BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg904201 Length=3279 Score E Sequences producing significant alignments: (Bits) Value AT3G13065.1 | Symbols: SRF4 | STRUBBELIG-receptor family 4 | ch... 3286 0.0 AT3G13062.2 | Symbols: | Polyketide cyclase/dehydrase and lipi... 1380 0.0 AT1G55960.1 | Symbols: | Polyketide cyclase/dehydrase and lipi... 593 3e-168 AT2G01372.1 | Symbols: | Pseudogene of AT3G13062 | chr2:169967... 95.3 3e-18 > AT3G13065.1 | Symbols: SRF4 | STRUBBELIG-receptor family 4 | chr3:4187371-4191298 FORWARD LENGTH=2638 Length=2638 Score = 3286 bits (1779), Expect = 0.0 Identities = 1909/1973 (97%), Gaps = 4/1973 (0%) Strand=Plus/Plus Query 1309 GTATCGGCTCTTAATGACGCTTATAAGAGCATGAACTCTCCATCAAAACTTAAAGGATGG 1368 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 233 GTATCTGCTCTTAATGACGCTTATAAGAGCATGAACTCTCCATCAAAACTCAAAGGCTGG 292 Query 1369 TCTTCAAGCGGAGGCGATCCTTGTGGTGATTCATGGGATGGCATTACATGCAAAGGCTCT 1428 |||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||| Sbjct 293 TCTTCAAGCGGAGGCGATCCTTGTGGCGATTCGTGGGATGGCATTACTTGCAAAGGCTCT 352 Query 1429 TCTGTTACTGAAATAAAAGTATCGGGACGTGGACTCAGTGGATCTTTAGGTTACCAGCTT 1488 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 353 TCTGTTACTGAAATAAAAGTATCTGGACGTGGACTCAGTGGATCTTTAGGTTACCAGCTT 412 Query 1489 GGAAACTTGAAATCACTCACTTACCTTGATGTAAGCAAGAACAATCTTAACGGAAACTTA 1548 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 413 GGAAACTTGAAATCGCTCACTTACCTTGATGTAAGCAAGAACAATCTTAACGGAAACTTA 472 Query 1549 CCCTACCAGCTTCCTGACAAGCTTACTTATCTAGATGGCTCTGAGAATGACTTCAACGGT 1608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 473 CCCTACCAGCTTCCTGACAAGCTTACTTATCTAGATGGCTCTGAGAATGACTTCAACGGT 532 Query 1609 AATGTGCCATACTCGGTATCTCTCATGAATGATCTCAGTTACCTAAACCTTGGCCGTAAC 1668 ||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct 533 AATGTGCCATATTCGGTGTCTCTCATGAACGACCTCAGTTACCTAAACCTTGGCCGTAAC 592 Query 1669 AACCTCAATGGTGAACTCAGCGACATGTTTCAAAAGCTTCCAAAACTTGAAACAATTGAT 1728 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 593 AACCTCAATGGTGAACTCAGTGACATGTTTCAAAAGCTTCCAAAACTTGAAACAATTGAT 652 Query 1729 CTGTCTTCCAATCAACTCACGGGAAAACTACCGCAGAGTTTTGCCAATCTAACAGGCCTT 1788 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 653 CTTTCTTCCAATCAACTCACGGGAAAACTACCGCAGAGTTTTGCCAATCTAACAGGTCTT 712 Query 1789 AAAACACTGCACTTGCAAGAAAACCAATTCAAAGGCTCTATAAATGCTCTCAGGGACCTC 1848 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 713 AAAACACTGCATTTGCAAGAAAACCAATTCAAAGGCTCTATAAATGCTCTCAGGGACCTC 772 Query 1849 CCTCAGATTGATGATGTAAACGTCGCAAACAATCAATTTACTGGTTGGATCCCAAACGAG 