BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg903463
Length=3393
Score E
Sequences producing significant alignments: (Bits) Value
AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3... 4571 0.0
AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:649877... 2326 0.0
> AT3G06010.1 | Symbols: ATCHR12 | Homeotic gene regulator | chr3:1802228-1807478
REVERSE LENGTH=3710
Length=3710
Score = 4571 bits (2475), Expect = 0.0
Identities = 2620/2690 (97%), Gaps = 9/2690 (0%)
Strand=Plus/Plus
Query 710 AGAGGTTATCACGTTTAGAAGAAGAGGAGAAGAATCTGATTGAAACCGCCAAGAGGAAAT 769
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 817 AGAGGTTATCACGTTTAGAAGAAGAGGAGAAGAATCTGATTGAAACTGCCAAGAGGAAAT 876
Query 770 TCTTTGCAGAAGTACTTAATGCAGTTCGTGAATTCCAGTTGCAAATTCAGGCGACTCAAA 829
|||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 877 TCTTTGCAGAAGTACTCAATGCAGTACGTGAATTCCAGTTGCAAATTCAGGCGACTCAAA 936
Query 830 AACGCCGTAGGCAAAGGAATGATGGTGTGCAGGCTTGGCATGGGAGACAAAGACAACGTG 889
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 937 AACGCCGTAGGCAAAGGAATGATGGTGTGCAGGCTTGGCATGGGAGACAAAGACAACGCG 996
Query 890 CTACCCGTGCTGAAAAGTTGAGGCTCATGGCCCTTAAGTCTGATGATCAAGAGGCATACA 949
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 997 CTACCCGTGCTGAAAAGTTGAGGCTCATGGCCCTTAAGTCCGATGATCAAGAGGCATACA 1056
Query 950 TGAAACTAGTAAAGGAGAGTAAAAATGAAAGACTAACCACTCTTTTAGAGGAGACAAACA 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1057 TGAAACTAGTAAAGGAGAGTAAAAATGAAAGACTAACCACTCTTTTAGAGGAGACAAACA 1116
Query 1010 AACTCCTTGCTAATTTGGGAGCTGCTGTTCAACGTCAGAAAGATGCTAAACTTCCGGAAG 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1117 AACTCCTTGCTAATTTGGGAGCTGCTGTTCAACGTCAGAAAGATGCTAAACTTCCGGAAG 1176
Query 1070 GCATTGATCTTCTTAAAGACTCAGAATCTGACTTGTCTGAACTTGATGGTCCAAGAAGTG 1129
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1177 GCATTGATCTACTTAAAGACTCAGAATCTGACTTGTCTGAACTTGATGCTCCAAGAAGTG 1236
Query 1130 AACCATTGCAGGATCTGCTTCCTGATCAGGATATTGATATTACTGAGTCTGACAATAACG 1189
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1237 AACCATTGCAGGATCTGCTTCCTGATCAGGATATAGATATTACTGAGTCTGACAATAACG 1296
Query 1190 ATGACTCTAATGATTTACTAGAAGGACAGAGGCAGTATAACTCTGCTATCCATTCAATAC 1249
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1297 ATGACTCTAATGATTTACTAGAAGGACAGAGGCAGTATAACTCGGCTATCCATTCAATAC 1356
Query 1250 AAGAGAAGGTGACGGAGCAGCCCTCACTTCTAGAAGGTGGGGAACTACGATCCTATCAAT 1309
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1357 AAGAGAAGGTGACGGAGCAGCCCTCGCTTCTAGAAGGTGGGGAACTACGATCCTATCAAT 1416
Query 1310 TAGAAGGGCTCCAATGGATGGTTTCTCTATTCAACAATAACCTCAATGGAATTTTAGCTG 1369
