BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg901436
Length=1338
Score E
Sequences producing significant alignments: (Bits) Value
AT2G35860.1 | Symbols: FLA16 | FASCICLIN-like arabinogalactan p... 2106 0.0
AT2G35859.1 | Symbols: | Potential natural antisense gene, loc... 1943 0.0
AT3G52370.1 | Symbols: FLA15 | FASCICLIN-like arabinogalactan p... 1022 0.0
> AT2G35860.1 | Symbols: FLA16 | FASCICLIN-like arabinogalactan
protein 16 precursor | chr2:15059763-15062122 FORWARD LENGTH=1746
Length=1746
Score = 2106 bits (1140), Expect = 0.0
Identities = 1274/1340 (95%), Gaps = 4/1340 (0%)
Strand=Plus/Plus
Query 1 ATGGATTCCTCCTATGGCGTAACAAAGctcctcctcctcctcctcctcACCACCTCCATT 60
||||||||||||||||||| |||||| |||| ||||||||| |||||||||||||||||
Sbjct 97 ATGGATTCCTCCTATGGCGCCACAAAGTTCCTTCTCCTCCTCTTCCTCACCACCTCCATT 156
Query 61 GCCACCGCATTACCCGATAACAAACCCGTACCGGGTCAAATAAACTCAAACTCAGTCCTC 120
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 157 GCGACCGCATTACCCGATAACAAACCAGTACCGGGTCAAATAAACTCAAACTCAGTCCTC 216
Query 121 GTAGCTCTCCTTGACTCTCACTACACAGAGCTAGCTGAACTAGTCGAGAAAGCCCTCCTT 180
||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 217 GTAGCTCTCCTGGACTCTCACTACACAGAGCTAGCAGAACTAGTCGAAAAAGCTCTCCTT 276
Query 181 CTCCAAACCCTCGAAGAAGCAGTTGGTAAACACAACATCACAATCTTTGCACCACGCAAC 240
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 277 CTCCAGACCCTCGAAGAAGCAGTTGGTAAACACAACATCACAATCTTCGCACCACGCAAC 336
Query 241 GATGCCTTAGAACGAAACTTAGACCCACTCTTCAAATCTTTCTTGCTTGAACCAAGAAAC 300
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 337 GATGCCTTGGAACGAAACTTAGACCCACTCTTCAAATCTTTCTTGCTCGAACCAAGAAAC 396
Query 301 CTCAAATCTCTACAATCTTTATTAATGTTTCACATTCTACCTAAACGAATCTCTTCTCCT 360
||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||||
Sbjct 397 CTCAAATCTTTACAATCTTTATTAATGTTCCACATTCTTCCTAAACGAATCACTTCTCCT 456
Query 361 CAATGGCCTTCTCTTTCTCACCACCACCGTACTCTCTCCAACGACCATCTCCACCTCACC 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 457 CAATGGCCTTCTCTTTCTCATCACCACCGTACTCTCTCCAACGACCATCTCCACCTCACC 516
Query 421 GTCGACGTCAACACT-TTAAAAGTAGATTCCGCTGAGATTATCCGACCCGATGACGTCAT 479
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 517 GTCGACGTCAACACTCTT-AAAGTAGATTCCGCTGAGATTATCCGACCCGATGACGTCAT 575
Query 480 TAGACCCGATGGTATCATTCACGGCATCGAACGTCTTCTCATCCCCCGCTCTGTTCAGGA 539
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 576 TAGACCCGATGGTATCATTCACGGCATCGAACGTCTTCTCATCCCTCGCTCTGTTCAAGA 635