1908 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 773 CCTCAGATTGATGATGTAAACGTAGCAAACAATCAATTTACTGGTTGGATCCCAAACGAG 832 Query 1909 TTGAAGAACATTGGAAACCTTGAAACTGGAGGAAACAAGTGGTCAAGCGGTAGAGCTCCT 1968 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 833 TTGAAGAATATTGGAAACCTTGAAACTGGAGGAAACAAGTGGTCAAGCGGTAGAGCTCCT 892 Query 1969 TCACCACCTCCCGGAACCCGTCACATAGACAGAAACTCATCGGGAGGCGGTGGAGGAAGC 2028 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 893 TCACCACCTCCGGGAACCCGTCACATAGACAGAAACTCATCAGGAGGCGGTGGAGGAAGC 952 Query 2029 AGCAAGGCTCTGACACTTGGAGTTATAATAGCAGTTTCTTGTATAGGTGGACTCATTTTA 2088 ||||||||||||||||| |||||||||||||| || |||| ||||||||||||||||||| Sbjct 953 AGCAAGGCTCTGACACTAGGAGTTATAATAGCGGTGTCTTCTATAGGTGGACTCATTTTA 1012 Query 2089 TTTGCAGGAG-TGATTGCATTGTTTTCTCGAAGAAAGAACTCTCATCATTCTTCTCACTT 2147 |||||||| | ||||||||||| |||||||||||||||||||| || ||||||||||||| Sbjct 1013 TTTGCAGG-GTTGATTGCATTGATTTCTCGAAGAAAGAACTCTAATGATTCTTCTCACTT 1071 Query 2148 TTTCGACGAAGAGAAAGGATCCAACCGAAACAAGCCACTCTTCACACCACAATCCTCTCA 2207 ||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||| Sbjct 1072 TTTCGACGACGAGAAAGGAACCAACCGAAGCAAGCCACTCTTCACACCACAATCCTCTCA 1131 Query 2208 GATGCTTCAATTCGATAATATGGAAGAATTCAAAGGCCAGAAGACAGTTGATTCTAATAC 2267 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1132 GATGCTTCAATTCGATAATATGGAAGAATTCAAAAACCAGAAGACAGTTGATTCTAATAC 1191 Query 2268 TTCACTTGAAACAAAGCCTTCTGTTAAAAGAACTTCTTCTGTCAGTTTCAAGAACTCTCC 2327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1192 TTCACTTGAAACAAAGCCTTCTGTTAAAAGAACTTCTTCTGTCAGTTTCAAGAACTCTCC 1251 Query 2328 TACTTTTCATCTCATACCTTCTACGCAAGTGGCTGCAACCCCTGATCATTCCTCCACC-C 2386 |||||||||||||||||||||||| ||||||||||| |||||||| | |||||||||| | Sbjct 1252 TACTTTTCATCTCATACCTTCTACCCAAGTGGCTGCTACCCCTGACCGTTCCTCCACCTC 1311 Query 2387 CCGAAAACTCTCCTGATACACGCGGTGTGAAGGTGTTTTCACTAACGGATTTGCAGAATT 2446 || || ||||||||||||||||||||||||| | |||||||||| |||||||||||||| Sbjct 1312 CC-AAGACTCTCCTGATACACGCGGTGTGAAAGCGTTTTCACTAGCGGATTTGCAGAATA 1370 Query 2447 CCGCGTCTTGTTTCTCTCCGAATCGCCTTCTTGGTGAAGGAACCATTGGACGTGTTTATA 2506 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1371 CCGCGTCTTGTTTCTCGCCGAATCGCCTTCTTGGTGAAGGAACCATTGGACGTGTTTATA 1430 Query 2507 AAGCTAAATTTCAAGATGGAAGGAAATATGCAGTCAAAGAGATTGATTCTTCACTGTTAG 2566 ||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 1431 AAGCTAAATTTCAGGATGGAAGGAAATTTGCAGTCAAAGAGATTGATTCTTCTCTGTTAG 1490 Query 2567 GAAAAGGAAATCCGGAAGAGTTTTCACACATAGTGTCGAGTATCTCGAGTATTCACCACA 2626 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1491 