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1417 TAGAAGGGCTTCAATGGATGGTTTCTCTATTCAACAATAACCTCAATGGAATATTAGCTG 1476
Query 1370 ACGAGATGGGTTTGGGAAAAACTATTCAAACTATTTCTCTGATTGCGTATCTTCTGGAGA 1429
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1477 ATGAGATGGGTTTGGGAAAAACTATTCAAACAATTTCTCTGATTGCGTATCTTCTGGAGA 1536
Query 1430 ATAAAGGTGTGCCTGGGCCTTATCTTATAGTTGCTCCAAAAGCTGTGCTACCAAATTGGG 1489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1537 ATAAAGGTGTGCCTGGGCCTTATCTTATAGTTGCTCCAAAAGCTGTGCTACCAAATTGGG 1596
Query 1490 TAAACGAGTTTGCAACATGGGTACCAAGCATTGCAGCTTTTCTTTATGATGGACGTTTAG 1549
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1597 TAAACGAGTTTGCAACATGGGTACCAAGCATTGCAGCTTTTCTGTATGATGGACGTTTAG 1656
Query 1550 AGGAAAGAAAAGCAATAAGGGAAAAAATTGCAGGAGAAGGAAAATTTAATGTGTTGATAA 1609
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1657 AGGAAAGGAAAGCAATAAGGGAAAAAATTGCAGGAGAAGGAAAATTTAATGTGTTGATAA 1716
Query 1610 CCCATTATGATCTTATCATGAGAGATAAAGCATTTTTGAAGAAAATTGAGTGGTACTACA 1669
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1717 CCCATTATGATCTTATCATGAGAGATAAAGCATTTTTAAAGAAAATTGAGTGGTACTACA 1776
Query 1670 TGATTGTTGATGAAGGACATCGGCTGAAGAACCATGAATCTGCTCTAGCAAAGACTCTAG 1729
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 1777 TGATTGTTGATGAAGGACATCGGCTGAAGAACCACGAATCTGCTCTAGCAAAGACTTTAT 1836
Query 1730 TAACAGGCTATCGTATAAAACGCAGACTTCTGTTAACCGGGACACCCATACAGAATAGCC 1789
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1837 TAACAGGCTATCGTATAAAACGCAGACTTCTGTTGACCGGGACACCCATACAGAATAGCC 1896
Query 1790 TTCAAGAACTATGGTCATTGCTTAATTTTCTCCTTCCTCACATCTTTAACTCAGTTCAAA 1849
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1897 TTCAAGAACTATGGTCATTGCTTAATTTTCTCCTTCCTCACATCTTTAACTCGGTTCAGA 1956
Query 1850 ACTTCGAGGAATGGTTTAATGCGCCTTTCGCTGACCGTGGTAATGTCAGTCTTACGGATG 1909
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1957 ACTTCGAGGAATGGTTTAATGCTCCTTTCGCTGACCGTGGTAATGTCAGTCTCACGGATG 2016
Query 1910 AAGAGGAGCTCTTGATTATCCACCGTCTGCATCATGTTATAAGGCCGTTTATACTGAGAA 1969
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 2017 AAGAGGAGCTCTTGATTATTCACCGCCTGCATCATGTTATAAGGCCGTTTATACTGAGAA 2076
Query 1970 GAAAAAAGGACGAAGTAGAGAAATTCCTTCCTGGAAAGACACAGGTCATATTGAAGTGTG 2029
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2077 GGAAAAAGGACGAAGTAGAGAAATTCCTTCCTGGAAAGACACAGGTCATATTGAAGTGTG 2136
Query 2030 ATATGTCGGCATGGCAGAAAGTGTATTACAAACAAGTTACAGACATGGGCAGGGTTGGCC 2089
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2137 ATATGTCGGCGTGGCAGAAAGTGTATTACAAACAAGTTACAGACATGGGCAGGGTTGGCC 2196