Query 540 AGATTTCAACCGCCGTCGTAGTCTCCGCTCAATCTCCGCCGTTATACCAGAAGGAGCTCC 599
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 636 AGATTTTAACCGCCGTCGTAGTCTCCGTTCAATCTCCGCCGTTATACCAGAAGGAGCTCC 695
Query 600 TGAAGTTGACCCAAGAACTCACCGTCTCAAGAAACCAGCCCCCGCCGTCCCCGCCGGAGC 659
||| |||||||| |||||||||||||||||||||||| | |||||||| |||||||||||
Sbjct 696 TGAGGTTGACCCTAGAACTCACCGTCTCAAGAAACCATCTCCCGCCGTTCCCGCCGGAGC 755
Query 660 TCCACCGGTTCTTCCAATCTACGACGCTATGTCACCAGGTCCTTCCCTAGCCCCGGCTCC 719
||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 756 TCCTCCGGTTCTTCCAATCTACGACGCTATGTCACCAGGTCCTTCCCTAGCTCCTGCTCC 815
Query 720 AGCTCCCGGACCTGGTGGTCCACGTGGCCATTTCAACGGCGAGGCTCAAGTTAAAGATTT 779
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 816 AGCTCCCGGACCCGGTGGTCCACGTGGCCATTTCAACGGCGATGCTCAAGTTAAAGATTT 875
Query 780 CATCCACACTCTCTTGCATTACGGTGGCTACAACGAGATGGCTGATATACTCGTCAATTT 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 876 CATCCACACTCTCTTGCATTACGGTGGCTACAACGAGATGGCTGATATACTCGTCAACTT 935
Query 840 AACATCTTTAGCCACTGAGATGGGTCGTCTTGTCTCTGAAGGCTACGTTTTAACCGTTCT 899
||| ||||||||||||||||||||||| || || || |||||||||||||||||||||||
Sbjct 936 AACCTCTTTAGCCACTGAGATGGGTCGACTCGTGTCAGAAGGCTACGTTTTAACCGTTCT 995
Query 900 AGCTCCTAACGACGAAGCCATGGCTAAGCTCACAACGGACCAGCTTAGCGAGCCAGGTGC 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 996 TGCTCCTAACGACGAAGCCATGGCTAAGCTCACAACGGACCAGCTTAGCGAGCCAGGTGC 1055
Query 960 TCCTGAACAGATTATGTATTACCACATCATACCGGAGTATCAAACAGAGGAGAGTATGTA 1019
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1056 TCCTGAACAAATTATGTATTACCACATCATACCGGAGTATCAAACAGAGGAGAGTATGTA 1115
Query 1020 CAACGCTGTTCGGAGATTTGGGAAAGTGAAGTACGATTCTTTGAGGTTTCCACACAAAGT 1079
|||||||||||||||||| || ||||||||||| ||||| ||||| || ||||| |||||
Sbjct 1116 CAACGCTGTTCGGAGATTCGGAAAAGTGAAGTATGATTCATTGAGATTCCCACATAAAGT 1175
Query 1080 GTTAGCTCAAGAAGCTGATGGATCTGTCAAATTCGGACACGGTGATGGCTCAGCTTACTT 1139
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1176 GTTGGCTCAAGAAGCTGATGGATCTGTCAAATTCGGACACGGTGATGGTTCAGCTTACTT 1235
Query 1140 ATTTGATCCTGATATTTACACCGACGGTCGGATTTCAGTTCAGGGTATTGACGGAGTCTT 1199
|||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 1236 GTTTGATCCTGATATCTACACGGACGGTCGGATTTCAGTTCAGGGTATTGATGGAGTCTT 1295
Query 1200 GTTCCCGGCAG-AGGAAACGCCAGCGACAGAGATTAAACCCGCGGCTCCGGTCGTTAAGA 1258
||||||| || |||||||||| ||||| ||||||||||| || ||||||||||||||||
Sbjct 1296 GTTCCCGA-AGGAGGAAACGCCGGCGACGGAGATTAAACCAGCTGCTCCGGTCGTTAAGA 1354