GAAAAGGCAATCCGGAAGAGTTTTCACACATAGTGTCGAGTATCTCGAGTATTCACCACA 1550 Query 2627 AGAATATGGCAGAACTCGTGGGTTATTGTTCAGAACAAGGAAGGAATATGCTTGTTTATG 2686 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1551 AGAATATGGCAGAACTCGTGGGTTATTGTTCAGAACAAGGAAGAAATATGCTTGTTTATG 1610 Query 2687 AGTATTTCACAAGTGGATCACTTCACAGATTTCTTCACCTGTCTGATGATTTCAGCAAAC 2746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1611 AGTATTTCACAAGTGGATCACTTCACAGATTTCTTCACCTGTCTGATGATTTCAGCAAAC 1670 Query 2747 CATTAACGTGGAACACCAGAGTCCGAATCGCTCTTGGAACTGCTCAAGCTATAGAGTACC 2806 |||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| Sbjct 1671 CATTGACGTGGAACACCAGAATCCGAATCGCTCTCGGAACTGCTAAAGCTATAGAGTACC 1730 Query 2807 TTCATGAAACATGTTCGCCTCCGCTAGTTCACAAGAACATCAAGTCATCGAACATTTTAC 2866 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1731 TTCATGAAACATGTTCGCCTCCGCTAGTTCACAAGAACATCAAGTCATCAAACATTTTAC 1790 Query 2867 TCGACAATGAGCTAAATCCCCGCCTCTCAGACTATGGCTTGGCAAACTTTCACCACCGCA 2926 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1791 TTGATAATGAGCTAAATCCCCGCCTCTCAGACTATGGCTTGGCAAACTTTCACCACCGCA 1850 Query 2927 CAAGTCAGAATCTTGGAGTTGGATACAATGCCCCGGAATGCACAGATCCCTCGGCTTACA 2986 |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct 1851 CAAGTCAGAATCTTGGAGTTGGATACAATGCCCCAGAATGCACAGATCCCTCCGCTTACA 1910 Query 2987 CACAAAAGAGCGACGTATACAGCTTTGGTGTGGTGATGCTTGAGCTGCTAACTGGTCGAA 3046 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1911 CACAAAAGAGCGACGTGTACAGCTTTGGTGTGGTGATGCTTGAGCTGCTAACTGGTCGAA 1970 Query 3047 CGCCTTATGACAGTGAGAGGCCAAAAGCAGAACAGTCTTTAGTTCGTTGGGCAAAGCCGC 3106 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1971 AGCCTTATGACAGTGGGAGGCCAAAAGCAGAACAGTCTTTAGTTCGTTGGGCAAAGCCGC 2030 Query 3107 AGCTTAAAGACATGGATACTCTGGATGAAATGGTGGATCCCGCGTTGTGCGGACTCTACG 3166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2031 AGCTTAAAGACATGGATACTCTGGATGAAATGGTGGATCCCGCGTTGTGCGGACTCTACG 2090 Query 3167 CTCCAGAATCTGTATCATCATTCGCGGATATAGTTTCCATCTGCGTAATGACGGAGCCTG 3226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2091 CTCCAGAATCTGTATCATCATTCGCGGATATAGTTTCCATCTGCGTAATGACGGAGCCTG 2150 Query 3227 GACTTCGGCCTCCAGTGTCAAATGTGGTGGAGGCATTGAAGAGGCTAGTGTAG 3279 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2151 GACTTAGGCCTCCAGTGTCAAATGTGGTGGAGGCATTGAAGAGGCTAGTGTAG 2203 > AT3G13062.2 | Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr3:4184569-4187453 FORWARD LENGTH=1716 Length=1716 Score = 1380 bits (747), Expect = 0.0 Identities = 870/928 (94%), Gaps = 14/928 (2%) Strand=Plus/Plus Query 1 