCCAATCATATCCACGCCTGGACTCAACTTTTCAGGCTACCTCGAGAACAGA 1610
Query 1020 TAAAGAAAGTTCTTATCAAAACGAAGTATTCCAACTATCGGAGAACCACGGAAATAAAGA 1079
||||||||||||||| || || ||||| ||||||||||| |||||||| ||||||||| |
Sbjct 1611 TAAAGAAAGTTCTTACCATAATGAAGTGTTCCAACTATCTGAGAACCAAGGAAATAAATA 1670
Query 1080 CATAAAAGAGACTGACCGTATGCTGGGGAGGAACTGCGAGTCTAGTCGATTTGATGCTTT 1139
||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1671 CATAAAAGAGACTGAGCGTATGCTGGGGAGGAACTGCGAGTCTAGTCAATTTGATGCTTT 1730
Query 1140 GATGTCATCTGGTTATACTTTTGGTGGCAGCGAGCTACTAGAGGCGTTAGGCTCTGCTTT 1199
||| |||||||| |||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 1731 GATCTCATCTGGGTATACTTTTGCTGGCAGCGAGCTACTAGAAGCGTTAGGCTCTGCTTT 1790
Query 1200 CAAGCAAGCGAGCACTGGTCAGGAGGAGCTACTGAAGTCTGAACATGGTTCAACAATGAG 1259
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1791 CAAGCAAACGAACACTGGTCAGGAGGAGCTACTGAAGTCTGAACATGGTTCAACAATGAG 1850
Query 1260 ACCAACAGATGATATGAGTCATAGCCAGCTGACATTTGACTCTGGCCCTGAGAATCTTCT 1319
||||||||| |||||||||||||||||||| || |||||| |||||||||||||||||||
Sbjct 1851 ACCAACAGACGATATGAGTCATAGCCAGCTCACGTTTGACCCTGGCCCTGAGAATCTTCT 1910
Query 1320 AGATGCTGTGGTTGCTAATGTGTGTCAAAGCGATGGTAATTCCAGGGATGATATGTTGTC 1379
|||||||||||||||||||||||||||||| ||||||||| | |||||||||||| ||||
Sbjct 1911 AGATGCTGTGGTTGCTAATGTGTGTCAAAGAGATGGTAATGCGAGGGATGATATGATGTC 1970
Query 1380 GAGCAGATCGGTACAATCATTGCTTACCAGCATGGAACTTGCAGAACCCTCAGGTCAAAA 1439
||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||
Sbjct 1971 GAGCAGATCGGTACAATCATTGCTTACTAACATGGAACTGGCAGAACCCTCAGGTCAGAA 2030
Query 1440 GAAGCATAATATTGTTTACCCAATTGATAGTGCTATGAATCAGCTACCACTTGCAGAGGT 1499
|||||||||||||||| |||||||| |||||||||||||||||| |||| | ||||||||
Sbjct 2031 GAAGCATAATATTGTTAACCCAATTAATAGTGCTATGAATCAGCCACCAATGGCAGAGGT 2090
Query 1500 GGATATCCAACAAAATTCATCAGATATCTGTGGAGCATTTTCTTCGATTGGGTTCTCATC 1559
||||| ||||||||||||||||||||| |||||||| |||||||| ||||| ||||||||
Sbjct 2091 GGATACCCAACAAAATTCATCAGATATTTGTGGAGCGTTTTCTTCAATTGGATTCTCATC 2150
Query 1560 TACGTATCCCAGCTCCTCTAGTGATCAGTTTCAGACATCCCTGGACATGCCCAAGAAGAA 1619
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2151 TACGTACCCCAGCTCCTCTAGTGATCAGTTTCAGACATCCCTGGACATACCCAAGAAGAA 2210
Query 1620 CAAAAAGAGGGCCAAGCCTGGTGAAAGTTCTCGACCTCGCCCAAGAGACAGACAACTCAT 1679
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 2211 CAAAAAGAGGGCCAAACCTGGTGAAAGTTCTCGACCTCGCCCAAGAGACAGGCAACTTAT 2270
Query 1680 TCAGGATCGAATCAAGGAACTTAGAGAACTTGTACCTAATGGAGCTAAGTGCAGTATTGA 1739
||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||
Sbjct 2271 TCAAGATCGAATCAAGGAACTTAGAGAACTTGTGCCTAATGGATCTAAGTGCAGTATCGA 2330
