BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg904732 Length=390 Score E Sequences producing significant alignments: (Bits) Value AT3G17675.1 | Symbols: | Cupredoxin superfamily protein | chr3... 621 1e-177 > AT3G17675.1 | Symbols: | Cupredoxin superfamily protein | chr3:6042244-6042850 REVERSE LENGTH=390 Length=390 Score = 621 bits (336), Expect = 1e-177 Identities = 372/390 (95%), Gaps = 0/390 (0%) Strand=Plus/Plus Query 1 ATGCTTAATCAGGGAAACCAATTCTCTAGCTTGATTATACTCTATGCCATTTTCTCTCTA 60 |||||| ||||||||| || ||||||||||||||||||||||||||||||||||||| || Sbjct 1 ATGCTTCATCAGGGAAGCCGATTCTCTAGCTTGATTATACTCTATGCCATTTTCTCTTTA 60 Query 61 TCTTCTCTCATGCTAAAATCTGAAGGAACAGAGCATATAGTTGGTGACAGCAGTGGCTGG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 61 TCTTCTCTCATGCTAAAATCTGAAGGAACAGAGCATATAGTTGGTGACAGCAATGGCTGG 120 Query 121 GAACTCTTTACAAACTATACCAACTGGACACAGGGAAGAGAGTTTCATGTCGGTGATGTC 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 121 GAACTCTTTACAAACTATACCAACTGGACACAGGGAAGAGAGTTTCATGTCGGCGATGTC 180 Query 181 TTAGTATTCAACTACAAAAGTGACCAGCATAATGTTATGCAAGTTAACTCTACAGCATAC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TTAGTATTCAACTACAAAAGTGACCAGCATAATGTTATGCAAGTTAACTCTACAGCATAC 240 Query 241 ACAGATTGTGGAATAGACAACTACACATCTCTCTTCACCAAAGGCAATGACTCAATAATC 300 |||||||||||| ||||||| |||||| |||||||||||||||| || |||||||||||| Sbjct 241 ACAGATTGTGGATTAGACAATTACACAACTCTCTTCACCAAAGGTAACGACTCAATAATC 300 Query 301 ATATCAGAAGTTGGAGAGTTATGGTTCATCTGCGCAGTGGGTGATCACTGTGAAAATGGC 360 |||||||||||||| || ||||||||||||| | ||||| ||||||||||| ||||||| Sbjct 301 CTATCAGAAGTTGGAAAGCTATGGTTCATCTGTGGAGTGGATGATCACTGTGTAAATGGC 360 Query 361 CAGAAGCTAAGCATTAATGTAGCTCCTTGA 390 |||||||||||||||||||||||||||||| Sbjct 361 CAGAAGCTAAGCATTAATGTAGCTCCTTGA 390 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 18397996134 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5