ATGAATAGTGGTGATACCTTATCGACGTTAGCTCAATTTATCTCCTCTTCCGAGAGATTT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 209 ATGAATAGTGGTGATACCTTATCGACGTTAGCTCAATTTATCTCCTCTTCCGAGAGATTT 268 Query 61 TTCCGGCGAGCTGACGGGT-ATGGAGGCTTTTGTTATTGCTGGGCCACCGTGTTCGCACT 119 ||||||||||||||| ||| ||| || ||||||||||||||||||||||||| ||||||| Sbjct 269 TTCCGGCGAGCTGAC-GGTGATGTAGTCTTTTGTTATTGCTGGGCCACCGTGCTCGCACT 327 Query 120 TGTCTTCATTCTTTTCTACCAATTCGTCCTTTCCCCAAAACTCCGATTCTTCAGTCATGc 179 ||||||||||||| ||||||||||| ||||||||| ||| |||||||||||||||||| Sbjct 328 TGTCTTCATTCTTCTCTACCAATTCTTCCTTTCCCGGAAATTCCGATTCTTCAGTCATG- 386 Query 180 ttcttcttcttcttcttcCCCTGTTGTCTCGGTTTCTCAATCTCTGAGCTCCCAATCAAG 239 ||||||||||||||||||| |||||||||||||||||||| |||||||||||| | Sbjct 387 -----CTTCTTCTTCTTCCCCTGTCGTCTCGGTTTCTCAATCTCTCAGCTCCCAATCAGG 441 Query 240 AATATCTACTACACTTGTTTCTGATGAAGATCTAAAGGGTCTGTTTGAAAAATTGGAGGA 299 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| Sbjct 442 AATATCTACTACACTTGTTTCTGATGAAGATCTAAAGGGTCTGATTCAAAAATTGGGGGA 501 Query 300 AACAAGTGAGGATGCTCAGATATGGGAAAATGTTATTCAGAAAAGCAACCCTCGCGTCTC 359 || ||||||||||||| ||||||||||| |||||||| |||||||||||||||| |||| Sbjct 502 AAGAAGTGAGGATGCTGAGATATGGGAAGATGTTATTAAGAAAAGCAACCCTCGTATCTC 561 Query 360 ATACACTGCTAAATGCTGCAAACCAACAGATGGTGGTCCCATGAAGTATTTGAGTACTAC 419 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| || Sbjct 562 CTACACTGCTAAATGCTGCAAACCAACAGATGGTAGTCCCATGAAGTATCTGAGTACAAC 621 Query 420 AGTGTTTGAGGATTGCTCGCCAGAGGTTTTGAGGGACTTTTACATGGACAATGAATACAG 479 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 622 TGTGTTTGAGGATTGCTCCCCAGAGGTTTTGAGGGACTTTTACATGGACAATGAATACAG 681 Query 480 GAAACAATGGGATAAAACTGTCGTTGAGCATGAGCAGTTGCAGGTTGACAGTAATAGTGG 539 |||||||||||| || ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 682 GAAACAATGGGACAAGACTGTGGTTGAGCATGAGCAATTGCAGGTTGACAGTAATAGTGG 741 Query 540 AATCGAGATTGGTCGCACTATAAAAAAGTTTCCCTTGTTAACACCAAGGGAGTATGTATT 599 || ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 742 GATTGAGATTGGTCGCACTATAAAAAAGTTTCCCTTGTTGACTCCAAGGGAGTATGTATT 801 Query 600 AGCGTGGAAATTGTGGGAGGGGAAGGATAAGTTTTACTGTTTCATCAAGGAATGTGATCA 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 802 AGCGTGGAAATTGTGGGAGGGGAAGGATAAGTTTTACTGTTTCATCAAGGAATGTGATCA 861 Query 660 CAATATGGTGCCGCAACAGAGGAAGTATGTACGTGTAAGTTATTTCAGATCTGGTTGGCG 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 862 CAATATGGTGCCGCAACAGAGGAAGTATGTACGTGTAAGTTATTTCAGATCTGGTTGGCG 921 Query 720 AATTAGGAAAGG-CA----AG-AACGCTTGTGAGATACACATGTTTCACCAGGAAGATGC 773 ||||||||||| | || ||||||||||||||||||||| |||||||||| ||||| Sbjct 