Query 1740 TTCTTTGCTCGAACGCACGATCAAGCACATGCTCTTTTTGCAGAATGTTACTAAGCATGC 1799
||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2331 TTCTTTGCTAGAACGAACGATCAAACACATGCTCTTTTTGCAGAATGTTACTAAGCATGC 2390
Query 1800 TGACAAGCTCAGTAAAAGTGCTAATGCAAAGATGCAACAAAAGGAAACTGGTATGCAAGG 1859
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2391 TGAAAAGCTCAGTAAAAGTGCTAATGAAAAGATGCAACAAAAGGAAACTGGTATGCAAGG 2450
Query 1860 TTCAAGCTGCGCAGTGGAGGTTGGAGGCCATCTTCAAGTATGCTCGATCATCGTGGAGAA 1919
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||
Sbjct 2451 TTCAAGCTGCGCAGTGGAGGTTGGAGGTCATCTTCAAGTAAGCTCGATCATCGTGGAGAA 2510
Query 1920 TCTGAACAAGCAGGGGATGGTGCTCATCGAGATGTTATGTGAAGAATGTAGCCATTTTCT 1979
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 2511 TCTGAACAAGCAGGGGATGGTGCTTATCGAGATGTTATGTGAAGAATGTGGCCATTTTCT 2570
Query 1980 TGAGATAGCAAACGTGATTAGGAGCTTAGACCTCATCATCTTAAGAGGAATCACCGAGAC 2039
||||||||||||||| || ||||||||||||||| ||||| ||||||| ||||||||||
Sbjct 2571 TGAGATAGCAAACGTCATAAGGAGCTTAGACCTCGTCATCCTAAGAGGTTTCACCGAGAC 2630
Query 2040 TCAGGGCGAGAAAACATGGATATGCTTTGTAACTGAG 2076
|||||||||||||||||||||||||||||||||||||
Sbjct 2631 TCAGGGCGAGAAAACATGGATATGCTTTGTAACTGAG 2667
Score = 141 bits (76), Expect = 3e-32
Identities = 76/76 (100%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 2077 AGCCAAAACAGCAAAGTAATGCAGAGGATGGACATTTTGTGGTCTCTGGTGCAAATATTT 2136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2719 AGCCAAAACAGCAAAGTAATGCAGAGGATGGACATTTTGTGGTCTCTGGTGCAAATATTT 2778
Query 2137 CAACCAAAGGCCAATG 2152
||||||||||||||||
Sbjct 2779 CAACCAAAGGCCAATG 2794
> AT1G06149.1 | Symbols: CPuORF8 | conserved peptide upstream open
reading frame 8 | chr1:1868989-1873718 REVERSE LENGTH=2968
Length=2968
Score = 1147 bits (621), Expect = 0.0
Identities = 1733/2249 (77%), Gaps = 159/2249 (7%)
Strand=Plus/Plus
Query 1 ATGGGTTCTA-CTTCTCAAGAGATACTGAGGAGCTTTTGCTCTAACACGGACTGGAACTA 59
||||||| || ||| ||| |||||||||||||| | ||||| |||||||| ||||||||
Sbjct 525 ATGGGTTATACCTT-GCAACAGATACTGAGGAGCATCTGCTCCAACACGGATTGGAACTA 583
Query 60 TGCTGTGTTCTGGCAACTTAAACACCAAGGATCTCGAATGGTACTTACCTTGGAGGATGC 119
|| ||||||||| ||||||| |||| | || | |||||| ||||| ||||||||||
Sbjct 584 CGCCGTGTTCTGGAAACTTAATCACC-A--CTCGCCAATGGTTCTTACTTTGGAGGATG- 639
Query 120 T-TACTATG---ACCAT---CATGG---GA---C-G-AATATT-CATGGA----G-CA-- 156
| |||| || | ||| | || || | | || || |||||| | ||
Sbjct 640 TGTACTGTGTTAATCATGAGCGCGGTTTGATGCCGGAAAGCTTGCATGGAGGGCGCCATG 699
Query 157 --CATGACCCCCTTGGGTTAGCTGTGGCAAAGATGTCTTATCATGT-CTATTCTCTAGGG 213
|||||||| ||||||||||||||||| |||||||| |||||||| | | ||||| |||