Query 1259 AAGTTGCTAAATCAAGAAGAGGTAAATTGATGGAGGTAGCTTGTAGAATGATGGGTTCAC 1318
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1355 AAGTTTCTAAATCAAGAAGAGGTAAATTGATGGAGGTAGCTTGTAGAATGATGGGGTCAC 1414
Query 1319 GGTTTATTCCGTGTCAGTGA 1338
||||||||||||||||||||
Sbjct 1415 GGTTTATTCCGTGTCAGTGA 1434
> AT2G35859.1 | Symbols: | Potential natural antisense gene, locus
overlaps with AT2G35860 | chr2:15059337-15061100 REVERSE
LENGTH=1764
Length=1764
Score = 1943 bits (1052), Expect = 0.0
Identities = 1178/1240 (95%), Gaps = 4/1240 (0%)
Strand=Plus/Minus
Query 1 ATGGATTCCTCCTATGGCGTAACAAAGctcctcctcctcctcctcctcACCACCTCCATT 60
||||||||||||||||||| |||||| |||| ||||||||| |||||||||||||||||
Sbjct 1242 ATGGATTCCTCCTATGGCGCCACAAAGTTCCTTCTCCTCCTCTTCCTCACCACCTCCATT 1183
Query 61 GCCACCGCATTACCCGATAACAAACCCGTACCGGGTCAAATAAACTCAAACTCAGTCCTC 120
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1182 GCGACCGCATTACCCGATAACAAACCAGTACCGGGTCAAATAAACTCAAACTCAGTCCTC 1123
Query 121 GTAGCTCTCCTTGACTCTCACTACACAGAGCTAGCTGAACTAGTCGAGAAAGCCCTCCTT 180
||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||||
Sbjct 1122 GTAGCTCTCCTGGACTCTCACTACACAGAGCTAGCAGAACTAGTCGAAAAAGCTCTCCTT 1063
Query 181 CTCCAAACCCTCGAAGAAGCAGTTGGTAAACACAACATCACAATCTTTGCACCACGCAAC 240
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1062 CTCCAGACCCTCGAAGAAGCAGTTGGTAAACACAACATCACAATCTTCGCACCACGCAAC 1003
Query 241 GATGCCTTAGAACGAAACTTAGACCCACTCTTCAAATCTTTCTTGCTTGAACCAAGAAAC 300
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1002 GATGCCTTGGAACGAAACTTAGACCCACTCTTCAAATCTTTCTTGCTCGAACCAAGAAAC 943
Query 301 CTCAAATCTCTACAATCTTTATTAATGTTTCACATTCTACCTAAACGAATCTCTTCTCCT 360
||||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||||
Sbjct 942 CTCAAATCTTTACAATCTTTATTAATGTTCCACATTCTTCCTAAACGAATCACTTCTCCT 883
Query 361 CAATGGCCTTCTCTTTCTCACCACCACCGTACTCTCTCCAACGACCATCTCCACCTCACC 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 882 CAATGGCCTTCTCTTTCTCATCACCACCGTACTCTCTCCAACGACCATCTCCACCTCACC 823
Query 421 GTCGACGTCAACACT-TTAAAAGTAGATTCCGCTGAGATTATCCGACCCGATGACGTCAT 479
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 822 GTCGACGTCAACACTCTT-AAAGTAGATTCCGCTGAGATTATCCGACCCGATGACGTCAT 764
Query 480 TAGACCCGATGGTATCATTCACGGCATCGAACGTCTTCTCATCCCCCGCTCTGTTCAGGA 539
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 763 TAGACCCGATGGTATCATTCACGGCATCGAACGTCTTCTCATCCCTCGCTCTGTTCAAGA 704
Query 540 AGATTTCAACCGCCGTCGTAGTCTCCGCTCAATCTCCGCCGTTATACCAGAAGGAGCTCC 599