Query 2090 TTCAAACAGGATCTGGGAAATCAAAGAGTCTGCAAAATCTAACGATGCAATTAAGAAAGT 2149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2197 TTCAAACAGGATCTGGGAAATCAAAGAGTCTGCAAAATCTAACGATGCAATTAAGAAAGT 2256
Query 2150 GTTGTAACCATCCCTATCTATTTGTTGGAGGAGACTACAATATGTGGAAGAAACCTGAGA 2209
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2257 GTTGTAACCATCCTTATCTATTTGTTGGAGGAGACTACAATATGTGGAAGAAACCTGAGA 2316
Query 2210 TTGTGAGAGCTTCAGGGAAATTTGAACTCCTTGATCGTCTCCTTCCAAAACTGCGCAAGG 2269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2317 TTGTGAGAGCTTCAGGGAAATTTGAACTCCTTGATCGTCTCCTTCCAAAACTGCGCAAGG 2376
Query 2270 CTGGACATAGGATTCTTCTCTTCTCCCAAATGACCCGTCTCATTGACGTTCTTGAGATAT 2329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2377 CTGGACATAGGATTCTTCTCTTCTCCCAAATGACCCGTCTCATTGACGTTCTTGAGATAT 2436
Query 2330 ACTTGACACTTAATGATTACAAATACCTTAGACTCGATGGTACCACAAAGACAGATCAAA 2389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2437 ACTTGACACTTAATGATTACAAATACCTTAGACTCGATGGTACCACAAAGACAGATCAAA 2496
Query 2390 GAGGGCTTTTACTGAAGCAATTCAACGAGCCAGATTCTCCCTACTTTATGTTTCTTTTGA 2449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2497 GAGGGCTTTTACTGAAGCAATTCAACGAGCCAGATTCTCCCTACTTTATGTTTCTTTTGA 2556
Query 2450 GCACACGTGCCGGAGGTCTTGGTTTGAACTTGCAAACTGCAGACACTGTTATTATCTTTG 2509
|||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2557 GCACGCGTGCTGGAGGTCTCGGTTTGAACTTGCAAACTGCAGACACTGTTATTATCTTTG 2616
Query 2510 ACAGTGATTGGAACCCACAAATGGACCAACAGGCCGAGGATCGAGCGCATCGCATAGGGC 2569
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2617 ACAGTGATTGGAACCCACAAATGGACCAACAGGCCGAGGATCGAGCTCATCGCATAGGGC 2676
Query 2570 AGAAGAAGGAAGTCAGAGTGTTTGTTTTGGTTAGCGTTGGCTCCATTGAAGAAGTAATAT 2629
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2677 AGAAGAAGGAAGTCAGAGTGTTTGTTTTGGTTAGCGTTGGCTCTGTTGAAGAAGTAATAT 2736
Query 2630 TGGAGCGTGCAAAGCAAAAGATGGGCATTGACGCCAAAGTCATACAAGCTGGACTTTTCA 2689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2737 TGGAGCGTGCAAAGCAAAAGATGGGCATTGACGCCAAAGTCATACAAGCTGGACTTTTCA 2796
Query 2690 ACACAACTTCCACTGCACAAGACCGAAGAGAGATGCTTGAAGAGATTATGCGCAAAGGAA 2749
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 2797 ACACAACTTCCACTGCACAAGACAGAAGAGAGATGCTTGAAGAGATTATGCGTAAAGGAA 2856
Query 2750 CAAGCTCGCTTGGGACAGATGTCCCCAGTGAGAGAGAAATAAATCGGCTCGCGGCTCGTA 2809
|||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 2857 CAAGCTCGCTCGGGACAGATGTCCCCAGTGAGAGAGAAATAAACCGGCTAGCGGCTCGTA 2916
Query 2810 GTGAGGATGAATTTTGGATGTTTGAGCGAATGGATGAGGAGAGACGAAGGAAGGAGAATT 2869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2917 GTGAGGATGAATTTTGGATGTTTGAGCGAATGGATGAGGAGAGACGAAGGAAGGAGAATT 2976