Sbjct 700 CTCATGACCCTCTTGGGTTAGCTGTGGCTAAGATGTCATATCATGTAC-ACTCTCTTGGG 758
Query 214 GAAGGGATTGTAGGACAAGTCGCAGTTTCTGGAGAACACCAATGGGTATTCCCCGAAAAT 273
|||||||||||||||||||| ||| | |||||| |||| |||||| | ||| | ||| ||
Sbjct 759 GAAGGGATTGTAGGACAAGTAGCAATCTCTGGACAACATCAATGGATCTTCTCTGAATAT 818
Query 274 TATG-ACAACTGTCACTCAG-CATTTGAGTTTCATAACGTTTGGGAGAGTCAAATTTCTG 331
| || | ||| ||| || | || || || |||| |||| ||||||||||||||||||||
Sbjct 819 T-TGAATGACTCTCATTC-GACACTTCAGGTTCACAACGGTTGGGAGAGTCAAATTTCTG 876
Query 332 CTGGAATTAAGACCATTCTTGTAGTAGCTGTTGGT-CGATATGGAGTAGTGCAGCTAGGC 390
||||||||||||| |||||| |||||||||||||| | | ||||| |||||||| |||
Sbjct 877 CTGGAATTAAGACAATTCTTATAGTAGCTGTTGGTTCT-TGCGGAGTTGTGCAGCTTGGC 935
Query 391 TCTTTGTGTAAAGTT-AATGAAGATGTGAATTTGGTGAATCATATGC-GACATTTATTTC 448
||||||||||||||| || ||||| | |||||||| |||||| | | |||||||||
Sbjct 936 TCTTTGTGTAAAGTTGAA-GAAGACCCGGCTTTGGTGACTCATAT-CAGGCATTTATTTT 993
Query 449 TGGCACTTAGGGATCCATTGGCAGATCATGCAGCAAATTTAATGCAATGTAATATGAACA 508
||||||||| ||||||| | ||||| |||||| ||||||||||||||||| |||| ||||
Sbjct 994 TGGCACTTACGGATCCACTAGCAGACCATGCATCAAATTTAATGCAATGTGATATTAACA 1053
Query 509 ATTCGTTGTG-TCTGCCAAATATGCCTTCTGAAGGCTTACATGCCGAGGCTTTCCCTGAT 567
| | | | | || |||||| || ||||| || ||||||||| |||| | |||||||
Sbjct 1054 GTCCATCG-GATCGGCCAAAAATACCTTCCAAATGCTTACATG---AGGCATCCCCTGAT 1109
Query 568 TGCTCTGGAGAAGTTGACAAAGCTATGGATGTGGAAGAATCCAATATTTTAACTCAATAC 627
| ||| |||||| ||||||||||||||||| |||||| | |||||| || ||||| ||
Sbjct 1110 TTCTCAGGAGAATTTGACAAAGCTATGGATATGGAAGGGTTAAATATTGTATCTCAAAAC 1169
Query 628 AAAACTAGA-AGAAGTGAT-AGCATGCCTTACAATACTC-CTTCGTCATGTCTTGTCATG 684
| || || | |||||| | | | | || |||||| || || | ||| | || ||||
Sbjct 1170 ACAAGTA-ATAGAAGTAACGACCTT-CCATACAATT-TCACTCCAACATATTTTCACATG 1226
Query 685 GAGAAGACAGCTCAAGTTGTTGGTGGTCGTGAAGTGGTGCAAGGATCTACGTGTGGGAGC 744
|||| ||| |||||||| ||||||| | ||||| || ||| || | || ||| |||
Sbjct 1227 GAGAGGACTGCTCAAGTAATTGGTGGGCTTGAAGCAGTCCAACCTTCCATGTTTGGAAGC 1286
Query 745 TAT-AGCGGTGTTACATGTGGCTTTCCAGTTGACT-TGGTTGGTGCCAAACATGAGAATC 802
|| | | ||||||| |||| ||| |||||| | |||||| | | ||||| ||||||
Sbjct 1287 AATGATTG-TGTTACAAGTGGTTTTTCAGTTGG-TGTGGTTGATACTAAACACAAGAATC 1344
Query 803 AAGTAGG-TACAAAT-ATAATCAGTGA--TGCACCTCATG-TG-GGAATGACTAG-TGGC 855
|||| || || || | ||| | ||| | || | | ||| || |||| || || |||
Sbjct 1345 AAGT-GGATATAAGTGATA-TGAGTAAGGTG-ATTT-ATGATGAGGAA--AC-AGGTGGA 1397
Query 856 TGCAAAGA-TCCAAGAGGATTAGATCCTAATTTTCATA-AGTA-TATGAAGAATCATGTG 912
| | | | || ||||| ||||||||| ||||| || | | || | || ||||||||||
Sbjct 1398 TACCGATACTC-AAGAGAATTAGATCCCAATTTCCA-ACACTACTC-GAGGAATCATGTG 1454