922 AATTAGGAAAGTTCCTGGTAGGAACGCTTGTGAGATACACATGGTTCACCAGGAGGATGC 981 Query 774 GGGATTAAATGTTGAGATGGCAAAGCTTGCTTTCTCTAGAGGCATATGGAGTTACGTTTG 833 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 982 TGGATTAAATGTTGAGATGGCAAAGCTTGCTTTCTCAAGAGGCATATGGAGTTACGTTTG 1041 Query 834 TAAGATGGAAAATGCACTTCGTAAGTACATTGCAACCAGTCATAGACCCCAAGGGCCCAC 893 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 1042 TAAGATGGAAAATGCACTTCGCAAGTACATTGCAACCAGTCATCGACCCCAAGGGCCCAC 1101 Query 894 TTTATCTGCTGTAAGCTTAATGAAGAAG 921 ||||||||||||||||||||||| ||| Sbjct 1102 ATTATCTGCTGTAAGCTTAATGAAAAAG 1129 Score = 440 bits (238), Expect = 4e-122 Identities = 271/287 (94%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 1025 AGATTCCATCAGAGTTAGAAAGTCAGACAGATGACATCACAAACTCCTTGGGAACTACTA 1084 |||||||||| |||||||||||||||||||| ||||| |||||||||| ||||||||| | Sbjct 1128 AGATTCCATCGGAGTTAGAAAGTCAGACAGACGACATTACAAACTCCTCGGGAACTACCA 1187 Query 1085 CTAGTGGTCTGCACACAGGTGAAGGAGCCAAACGGAAGAAACTGTTGAGAAAGCCTTCAA 1144 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1188 CTAGTGGTATGCACACAGGTGAAGGAGCCAAACGGAAGAAACTGTTGAGAAAGCCTTCAA 1247 Query 1145 AGAAACTGATAGCAAATGGTATGTTACTTTTGGGCGGTGCAGTTGGTGGTGCAATCTGCC 1204 ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct 1248 AGAAACTGATAGCAAATGGTATGTTACTTGTGGGCGGTGCCGTTGGTGGTGCAATCTGCC 1307 Query 1205 TGTCTCGTGGTCACTCCGCCTT-GGGAGCAAAGGTCGCCTTGGCCTACTTCTTGTCGAAG 1263 |||||||||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||| Sbjct 1308 TGTCTCGTGGTCACTCCGCCTTAGGG-GCAAAGGTCGCGTTGGCTTACTTCTTGTCGAAG 1366 Query 1264 ATGAGAAAACGTGGAGCTCCACTGAGTCAAACAACCCAAAACGCTGT 1310 |||||||| |||||||||| |||||||||||| ||||||||||||| Sbjct 1367 ATGAGAAAGCGTGGAGCTCAACTGAGTCAAACTTCCCAAAACGCTGT 1413 > AT1G55960.1 | Symbols: | Polyketide cyclase/dehydrase and lipid transport superfamily protein | chr1:20927643-20930017 REVERSE LENGTH=1723 Length=1723 Score = 593 bits (321), Expect = 3e-168 Identities = 593/718 (83%), Gaps = 44/718 (6%) Strand=Plus/Plus Query 228 CTCCCAATCAAGAATATCTACTACACTTGTTTCTGATGAAGATCT-AAAGGGTCTGTTTG 286 ||| |||||||| ||||| | | ||| || |||||||||||| | ||| |||| | | Sbjct 414 CTCTCAATCAAGGATATC--C-AAACTAGTCTCTGATGAAGATTTGAAA-TTTCTGATCG 469 Query 287 AAAAATT---GGAGGAAACAAGTGAGGATGCTC--AGATATGGGAAAATGTTATTCAGAA 341 | || || ||||||||||| ||| | | | ||||||||||| |||||||||| || Sbjct 470 AGAATTTGGAGGAGGAAACAAATGA--TTCCACGGAGATATGGGAACATGTTATTCACAA 527 Query 342 AAGCAACCCTCGCGTCTCATACACTGCTAAATGCTGCAAA-CCAACAGAT---GGTGGTC 397 ||||||| |||| | |||||| |||||||| |||||||| |||| |||| ||||||| Sbjct 528 