Query 2870 ACAGAGCCCGTCTGATGCAAGAGCAGGAAGTCCCTGAGTGGGCGTACACTACTCAGAGCC 2929
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct 2977 ACAGAGCCCGTCTGATGCAAGAGCAAGAAGTCCCTGAGTGGGCGTACACTACTCAGACCC 3036
Query 2930 AAGATGAGAAGTTGAACAGCGGAAAGTTCAATTTTGGGAGTGTCACAGGTAAGCGAAAAC 2989
|||| ||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||
Sbjct 3037 AAGAGGAGAAGTTGAACAACGGAAAGTTCCATTTTGGTAGTGTCACAGGTAAGCGAAAAC 3096
Query 2990 GTAAAGAGATCGTTTACAGTGACACACTAAGCGAGTTACAGTGGCTGAAAGCCGTGGAGA 3049
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3097 GTAAAGAGATTGTTTACAGCGACACACTAAGCGAGTTACAGTGGCTGAAAGCCGTGGAGA 3156
Query 3050 GCGGTGAAGACCTGTCAAAACTCTCTATGAGACATA---GGAGAGAGGAGAACACAAGCA 3106
||||||||||||||||||||||||| |||||| ||| |||||||||||||| ||||||
Sbjct 3157 GCGGTGAAGACCTGTCAAAACTCTCAATGAGATATAATAGGAGAGAGGAGAACGCAAGCA 3216
Query 3107 ACACAAAGACACCAACGAGTAAAAAAGCGATAGAATCTATCCAAACTGTGAGTGATGGGA 3166
||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 3217 ACACAAAGACATCAACGAGCAAAAAAGTGATAGAATCTATCCAAACTGTGAGTGATGGGA 3276
Query 3167 CGAGCgaggaggaggaagaagaggaagaagaagaagatagagcaaaggagatgagtggaa 3226
||||||||||||| ||||||||| ||||||||||| | |||| ||||||||||||||||
Sbjct 3277 CGAGCGAGGAGGATGAAGAAGAGCAAGAAGAAGAA-A--GAGCGAAGGAGATGAGTGGAA 3333
Query 3227 aacggagagtggagaagtctgaaga--a-gaagaagaaggtgaagaagagaaTGATGGAA 3283
||| ||||||||| ||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 3334 AACAGAGAGTGGACAAGTCTGAAGAGGAAGAAGAAGAAGGTGAAGAAGAGAATGATGGAA 3393
Query 3284 AGGCAATATTCAAGTGGAATACTCATAAGAAGAAAAGGTCTAGATACTCTTTTACGTGTT 3343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3394 AGGCAATATTCAAGTGGAATACTCATAAGAAGAAAAGGTCTAGATACTCTTTTACGTGTT 3453
Query 3344 CTTCGTCTGACTCTAGAGCTCAAAGTTCCAACGGAAGTAGACGAAAATGA 3393
||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3454 CTTCGTCTGACTCTAGAGCTCAAAGTTCCAATGGAAGTAGACGAAAATGA 3503
Score = 547 bits (296), Expect = 2e-154
Identities = 349/373 (94%), Gaps = 9/373 (2%)
Strand=Plus/Plus
Query 1 ATGGTGGCTCAGCAGCTTCAAGAGAGAT---GCGGCAATTCTCAAGAAGATCCAGTTGAG 57
||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||
Sbjct 195 ATGGTGGCTCAGCAGCTCCAAGAGAGATGCGGCGGCACTTCTCAAGAAGATCCAGTTGAG 254
Query 58 ACCACCAAGTCTCTGATCTGTGCTCTCAATTACATTTCTCGTGACCTTCCTTTGCCTCCT 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 255 ACCACCAAGTCTCTGATCTGTGCTCTCAATTACATTTCTCGTGACCTTCCTTTGCCTCCT 314
Query 118 CACCTCTTCGCCGCCGTTTCCTCTATCTACCATGGCGCTTCTTCTTCT-CTTTC-C-GAC 174
||||||||| |||||||||| || |||||||||||||||||||||||| || || | |||
Sbjct 315 CACCTCTTCACCGCCGTTTCTTCAATCTACCATGGCGCTTCTTCTTCTTCTCTCTCTGAC 374
Query 175 TCCGATGTCTCTCCGCCGCTGCCTACTTCCCCGCCTGGGAATAATTTAACTCCCTATGGA 234