Query 913 C-TCAATAATACAAGCTCATCTGCTTTAGCAATTGAG-GCTGAAAGATTGATAA-CAGGC 969
| | |||| | | || ||||||||||||| || ||| | ||| || | | || ||||
Sbjct 1455 CGT-AATAGTGGAGGCACATCTGCTTTAGCTATGGAGAG-TGATAGGCTAA-AAGCAGGT 1511
Query 970 -CAATCATATCCAGGCCTGGACTCAACTCTTCAGGCTATGTCGAGAACAGATAAAGAA-A 1027
|| ||||||||| || || |||||| | | || || || |||||||||||| |
Sbjct 1512 TCA-TCATATCCACAACTTGATTCAACTGTACTTACTGCGTTGAAAACAGATAAAGATTA 1570
Query 1028 GTTCTTATCAAAACGAAGTATTCCAACTATCGGAGAACCACGGAAATAAAGACATAAAAG 1087
|||| || ||| || || ||||||| ||| |||| ||| |||| || | | ||||
Sbjct 1571 -TTCTCGTCGAAATGAGGTTTTCCAACCATCTGAGAGCCAAGGAAGTATATTTGTGAAAG 1629
Query 1088 AGACTGACCGTATGCTGG-GGAGGAACTGCGAGTCTAGTCGATTTG-ATGCTTTGA-TGT 1144
| || || | || || || ||| || | ||||| |||| | ||| ||||||| | ||
Sbjct 1630 ATACAGAACATAGGCAGGAGGAAAAAA-GTGAGTCAAGTC-AGTTGGATGCTTTAACTG- 1686
Query 1145 CATCTG-GT-TATACTTTTGGTGGCAGCGAGCTACTAGAGGCGTTAGG-CTCTGCTTTCA 1201
||||| || | | ||||| |||||| ||||| ||||||| ||||| | | || ||||
Sbjct 1687 CATCTTTGTGT-T-CTTTTTCTGGCAGTGAGCTGTTAGAGGCATTAGGGC-CAGCGTTCA 1743
Query 1202 AGCAAG-CGAGCACTGGTCA-GGAGGAGCTA-CTGAAGTCTGAA-CATGGTTCAACAATG 1257
| || | ||||||| | | || ||||||| | |||| |||| | || | || | ||
Sbjct 1744 -GTAAAACAAGCACTGATTATGG-GGAGCTAGCA-AAGTTTGAATC-TGCTGCAGCTATA 1799
Query 1258 AGACCAACAGATGATATGAGTCATAGCCAGCTGACATTTGACTCTGGC-CCTGAGAATCT 1316
|||| |||| |||||||||| ||||| || ||||||||||| || || || ||||||||
Sbjct 1800 AGACGAACAAATGATATGAGCCATAGTCACCTGACATTTGAATCCAGCTCC-GAGAATCT 1858
Query 1317 TCTAGATGCTGTGGTTGCTAATGTGTGTCAAAGC-GATGGTAAT-TCCAGG-GATGATAT 1373
||||||||| || ||||||| | || || || | ||||||||| || ||| | ||| ||
Sbjct 1859 TCTAGATGCCGTTGTTGCTAGTATGAGT-AATGGTGATGGTAATGTC-AGGCG-TGAAAT 1915
Query 1374 GT-TGTCGAGCAGATCGGTACAATCATTGCTTACCA--GC--A--TGGAACTTGCAGAAC 1426
| | || ||||| || ||| ||||||||||| | || | ||| || |||||||
Sbjct 1916 ATCT-TCAAGCAGGTCAACACAGTCATTGCTTACAACTGCTGAAATGGCACAGGCAGAAC 1974
Query 1427 CCTCAGGTCAAAAGAAGCATAATATTGTTTACC-CAATTGATAGTGCT-ATGAATCAGCT 1484
| | ||||| || ||||| ||||||||| | | || ||||||||| | || | ||||
Sbjct 1975 CTTTTGGTCATAATAAGCAAAATATTGTT-AGCACAGTTGATAGTG-TGATTAGCCAGCC 2032
Query 1485 ACCACTTGCAGAGGTGGAT-ATCCAACAAAATTCATCAGATATCTGTGGAGCATTTTCTT 1543
|| || ||||| | || | |||||||| ||| ||||| ||||||| |||||||||||||
Sbjct 2033 GCCTCTAGCAGATG-GGCTTATCCAACAGAATCCATCAAATATCTGCGGAGCATTTTCTT 2091
Query 1544 CGATTGGGTTCTCATCTACGTATCCCAGCTCCTCTAGTGATCAGTTTCAGACATCCCTGG 1603
| |||||||| ||||| || | || ||| || || || || ||||||| ||| |||||||
Sbjct 2092 CCATTGGGTTTTCATCAACATGTCTCAGTTCATCCAGCGACCAGTTTCCGACGTCCCTGG 2151