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 703 AGATTTTAACCGCCGTCGTAGTCTCCGTTCAATCTCCGCCGTTATACCAGAAGGAGCTCC 644
Query 600 TGAAGTTGACCCAAGAACTCACCGTCTCAAGAAACCAGCCCCCGCCGTCCCCGCCGGAGC 659
||| |||||||| |||||||||||||||||||||||| | |||||||| |||||||||||
Sbjct 643 TGAGGTTGACCCTAGAACTCACCGTCTCAAGAAACCATCTCCCGCCGTTCCCGCCGGAGC 584
Query 660 TCCACCGGTTCTTCCAATCTACGACGCTATGTCACCAGGTCCTTCCCTAGCCCCGGCTCC 719
||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 583 TCCTCCGGTTCTTCCAATCTACGACGCTATGTCACCAGGTCCTTCCCTAGCTCCTGCTCC 524
Query 720 AGCTCCCGGACCTGGTGGTCCACGTGGCCATTTCAACGGCGAGGCTCAAGTTAAAGATTT 779
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 523 AGCTCCCGGACCCGGTGGTCCACGTGGCCATTTCAACGGCGATGCTCAAGTTAAAGATTT 464
Query 780 CATCCACACTCTCTTGCATTACGGTGGCTACAACGAGATGGCTGATATACTCGTCAATTT 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 463 CATCCACACTCTCTTGCATTACGGTGGCTACAACGAGATGGCTGATATACTCGTCAACTT 404
Query 840 AACATCTTTAGCCACTGAGATGGGTCGTCTTGTCTCTGAAGGCTACGTTTTAACCGTTCT 899
||| ||||||||||||||||||||||| || || || |||||||||||||||||||||||
Sbjct 403 AACCTCTTTAGCCACTGAGATGGGTCGACTCGTGTCAGAAGGCTACGTTTTAACCGTTCT 344
Query 900 AGCTCCTAACGACGAAGCCATGGCTAAGCTCACAACGGACCAGCTTAGCGAGCCAGGTGC 959
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 343 TGCTCCTAACGACGAAGCCATGGCTAAGCTCACAACGGACCAGCTTAGCGAGCCAGGTGC 284
Query 960 TCCTGAACAGATTATGTATTACCACATCATACCGGAGTATCAAACAGAGGAGAGTATGTA 1019
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 283 TCCTGAACAAATTATGTATTACCACATCATACCGGAGTATCAAACAGAGGAGAGTATGTA 224
Query 1020 CAACGCTGTTCGGAGATTTGGGAAAGTGAAGTACGATTCTTTGAGGTTTCCACACAAAGT 1079
|||||||||||||||||| || ||||||||||| ||||| ||||| || ||||| |||||
Sbjct 223 CAACGCTGTTCGGAGATTCGGAAAAGTGAAGTATGATTCATTGAGATTCCCACATAAAGT 164
Query 1080 GTTAGCTCAAGAAGCTGATGGATCTGTCAAATTCGGACACGGTGATGGCTCAGCTTACTT 1139
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 163 GTTGGCTCAAGAAGCTGATGGATCTGTCAAATTCGGACACGGTGATGGTTCAGCTTACTT 104
Query 1140 ATTTGATCCTGATATTTACACCGACGGTCGGATTTCAGTTCAGGGTATTGACGGAGTCTT 1199
|||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 103 GTTTGATCCTGATATCTACACGGACGGTCGGATTTCAGTTCAGGGTATTGATGGAGTCTT 44
Query 1200 GTTCCCGGCAG-AGGAAACGCCAGCGACAGAGATTAAACC 1238
||||||| || |||||||||| ||||| |||||||||||
Sbjct 43 GTTCCCGA-AGGAGGAAACGCCGGCGACGGAGATTAAACC 5
> AT3G52370.1 | Symbols: FLA15 | FASCICLIN-like arabinogalactan
protein 15 precursor | chr3:19417490-19419782 FORWARD LENGTH=1603