|||||||||||||||||||| |||||||| ||||||| |||||| | |||||||||||
Sbjct 375 TCCGATGTCTCTCCGCCGCTACCTACTTCGCCGCCTGCGAATAA---AGCTCCCTATGGA 431
Query 235 GGTGATTTGATGGGTGAGTTCGAGGATGCACTTTTGAAGCAGAGACCAAATTGTGAATCA 294
| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 432 GCTGATTTGATGGGTGAATTCGAGGATGCACTTTTGAAGCAGAGACCAGATTGTGAATCA 491
Query 295 GGCTCTCGATTGATAGAATTACTCGATAATCGGAATAAGAGTCATATCCAACGCCGCTTA 354
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 492 GGCTCTCGATTGATACAATTACTGGATAATCGGAATAAGAGTCATATCCAACGCCGCTTA 551
Query 355 TCTGAACTTGAAG 367
|||||||||||||
Sbjct 552 TCTGAACTTGAAG 564
Score = 440 bits (238), Expect = 4e-122
Identities = 250/256 (98%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 405 AGAATTACCTTCTACTAGAGGTGAAGACTTGCAGGCAAAATGCTTACTTGAGCTTTATGG 464
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 563 AGAATTACCTTCTACTAGAGGTGAAGATTTGCAGGCAAAGTGCTTACTTGAGCTTTATGG 622
Query 465 GCTTAAGCTACGAGAATTGCAAGGCAAGGTTCGAACCGCGGTGAGCTCGGAATTCTGGCT 524
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 623 GCTTAAGCTACGGGAATTGCAAGGCAAGGTTCGAACCGCGGTGAGCTCGGAATTCTGGCT 682
Query 525 ACGTCTGAACTGTGCAGATGTCAGTAGCCAACTATTTGACTGGGGCATGATGCGGTTGCC 584
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 683 ACGTCTGAACTGTGCAGATGTCAGTAGCCAAGTATTTGACTGGGGCATGATGCGGTTGCC 742
Query 585 TCGTCCATTTTATGGGGCTGGAGATCCTTTTGCTATGGAAGCTGATGATCAGTTCAGAAA 644
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 743 TCGTCCATTTTATGGGGTTGGAGATCCTTTTGCTATGGAAGCTGATGATCAGTTCAGAAA 802
Query 645 GAAGCGTGATGCTGAG 660
||||||||| ||||||
Sbjct 803 GAAGCGTGACGCTGAG 818
> AT5G19310.1 | Symbols: | Homeotic gene regulator | chr5:6498779-6503432
FORWARD LENGTH=3322
Length=3322
Score = 2326 bits (1259), Expect = 0.0
Identities = 2006/2363 (85%), Gaps = 65/2363 (3%)
Strand=Plus/Plus
Query 710 AGAGGTTATCACGTTTAGAAGAAGAGGAGAAGAATCTGATTGAAACCGCCA-AGAGGAAA 768
||||||||| ||| ||||||||||||||||||||||||||||||| || || ||||||||
Sbjct 714 AGAGGTTATTACGGTTAGAAGAAGAGGAGAAGAATCTGATTGAAA-CGACACAGAGGAAA 772
Query 769 TTCTTTGCAGAAGTACTTAATGCAGTTCGTGAATTCCAGTTGCAAATTCAGGCGACTCAA 828
||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||
Sbjct 773 TTCTTTGCAGAAGTACTCAATGCTGTTCGTGAATTCCAGTTGCAAATTCAGGCGTCTCAT 832
Query 829 AAACGCCGTAGGCAAAGGAATGATGGTGTGCAGGCTTGGCATGGGAGA-CAAAGACAACG 887
| ||| ||| |||||| ||||||||||| ||||| |||||| ||| | ||||| |||||
Sbjct 833 AGACGGTGTAAGCAAAGAAATGATGGTGTCCAGGCCTGGCAT-GGAAAGCAAAGGCAACG 891
Query 888 TGCTACCCGTGCTGAAAAGTTGAGGCTCATGGCCCTTAAGTCTGATGATCAAGAGGCATA 947
||| ||||| |||||||| | ||| ||||||||||||| |||||||||||||||| |||