Query 1604 ACATGCCCAAGAAGAACAAAAAGAGGGCCAAGCCTGGTGAAAGTTCTCGACCTCGCCCAA 1663
| || |||||||||||||||||||| || || ||||||||||||||||| ||||| ||||
Sbjct 2152 AAATTCCCAAGAAGAACAAAAAGAGAGCTAAACCTGGTGAAAGTTCTCGGCCTCGTCCAA 2211
Query 1664 GAGACAGACAACTCATTCAGGATCGAATCAAGGAACTTAGAGAACTTGTACCTAATGGAG 1723
| ||||| ||||| ||||||||||| ||||| ||||| || || ||||| |||||||||
Sbjct 2212 GGGACAGGCAACTTATTCAGGATCGTATCAAAGAACTAAGGGAGCTTGTGCCTAATGGAT 2271
Query 1724 CTAAGTGCAGTATTGATTCTTTGCTCGAACGCACGATCAAGCACATGCTCTTTTTGCAGA 1783
||||||||||||||||||| ||||| || |||||||||||||||||||||| ||||||
Sbjct 2272 CTAAGTGCAGTATTGATTCCTTGCTAGAGTGCACGATCAAGCACATGCTCTTCCTGCAGA 2331
Query 1784 ATGT-TACTAAGCATGCTGACAAGCTCAGTAAAAGTGCTAA-TGCAAAGATGCAACAAAA 1841
||| | || |||||||||||||||||| ||||||||| || | ||||||||||||| ||
Sbjct 2332 GTGTCT-CTCAGCATGCTGACAAGCTCACTAAAAGTGC-AAGTTCAAAGATGCAACACAA 2389
Query 1842 GGA-A-----AC--T-GG--TAT---GCA---A----GGTTCAAGCTGCGCAGTGGAGGT 1880
||| | || | || ||| ||| | ||||| ||||| ||||||||| |
Sbjct 2390 GGATACCGGCACCCTAGGAATATCAAGCACTGAACAAGGTTCGAGCTGGGCAGTGGAGAT 2449
Query 1881 TGGAGGCCATCTTCAAGTATGCTCGATCATCGTGGAGAATCTGAACAA-GCAGGGGATGG 1939
|||||||||||| ||||| ||||| ||||| |||||||||||| |||| | ||| | ||
Sbjct 2450 TGGAGGCCATCTGCAAGTGTGCTCAATCATGGTGGAGAATCTGGACAAAGAAGGAG-TGA 2508
Query 1940 TGCTCATCGAGATGTTATGTGAAGAATGTAGCCATTTTCTTGAGATAGCAAACGTGATTA 1999
|||| || |||||| |||| |||||||||||||| ||||| |||||||| |||||||| |
Sbjct 2509 TGCTTATTGAGATGCTATGCGAAGAATGTAGCCACTTTCTCGAGATAGCGAACGTGATAA 2568
Query 2000 GGAGCTTAGACCTCATCATCTTAAGAGGAATCACCGAGACTCAGGGCGAGAAAACATGGA 2059
||||||| || ||||||||| | ||||| | ||| |||| || ||||||||||||||||
Sbjct 2569 GGAGCTTGGAACTCATCATCCTCAGAGGCACCACTGAGAAACAAGGCGAGAAAACATGGA 2628
Query 2060 TATGCTTTGTAACTG-AGAGCCAAAACAGCAAAGTAATGCAGAGGATGGACATTTTGTGG 2118
|||| |||||| || || | ||||||| |||||||||||| ||||||||||| |||||
Sbjct 2629 TATGTTTTGTAG-TGGAGGGACAAAACAACAAAGTAATGCACAGGATGGACATCCTGTGG 2687
Query 2119 TCTCTGGTGCAAATATTTCAACCAAAGGC 2147
||||| ||||||||||||||||| |||||
Sbjct 2688 TCTCTTGTGCAAATATTTCAACCCAAGGC 2716
> AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867015-1873718 REVERSE
LENGTH=4607
Length=4607
Score = 1147 bits (621), Expect = 0.0
Identities = 1733/2249 (77%), Gaps = 159/2249 (7%)
Strand=Plus/Plus
Query 1 ATGGGTTCTA-CTTCTCAAGAGATACTGAGGAGCTTTTGCTCTAACACGGACTGGAACTA 59
||||||| || ||| ||| |||||||||||||| | ||||| |||||||| ||||||||
Sbjct 525 ATGGGTTATACCTT-GCAACAGATACTGAGGAGCATCTGCTCCAACACGGATTGGAACTA 583
Query 60 TGCTGTGTTCTGGCAACTTAAACACCAAGGATCTCGAATGGTACTTACCTTGGAGGATGC 119
|| ||||||||| ||||||| |||| | || | |||||| ||||| ||||||||||