AAGCAACGATCGCATTTCATACTCTGCTAAACGCTGCAAACCCAA-AGATGGCGGTGGTC 586 Query 398 CCATGAAGTATTTGAGTACT-ACAGTGTTTGAGGATTGCTC-GCCAGAGGTTTTGAGGGA 455 | |||||||| | ||| | || || || |||| || ||| | ||||| || ||||||| Sbjct 587 CTATGAAGTACCTAAGT-GTCACGGTCTTCGAGGGTTTCTCTG-CAGAGATTGTGAGGGA 644 Query 456 CTTTTACATGGACAATGAATACAGGAAACAATGGGATAAAACTGTCGTTGAGCATGAGCA 515 |||||||||||||||||| || ||||||| ||||||||| ||||| |||||||||||||| Sbjct 645 CTTTTACATGGACAATGATTATAGGAAACTATGGGATAAGACTGTGGTTGAGCATGAGCA 704 Query 516 GTTGCAGGTTGACAGTAATAGTGGAATCGAGATTGGTCGCACTATAAAAAAGTTTCCCTT 575 |||||||||||| ||||||| |||||| |||||||||||||| || |||||||||||||| Sbjct 705 GTTGCAGGTTGATAGTAATACTGGAATTGAGATTGGTCGCACCATTAAAAAGTTTCCCTT 764 Query 576 GTTAACACCAAGGGAGTATGTAT-TAGCGTGGAAATTGTGGGAGGGGAAGGATAAGT--T 632 ||| ||| | || ||||| || | |||| |||| ||||||| | || ||||| ||| | Sbjct 765 GTTGACATCGAGAGAGTACGT-TCTAGCTTGGAGATTGTGGCAAGGAAAGGAGAAGAAGT 823 Query 633 T-TACTGTTTCATCAA-GGAATGTGATCACAATATGGTGCCGCAACAGAGGAAGTATGTA 690 | |||||||||| ||| ||||||||||||||||||||| || |||||||||||||||||| Sbjct 824 TCTACTGTTTCA-CAAAGGAATGTGATCACAATATGGTACCACAACAGAGGAAGTATGTA 882 Query 691 CGTGTAAGTTA-TTTCAGATCTGGTTGGCGAATTAGGAAAGG-CA----AGAAC-GCTTG 743 ||||||||||| ||| ||||||||||||||||| ||| ||| | |||| || || Sbjct 883 CGTGTAAGTTACTTT-AGATCTGGTTGGCGAATCAGGCAAGTTCCCGGTAGAAATGCGTG 941 Query 744 TGAGATACACA-TGTTTCACCAGGAAGA-TGC-GGGATTAAATGTTGAGATGGCAAAGCT 800 |||||| || | ||||||||||||| || ||| ||| ||||||||||||||||| ||||| Sbjct 942 TGAGAT-CAAAATGTTTCACCAGGA-GAATGCTGGG-TTAAATGTTGAGATGGCCAAGCT 998 Query 801 TGCTTTCTCTAGAGGCATATGGAGTTACGTTTGTAAGATGGAAAATGCACTTCGTAAGTA 860 || ||||| | ||||||||||||||||||||||||||||||||| || ||| |||| || Sbjct 999 CGCCTTCTCAAAAGGCATATGGAGTTACGTTTGTAAGATGGAAAACGCTCTTTGTAAATA 1058 Query 861 CATTGCAACCAGTCATAGACCCCAAGGGCCCACTT-TATCTGCTGTAAGCTTAATGAA 917 ||| ||||||||||||||| ||||||| |||| || |||||||||| | ||||||||| Sbjct 1059 CATAGCAACCAGTCATAGAACCCAAGGACCCA-TTCTATCTGCTGTCACCTTAATGAA 1115 > AT2G01372.1 | Symbols: | Pseudogene of AT3G13062 | chr2:169967-170613 REVERSE LENGTH=647 Length=647 Score = 95.3 bits (51), Expect = 3e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 661 AATATGGT-GCCGCAACAGAGGAAGTATGTACGTGTAAGTTATTTCAGATCTGGTTGGCG 719 |||||||| | | |||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct 411 AATATGGTAG-CACAACAGAGGAAGTATGTACGTGTAAGTTATTTTAGAACTGGTTGGCG 469 Query 720 AATTAGGAAAGGCAAG 735 ||| | | |||||||| Sbjct 470 AATCAAGCAAGGCAAG 485 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 163142898636 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5