Sbjct 892 TGCCACCCGAGCTGAAAAACTAAGGATCATGGCCCTTAAATCTGATGATCAAGAGGAATA 951
Query 948 CATGAAACTAGTAAAGGAGAGTAAAAATGAAAGACTAACCACTCTTT-TAGAGGAGACAA 1006
||||||||||| |||||| ||||| || |||| ||||||| || ||| ||||||||||||
Sbjct 952 CATGAAACTAGCAAAGGAAAGTAAGAACGAAAAACTAACC-CTTTTTCTAGAGGAGACAA 1010
Query 1007 ACAAACTCCTTGCTAATTTGGGAGCTGCTGTTCAACGTCAGAAAGATGCTAAACTTCCGG 1066
||||| || ||| || |||||| ||||| || || |||||||||||||| |||||| | |
Sbjct 1011 ACAAAATCTTTGTTAGTTTGGGGGCTGCAGTCCAGCGTCAGAAAGATGCCAAACTTTCAG 1070
Query 1067 AAGGCATTGATCTT-CTTAAAGACTCAGAATCTGACTTGTCTGAACTTGATGGTCCAAGA 1125
|| || | || || |||| ||||||||||||||| |||| | || | | |
Sbjct 1071 AAAACA-CCAAATTACTGAAAGGCTCAGAATCTGACTTATCTG-A--TG-T--T----G- 1118
Query 1126 AGTGAACCATTGCAGGATCTGCTTCCTGATCAGGATATTGATATTACTGAGTCTGACAAT 1185
| || || || ||||| ||||||||| || |||||||| || | ||| |||||||||
Sbjct 1119 A-TGCTCC--TG-AGGATGTGCTTCCTGCCCAAGATATTGAGATCATTGACTCTGACAAT 1174
Query 1186 AACGATGACTCTAATGATTTACTAGAAGGAC-AGAGGCAGTATAACTCT-GCTATCCATT 1243
|| ||||| |||||||| ||||||||||| | ||||||||| ||||| | ||||||||||
Sbjct 1175 AATGATGATTCTAATGACTTACTAGAAGG-CGAGAGGCAGTTTAACT-TGGCTATCCATT 1232
Query 1244 CAATACAAGAGAAGGTGACGGAGCAGCCCTCACTTCTAGAAGGTGGGGAACTACGATCCT 1303
| ||||||||||||||||| ||||||| || |||||| |||||||||||||| ||||||
Sbjct 1233 CCATACAAGAGAAGGTGACAAAGCAGCCATCCCTTCTACAAGGTGGGGAACTAAGATCCT 1292
Query 1304 ATCAATTAGAAGGGCTCCAATGGATGGTTTCTCTATTCAACAATAACCT-CAATGGAATT 1362
||||||||||||| || ||||||||||| ||||||| ||||||| | || ||||| |||
Sbjct 1293 ATCAATTAGAAGGACTTCAATGGATGGTCTCTCTATACAACAATGA-CTATAATGGCATT 1351
Query 1363 TTAGCTGACGAGATGGGTTTGGGAAAAACTATTCAAACTATTTCTCTGATTGCGTATCTT 1422
|||||||| || |||||||| ||||| ||||| ||||| ||| | |||||||||||||||
Sbjct 1352 TTAGCTGATGAAATGGGTTTAGGAAAGACTATCCAAACGATTGCACTGATTGCGTATCTT 1411
Query 1423 CTGGAGAATAAAGGTGTGCCTGGGCCTTATCTTATAGTT-GCTCCAAAAGCTGTGCTACC 1481
|| |||| ||||| | | | ||||||| |||| ||| || ||||||||||||||||||||
Sbjct 1412 CTTGAGAGTAAAGATCTTCATGGGCCTCATCTAATA-TTGGCTCCAAAAGCTGTGCTACC 1470
Query 1482 AAATTGGGTAAACGAGTTTGCAACATGGGTACCAAGCATTGCAGCTTTTCTTTATGATGG 1541
|||||||| ||| ||||||||| ||||| ||| |||||| | ||||||||||| |||||
Sbjct 1471 AAATTGGGAAAATGAGTTTGCATTATGGGCACCCAGCATTTCCGCTTTTCTTTACGATGG 1530
Query 1542 ACGT-TTA-GAGGAAAGAAAAGCAATAAGGGAAAAAATTGCAGGAGAAGGAAAATTTAAT 1599
| | | ||| |||||| | |||||| | || ||| ||| | | |||||||||||||
Sbjct 1531 A--TCAAAGGAGAAAAGAACTGAAATAAGAGCAAGAATAGCA-G-G-AGGAAAATTTAAT 1585
Query 1600 GTGTTGATAACCCATTATGATCTTATCATGAGAGATAAAGCATTTTTGAAGAAAATTGAG 1659
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1586 GTGTTGATAACCCACTACGATCTTATCATGAGAGATAAAGCATTTTTGAAGAAAATTGAC 1645