Sbjct 584 CGCCGTGTTCTGGAAACTTAATCACC-A--CTCGCCAATGGTTCTTACTTTGGAGGATG- 639
Query 120 T-TACTATG---ACCAT---CATGG---GA---C-G-AATATT-CATGGA----G-CA-- 156
| |||| || | ||| | || || | | || || |||||| | ||
Sbjct 640 TGTACTGTGTTAATCATGAGCGCGGTTTGATGCCGGAAAGCTTGCATGGAGGGCGCCATG 699
Query 157 --CATGACCCCCTTGGGTTAGCTGTGGCAAAGATGTCTTATCATGT-CTATTCTCTAGGG 213
|||||||| ||||||||||||||||| |||||||| |||||||| | | ||||| |||
Sbjct 700 CTCATGACCCTCTTGGGTTAGCTGTGGCTAAGATGTCATATCATGTAC-ACTCTCTTGGG 758
Query 214 GAAGGGATTGTAGGACAAGTCGCAGTTTCTGGAGAACACCAATGGGTATTCCCCGAAAAT 273
|||||||||||||||||||| ||| | |||||| |||| |||||| | ||| | ||| ||
Sbjct 759 GAAGGGATTGTAGGACAAGTAGCAATCTCTGGACAACATCAATGGATCTTCTCTGAATAT 818
Query 274 TATG-ACAACTGTCACTCAG-CATTTGAGTTTCATAACGTTTGGGAGAGTCAAATTTCTG 331
| || | ||| ||| || | || || || |||| |||| ||||||||||||||||||||
Sbjct 819 T-TGAATGACTCTCATTC-GACACTTCAGGTTCACAACGGTTGGGAGAGTCAAATTTCTG 876
Query 332 CTGGAATTAAGACCATTCTTGTAGTAGCTGTTGGT-CGATATGGAGTAGTGCAGCTAGGC 390
||||||||||||| |||||| |||||||||||||| | | ||||| |||||||| |||
Sbjct 877 CTGGAATTAAGACAATTCTTATAGTAGCTGTTGGTTCT-TGCGGAGTTGTGCAGCTTGGC 935
Query 391 TCTTTGTGTAAAGTT-AATGAAGATGTGAATTTGGTGAATCATATGC-GACATTTATTTC 448
||||||||||||||| || ||||| | |||||||| |||||| | | |||||||||
Sbjct 936 TCTTTGTGTAAAGTTGAA-GAAGACCCGGCTTTGGTGACTCATAT-CAGGCATTTATTTT 993
Query 449 TGGCACTTAGGGATCCATTGGCAGATCATGCAGCAAATTTAATGCAATGTAATATGAACA 508
||||||||| ||||||| | ||||| |||||| ||||||||||||||||| |||| ||||
Sbjct 994 TGGCACTTACGGATCCACTAGCAGACCATGCATCAAATTTAATGCAATGTGATATTAACA 1053
Query 509 ATTCGTTGTG-TCTGCCAAATATGCCTTCTGAAGGCTTACATGCCGAGGCTTTCCCTGAT 567
| | | | | || |||||| || ||||| || ||||||||| |||| | |||||||
Sbjct 1054 GTCCATCG-GATCGGCCAAAAATACCTTCCAAATGCTTACATG---AGGCATCCCCTGAT 1109
Query 568 TGCTCTGGAGAAGTTGACAAAGCTATGGATGTGGAAGAATCCAATATTTTAACTCAATAC 627
| ||| |||||| ||||||||||||||||| |||||| | |||||| || ||||| ||
Sbjct 1110 TTCTCAGGAGAATTTGACAAAGCTATGGATATGGAAGGGTTAAATATTGTATCTCAAAAC 1169
Query 628 AAAACTAGA-AGAAGTGAT-AGCATGCCTTACAATACTC-CTTCGTCATGTCTTGTCATG 684
| || || | |||||| | | | | || |||||| || || | ||| | || ||||
Sbjct 1170 ACAAGTA-ATAGAAGTAACGACCTT-CCATACAATT-TCACTCCAACATATTTTCACATG 1226
Query 685 GAGAAGACAGCTCAAGTTGTTGGTGGTCGTGAAGTGGTGCAAGGATCTACGTGTGGGAGC 744
|||| ||| |||||||| ||||||| | ||||| || ||| || | || ||| |||
Sbjct 1227 GAGAGGACTGCTCAAGTAATTGGTGGGCTTGAAGCAGTCCAACCTTCCATGTTTGGAAGC 1286
Query 745 TAT-AGCGGTGTTACATGTGGCTTTCCAGTTGACT-TGGTTGGTGCCAAACATGAGAATC 802
|| | | ||||||| |||| ||| |||||| | |||||| | | ||||| ||||||
Sbjct 1287 AATGATTG-TGTTACAAGTGGTTTTTCAGTTGG-TGTGGTTGATACTAAACACAAGAATC 1344