Length=1603
Score = 1022 bits (553), Expect = 0.0
Identities = 1066/1310 (81%), Gaps = 50/1310 (4%)
Strand=Plus/Plus
Query 25 AAGctcctcctcctcctcctcctcACCACCTCCATTGCCACCGCATTACCCGATAACAAA 84
||||| ||| || ||||||||||||| | ||||||| ||||||||||||||||| |||
Sbjct 75 AAGCTTCTCTTCTTCCTCCTCCTCACTATCTCCATTACCACCGCATTACCCGAT---AAA 131
Query 85 CCCGTACCGGGTCAAATAAACTCAAACTCAGTCCTCGTAGCTCTCCTTGACTCTCACTAC 144
|||| |||||||||||||||||||||| |||||||| ||||| |||||||| ||||||
Sbjct 132 CCCGGGTCGGGTCAAATAAACTCAAACTCCGTCCTCGTTGCTCTTCTTGACTCACACTAC 191
Query 145 ACAGAGCTAGCTGAACTAGTCGAGAAAGCCCTCCTTCTCCAAACCCTCGAAGAAGCAGTT 204
||||| ||||| || || ||||| ||||| || |||||||||||| | |||||||| |||
Sbjct 192 ACAGAACTAGCAGAGCTCGTCGAAAAAGCTCTTCTTCTCCAAACCTTAGAAGAAGCTGTT 251
Query 205 GGTAAACACAACATCACAATCTTTGCACCACGCAACGATGCCTTAGAACGAAA-CTTAGA 263
||| |||||||||||||||||||||| || || ||||||||||||||| ||| ||| ||
Sbjct 252 GGTCAACACAACATCACAATCTTTGCTCCTCGTAACGATGCCTTAGAAAAAAATCTT-GA 310
Query 264 CCCACTCTTCAAATCTTTCTTGCTTGAACC-AAGAAACCTCAAATC-TCTACAATCTTTA 321
|| |||||||||||||| || |||| || |||||||||||| | |||||||||||
Sbjct 311 TCCTGAATTCAAATCTTTCTTACTCCAACCGAA-AAACCTCAAATCAT-TACAATCTTTA 368
Query 322 TTAATGTTTCACATTCTACCTAAACGAATCTCTTCTCCTCAA-TGGCCTTCTCTTTC-TC 379
||||||||||||||||| || ||| ||||| ||||||| ||| | ||| | | || |
Sbjct 369 TTAATGTTTCACATTCTTCCCAAAAGAATCACTTCTCCACAATTCTCCTCCGCCGTCGTT 428
Query 380 ACCACCACCGTACTCTCTCCAACGACCATCTCCACCTCACCGTCGACGTCAACACTTTAA 439
| |||||||||||||||||||||||| ||||| | || || | | || ||
Sbjct 429 A--GCCACCGTACTCTCTCCAACGACCACCTCCA--T----TTC-AC--C-A-AC-GGAA 474
Query 440 AAGT-AGATTCCGCTGAGATTATCC-GACCCGATGACGTCATTAGACCCGATGGTATCAT 497
|||| | | |||||||| | || || ||||||||| | | | | |||||||| |||||
Sbjct 475 AAGTCA-ACTCCGCTGA-AATAACCAAACCCGATGATTTAACTCGTCCCGATGGAATCAT 532
Query 498 TCACGGCATCGAACGTCTTCTCATCCCCCGCTCTGTTCAGGAAGATTTCAACCGCCGTCG 557
||||| |||||||||||| | ||||| || |||||||| ||||||||||||||||||||
Sbjct 533 CCACGGAATCGAACGTCTTTTAATCCCACGTTCTGTTCAAGAAGATTTCAACCGCCGTCG 592
Query 558 TAGTCTCCGCTCAATCTCCGCCGTTAT-ACCAGAAGGAGCTCCTGAAGTTGACCCAAGAA 616
||||||||| |||||| | ||||| || ||| |||||||| || || ||||| |||||||
Sbjct 593 TAGTCTCCGTTCAATCGCTGCCGT-ATTACCGGAAGGAGCACCGGAGGTTGATCCAAGAA 651
Query 617 CTCACCGTCTCAAGAAACCAGCCCCCGCCG-TCCCCGCCGGAGCTCCACCGGTTCTTCCA 675
||||||||||||||||| |||| | || | ||||||||||||||||||||||||||
Sbjct 652 CTCACCGTCTCAAGAAAA-AGCCAGCACCAATTCCCGCCGGAGCTCCACCGGTTCTTCCG 710