Query 1660 TGGTACTACATGATTGTTGATGAAGGACATCGGCTGAAGAACCATGAATCTGCTCTAGCA 1719
||| |||||||||||||||||||||||||||| |||||||||||||||| |||||| |||
Sbjct 1646 TGGAACTACATGATTGTTGATGAAGGACATCGTCTGAAGAACCATGAATGTGCTCTCGCA 1705
Query 1720 AAGACTCTAGTAACAGGCTATCGTATAAAACGCAGACTTCTGTTAACCGGGACACCCATA 1779
|||||||||| ||| ||||| || || || ||||||||||| ||||| || || ||||||
Sbjct 1706 AAGACTCTAGGAACTGGCTACCGGATTAAGCGCAGACTTCTATTAACTGGAACTCCCATA 1765
Query 1780 CAGAATAGCCTTCAAGAACTATGGTCATTGCTTAATTTTCTCCTTCCTCACATCTTTAAC 1839
||||| || || |||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct 1766 CAGAACAGTCTGCAAGAACTATGGTCGCTGCTTAATTTTCTTCTTCCTCACATCTTTAAC 1825
Query 1840 TCAGTTCAAAACTTCGAGGAATGGTTTAATGCGCCTTTCGCTGACCGTGGTAATGTCAGT 1899
||| |||| || ||||| |||||||||||| | || ||||| || |||||| || ||||
Sbjct 1826 TCAATTCATAATTTCGAAGAATGGTTTAATACTCCATTCGCAGAATGTGGTAGTGCCAGT 1885
Query 1900 CTTACGGATGAAGAGGAGCTCTTGATTATCCACCGTCTGCATCATGTTATAAGGCCGTTT 1959
||||| |||||||||||||| |||||||| |||||||||||||||| ||||||||||||
Sbjct 1886 CTTACAGATGAAGAGGAGCTGTTGATTATTAACCGTCTGCATCATGTCATAAGGCCGTTT 1945
Query 1960 ATACTGAGAA-GAAAAAAGGACGAAGTAGAGAAATTCCTTCCTGGAAAGACACAGGTCAT 2018
||||||||| ||||||| | || || |||||||||||||||||||||||||| |||||
Sbjct 1946 CTACTGAGAAGGAAAAAAAG-TGAGGTTGAGAAATTCCTTCCTGGAAAGACACAAGTCAT 2004
Query 2019 ATTGAAGTGTGATATGTCGGCATGGCAGAAAGTGTATTACAAACAAGTTACAGACATGGG 2078
| ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| | ||
Sbjct 2005 ACTGAAGTGTGATATGTCGGCTTGGCAAAAATTGTATTACAAACAAGTTACAGACGTAGG 2064
Query 2079 CAGGGTTGGCCTTCAAACAGG-ATCTGGGAAATCAAAGAGTCTGCAAAATCTAACGATGC 2137
|||||| || ||||| | || | ||||||||||||||||||||| ||||| || ||||
Sbjct 2065 CAGGGTCGGTCTTCATTCTGGCA-ATGGGAAATCAAAGAGTCTGCAGAATCTGACAATGC 2123
Query 2138 AATTAAGAAAGTGTTGTAACCATCCCTATCTATTTGTTGGAGGAGACTACAATATGTGGA 2197
||||||||||||||||||||||||| || ||||| ||||||| ||| || || ||||| |
Sbjct 2124 AATTAAGAAAGTGTTGTAACCATCCGTACCTATTCGTTGGAGCAGATTATAACATGTGTA 2183
Query 2198 AGAAACCTGAGATTGTGAGAGCTTCAGGGAAATTTGAACTCCTTGATCGTCTCCTTCCAA 2257
|||| ||||||||||||||||||||||| ||||| || | |||||||| ||||||||||
Sbjct 2184 AGAAGCCTGAGATTGTGAGAGCTTCAGGAAAATTCGAGTTACTTGATCGCCTCCTTCCAA 2243
Query 2258 AACTG-CGCAAGGCTGGACATAGGATTCTTCTCTTCTCCCAAATGACCCGTCTCATTGAC 2316
||||| | || ||||||||||| ||||| ||||| || |||||||| ||||||||||||
Sbjct 2244 AACTGAAG-AAAGCTGGACATAGAATTCTGCTCTTTTCTCAAATGACTCGTCTCATTGAC 2302
Query 2317 GTTCTTGAGATATACTTGACACTTAATGATTACAAATACCTTAGACTCGATGGTACCACA 2376
|||| || || |||||| |||| ||||| |||| ||||| ||||| || |||| ||||
Sbjct 2303 CTTCTCGAAATTTACTTGTCACTCAATGACTACATGTACCTCAGACTTGACGGTAGCACA 2362