Query 803 AAGTAGG-TACAAAT-ATAATCAGTGA--TGCACCTCATG-TG-GGAATGACTAG-TGGC 855
|||| || || || | ||| | ||| | || | | ||| || |||| || || |||
Sbjct 1345 AAGT-GGATATAAGTGATA-TGAGTAAGGTG-ATTT-ATGATGAGGAA--AC-AGGTGGA 1397
Query 856 TGCAAAGA-TCCAAGAGGATTAGATCCTAATTTTCATA-AGTA-TATGAAGAATCATGTG 912
| | | | || ||||| ||||||||| ||||| || | | || | || ||||||||||
Sbjct 1398 TACCGATACTC-AAGAGAATTAGATCCCAATTTCCA-ACACTACTC-GAGGAATCATGTG 1454
Query 913 C-TCAATAATACAAGCTCATCTGCTTTAGCAATTGAG-GCTGAAAGATTGATAA-CAGGC 969
| | |||| | | || ||||||||||||| || ||| | ||| || | | || ||||
Sbjct 1455 CGT-AATAGTGGAGGCACATCTGCTTTAGCTATGGAGAG-TGATAGGCTAA-AAGCAGGT 1511
Query 970 -CAATCATATCCAGGCCTGGACTCAACTCTTCAGGCTATGTCGAGAACAGATAAAGAA-A 1027
|| ||||||||| || || |||||| | | || || || |||||||||||| |
Sbjct 1512 TCA-TCATATCCACAACTTGATTCAACTGTACTTACTGCGTTGAAAACAGATAAAGATTA 1570
Query 1028 GTTCTTATCAAAACGAAGTATTCCAACTATCGGAGAACCACGGAAATAAAGACATAAAAG 1087
|||| || ||| || || ||||||| ||| |||| ||| |||| || | | ||||
Sbjct 1571 -TTCTCGTCGAAATGAGGTTTTCCAACCATCTGAGAGCCAAGGAAGTATATTTGTGAAAG 1629
Query 1088 AGACTGACCGTATGCTGG-GGAGGAACTGCGAGTCTAGTCGATTTG-ATGCTTTGA-TGT 1144
| || || | || || || ||| || | ||||| |||| | ||| ||||||| | ||
Sbjct 1630 ATACAGAACATAGGCAGGAGGAAAAAA-GTGAGTCAAGTC-AGTTGGATGCTTTAACTG- 1686
Query 1145 CATCTG-GT-TATACTTTTGGTGGCAGCGAGCTACTAGAGGCGTTAGG-CTCTGCTTTCA 1201
||||| || | | ||||| |||||| ||||| ||||||| ||||| | | || ||||
Sbjct 1687 CATCTTTGTGT-T-CTTTTTCTGGCAGTGAGCTGTTAGAGGCATTAGGGC-CAGCGTTCA 1743
Query 1202 AGCAAG-CGAGCACTGGTCA-GGAGGAGCTA-CTGAAGTCTGAA-CATGGTTCAACAATG 1257
| || | ||||||| | | || ||||||| | |||| |||| | || | || | ||
Sbjct 1744 -GTAAAACAAGCACTGATTATGG-GGAGCTAGCA-AAGTTTGAATC-TGCTGCAGCTATA 1799
Query 1258 AGACCAACAGATGATATGAGTCATAGCCAGCTGACATTTGACTCTGGC-CCTGAGAATCT 1316
|||| |||| |||||||||| ||||| || ||||||||||| || || || ||||||||
Sbjct 1800 AGACGAACAAATGATATGAGCCATAGTCACCTGACATTTGAATCCAGCTCC-GAGAATCT 1858
Query 1317 TCTAGATGCTGTGGTTGCTAATGTGTGTCAAAGC-GATGGTAAT-TCCAGG-GATGATAT 1373
||||||||| || ||||||| | || || || | ||||||||| || ||| | ||| ||
Sbjct 1859 TCTAGATGCCGTTGTTGCTAGTATGAGT-AATGGTGATGGTAATGTC-AGGCG-TGAAAT 1915
Query 1374 GT-TGTCGAGCAGATCGGTACAATCATTGCTTACCA--GC--A--TGGAACTTGCAGAAC 1426
| | || ||||| || ||| ||||||||||| | || | ||| || |||||||
Sbjct 1916 ATCT-TCAAGCAGGTCAACACAGTCATTGCTTACAACTGCTGAAATGGCACAGGCAGAAC 1974
Query 1427 CCTCAGGTCAAAAGAAGCATAATATTGTTTACC-CAATTGATAGTGCT-ATGAATCAGCT 1484
| | ||||| || ||||| ||||||||| | | || ||||||||| | || | ||||
Sbjct 1975 CTTTTGGTCATAATAAGCAAAATATTGTT-AGCACAGTTGATAGTG-TGATTAGCCAGCC 2032