Query 676 ATCTACGACGCTATGTCACCAGGTCCTTCCCTAGCCCCGGCTCCAGCTCCCGGACCTGGT 735
| |||||||| |||||||| ||||| || ||||| |||||||| || || ||||| |||
Sbjct 711 GTTTACGACGCAATGTCACCTGGTCCGTCACTAGCTCCGGCTCCGGCACCAGGACCGGGT 770
Query 736 GGTCCACGTGGCCATTTCAACGGCGAGGCTCAAGTTAAAGATTTCATCCACACTCT-CTT 794
|| ||||| |||||||||||| |||||||||||||||||||| |||||||| || |||
Sbjct 771 GGGCCACGCCACCATTTCAACGGAGAGGCTCAAGTTAAAGATTTTATCCACACGCTTCTT 830
Query 795 GCATTACGGTGGCTACAACGAGATGGCTGATATACTCGTCAATTTAACATCTTTAGCCAC 854
||||||||||||||||| || ||||| ||||| ||||| ||| | || |||||||||||
Sbjct 831 -CATTACGGTGGCTACAATGAAATGGCAGATATTCTCGTTAATCTCACTTCTTTAGCCAC 889
Query 855 TGAGATGGGTCGTCTTGTCTCTGAAGGCTACGTTTTAACCGTTCTAGCTCCTAACGACGA 914
||||||||||| || || || ||||| ||||||||||||||| |||| || ||||||||
Sbjct 890 CGAGATGGGTCGGCTCGTGTCGGAAGGTTACGTTTTAACCGTTTTAGCACCAAACGACGA 949
Query 915 AGCCATGGCTAAGCTCACAACGGACCAGCTT-AGCGAGCCAGGTGCTCCTGAACAGATTA 973
||| |||||||| | || |||||||| || ||||| || || ||||| || || ||||
Sbjct 950 AGCTATGGCTAAATTGACCACGGACCAA-TTGAGCGAACCGGGAGCTCCAGAGCAAATTA 1008
Query 974 TGTATTACCACATCATACCGGAGTATCAAACAGAGGAGAGTATGTACAACGCTGTTCGGA 1033
||||||| |||||||||||||| || ||||| || |||||||||||||| |||| ||
Sbjct 1009 TGTATTATCACATCATACCGGAATACCAAACCGAAGAGAGTATGTACAATTCTGTACGCC 1068
Query 1034 GATTTGGGAAAGTGAAGTACGATTCTTTGAGGTTTCCACACAAAGT-GTTAG-CTCAAGA 1091
| ||||||||| | ||||||||| | ||||||| || ||||| | || |||| ||
Sbjct 1069 GGTTTGGGAAAATCCGGTACGATTCACTCCGGTTTCCTCATAAAGTAG--AGGCTCAGGA 1126
Query 1092 AGCTGATGGATCTGTCAAATTCGGACACGGTGATGGCTCAGCTTACTTATTTGATCCTGA 1151
|| ||||| || || || ||||| || |||||||| || ||||| || || ||||||||
Sbjct 1127 GGCAGATGGTTCGGTTAAGTTCGGTCATGGTGATGGTTCGGCTTATTTGTTCGATCCTGA 1186
Query 1152 TATTTACACCGACGGTCGGATTTCAGTTCA-GGGTATTGACGGAGTCTTGTTCCCGGCAG 1210
|||||| ||||| || |||||||| ||||| ||| |||||||| || |||||||||| ||
Sbjct 1187 TATTTATACCGATGGACGGATTTCGGTTCAAGGG-ATTGACGGTGTTTTGTTCCCGG-AG 1244
Query 1211 -AGGAAACGCCAG-CGACAGAGATTAAACCCGCGGCTCCGGTCGTTAAGAAAGTTGCTAA 1268
| |||| || | ||| | ||| ||||| ||| ||| || || ||||||| ||||
Sbjct 1245 GAAAAAACTCCGGTCGAGA-AGA--AAACCGGCGT-TCCAGTTGTCAAGAAAGCACCTAA 1300
Query 1269 ATCAAGAAGAGGTAAATTGATGGAGGTAGCTTGTAGAATGATGGGTTCAC 1318
| |||||||||||||||||||||| ||||| |||| |||| |||| ||||
Sbjct 1301 ACCAAGAAGAGGTAAATTGATGGAAGTAGCATGTACAATGCTGGGATCAC 1350
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65863115040
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5