Query 2377 AAGACAGATCAAAGAGGGCTTTTACTGAAGCAATTCAACGAGCCAGATTCTCCCTACTTT 2436
|||||||| ||||||||| |||||||||||||||||||||| || || ||||||||||||
Sbjct 2363 AAGACAGACCAAAGAGGGATTTTACTGAAGCAATTCAACGAACCGGACTCTCCCTACTTT 2422
Query 2437 ATGTTTCTTTTGAGCACACGTGCCGGAGGTCTTGGTTTGAACTTGCAAACTGCAGACACT 2496
||||||||| ||||||||||||| || ||||||||||||||||| |||||||||||||||
Sbjct 2423 ATGTTTCTTCTGAGCACACGTGCTGGTGGTCTTGGTTTGAACTTACAAACTGCAGACACT 2482
Query 2497 GTTATTATCTTTGACAGTGATTGGAACCCACAAATGGACCAACAGGCCGAGGATCGAGCG 2556
| ||||| ||||||||||||||||| |||||||||||||| || || |||||||| ||
Sbjct 2483 ATAATTATATTTGACAGTGATTGGAATCCACAAATGGACCAGCAAGCAGAGGATCGTGCT 2542
Query 2557 CATCGCATAGGGCAGAAGAAGGAAGTCAGAGTGTTTGTTTTGGTTAGCGTTGGCTCCATT 2616
||||| ||||||||||| |||||||| ||||| ||||||||||||||| |||| ||||||
Sbjct 2543 CATCGGATAGGGCAGAAAAAGGAAGTGAGAGTTTTTGTTTTGGTTAGCATTGGATCCATT 2602
Query 2617 GAAGAAGTAATATTGGAGCGTGCAAAGCAAAAGATGGGCATTGACGCCAAAGTCATACAA 2676
||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct 2603 GAAGAAGTAATATTGGAGCGTGCAAAGCAAAAGATGGGCATCGATGCGAAAGTCATACAA 2662
Query 2677 GCTGGACTTTTCAACACAACTTCCACTGCACAAGACCGAAGAGAGATGCTTGAAGAGATT 2736
|| || || |||||||||||||| ||||| |||||| | ||||||||||| ||||||||
Sbjct 2663 GCAGGGCTCTTCAACACAACTTCTACTGCTCAAGACAGGAGAGAGATGCTGGAAGAGATC 2722
Query 2737 ATGCGCAAAGGAACAAGCTCGCTTGGGACA-GATGTCCCCAGTGAGAGAGAAATAAATCG 2795
||| |||||||||||||||| || |||| | ||||| || ||||||||||| || || ||
Sbjct 2723 ATGAGCAAAGGAACAAGCTCACT-GGGAGAAGATGTGCCAAGTGAGAGAGAGATTAACCG 2781
Query 2796 GCTCGCGGCTCGTAGTGAGGATGAATTTTGGATGTTTGAGCGAATGGATGAGGAGAGACG 2855
|||||| ||||| | |||||| || |||||||||||||| | |||||| ||||| |||||
Sbjct 2782 GCTCGCAGCTCGAACTGAGGAAGAGTTTTGGATGTTTGAACAAATGGACGAGGAAAGACG 2841
Query 2856 -AAGGAAGGAGAATTACAGAGCC-CGTCTGATGCAAGAGCAGGAAGT-CCCTGAGTGGGC 2912
|| |||||||| |||| || | ||||| ||| ||||| ||||||| ||| ||||||||
Sbjct 2842 TAAA-AAGGAGAACTACA-AGACACGTCTCATGGAAGAGAAGGAAGTTCCC-GAGTGGGC 2898
Query 2913 GTACACTACTCAGAG-C-CAAGATGAGAAGT-TGAACAGCGGAAAGTTCAATTTTGGGAG 2969
|||||| |||||| | ||||| || ||| | ||| ||| ||| || |||||| ||
Sbjct 2899 TTACACT--TCAGAGACTCAAGAAGACAAGACT-AAC-GCGAAAAAC-CA-TTTTGGTAG 2952
Query 2970 TGTCACAGGTAAGCGAAAACGTAAAGAGATC-GTTTACAGTGACACACTAAGCGAGTTAC 3028
|||| ||||| || ||||| ||||| | | || || || ||| | ||||||| || |
Sbjct 2953 CCTCACGGGTAAACGGAAACGAAAAGA-AGCAGTGTATAGCGACTCTTTAAGCGATTTGC 3011
Query 3029 AGTGGCTGAAAGCCG-TGGAGAG 3050
||||| ||||||| | |||||||
Sbjct 3012 AGTGGATGAAAGC-GATGGAGAG 3033
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 168861930138
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5