Query 1485 ACCACTTGCAGAGGTGGAT-ATCCAACAAAATTCATCAGATATCTGTGGAGCATTTTCTT 1543
|| || ||||| | || | |||||||| ||| ||||| ||||||| |||||||||||||
Sbjct 2033 GCCTCTAGCAGATG-GGCTTATCCAACAGAATCCATCAAATATCTGCGGAGCATTTTCTT 2091
Query 1544 CGATTGGGTTCTCATCTACGTATCCCAGCTCCTCTAGTGATCAGTTTCAGACATCCCTGG 1603
| |||||||| ||||| || | || ||| || || || || ||||||| ||| |||||||
Sbjct 2092 CCATTGGGTTTTCATCAACATGTCTCAGTTCATCCAGCGACCAGTTTCCGACGTCCCTGG 2151
Query 1604 ACATGCCCAAGAAGAACAAAAAGAGGGCCAAGCCTGGTGAAAGTTCTCGACCTCGCCCAA 1663
| || |||||||||||||||||||| || || ||||||||||||||||| ||||| ||||
Sbjct 2152 AAATTCCCAAGAAGAACAAAAAGAGAGCTAAACCTGGTGAAAGTTCTCGGCCTCGTCCAA 2211
Query 1664 GAGACAGACAACTCATTCAGGATCGAATCAAGGAACTTAGAGAACTTGTACCTAATGGAG 1723
| ||||| ||||| ||||||||||| ||||| ||||| || || ||||| |||||||||
Sbjct 2212 GGGACAGGCAACTTATTCAGGATCGTATCAAAGAACTAAGGGAGCTTGTGCCTAATGGAT 2271
Query 1724 CTAAGTGCAGTATTGATTCTTTGCTCGAACGCACGATCAAGCACATGCTCTTTTTGCAGA 1783
||||||||||||||||||| ||||| || |||||||||||||||||||||| ||||||
Sbjct 2272 CTAAGTGCAGTATTGATTCCTTGCTAGAGTGCACGATCAAGCACATGCTCTTCCTGCAGA 2331
Query 1784 ATGT-TACTAAGCATGCTGACAAGCTCAGTAAAAGTGCTAA-TGCAAAGATGCAACAAAA 1841
||| | || |||||||||||||||||| ||||||||| || | ||||||||||||| ||
Sbjct 2332 GTGTCT-CTCAGCATGCTGACAAGCTCACTAAAAGTGC-AAGTTCAAAGATGCAACACAA 2389
Query 1842 GGA-A-----AC--T-GG--TAT---GCA---A----GGTTCAAGCTGCGCAGTGGAGGT 1880
||| | || | || ||| ||| | ||||| ||||| ||||||||| |
Sbjct 2390 GGATACCGGCACCCTAGGAATATCAAGCACTGAACAAGGTTCGAGCTGGGCAGTGGAGAT 2449
Query 1881 TGGAGGCCATCTTCAAGTATGCTCGATCATCGTGGAGAATCTGAACAA-GCAGGGGATGG 1939
|||||||||||| ||||| ||||| ||||| |||||||||||| |||| | ||| | ||
Sbjct 2450 TGGAGGCCATCTGCAAGTGTGCTCAATCATGGTGGAGAATCTGGACAAAGAAGGAG-TGA 2508
Query 1940 TGCTCATCGAGATGTTATGTGAAGAATGTAGCCATTTTCTTGAGATAGCAAACGTGATTA 1999
|||| || |||||| |||| |||||||||||||| ||||| |||||||| |||||||| |
Sbjct 2509 TGCTTATTGAGATGCTATGCGAAGAATGTAGCCACTTTCTCGAGATAGCGAACGTGATAA 2568
Query 2000 GGAGCTTAGACCTCATCATCTTAAGAGGAATCACCGAGACTCAGGGCGAGAAAACATGGA 2059
||||||| || ||||||||| | ||||| | ||| |||| || ||||||||||||||||
Sbjct 2569 GGAGCTTGGAACTCATCATCCTCAGAGGCACCACTGAGAAACAAGGCGAGAAAACATGGA 2628
Query 2060 TATGCTTTGTAACTG-AGAGCCAAAACAGCAAAGTAATGCAGAGGATGGACATTTTGTGG 2118
|||| |||||| || || | ||||||| |||||||||||| ||||||||||| |||||
Sbjct 2629 TATGTTTTGTAG-TGGAGGGACAAAACAACAAAGTAATGCACAGGATGGACATCCTGTGG 2687
Query 2119 TCTCTGGTGCAAATATTTCAACCAAAGGC 2147
||||| ||||||||||||||||| |||||
Sbjct 2688 TCTCTTGTGCAAATATTTCAACCCAAGGC 2716
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 107278564665
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5