BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg905719 Length=969 Score E Sequences producing significant alignments: (Bits) Value AT1G24070.1 | Symbols: ATCSLA10, CSLA10 | cellulose synthase-li... 1218 0.0 AT4G13410.1 | Symbols: ATCSLA15, CSLA15 | Nucleotide-diphospho-... 621 4e-177 AT5G16190.1 | Symbols: ATCSLA11, CSLA11 | cellulose synthase li... 468 5e-131 AT4G16590.1 | Symbols: ATCSLA01, CSLA01, ATCSLA1 | cellulose sy... 374 1e-102 > AT1G24070.1 | Symbols: ATCSLA10, CSLA10 | cellulose synthase-like A10 | chr1:8516238-8519734 REVERSE LENGTH=1858 Length=1858 Score = 1218 bits (659), Expect = 0.0 Identities = 854/940 (91%), Gaps = 45/940 (5%) Strand=Plus/Plus Query 27 GAAGCTTGAAGCATCCGTTAATGGTGTGAGGATAAGCATCGACACAACATGGACACGAGA 86 |||||||||| ||||| | ||||||| |||||||||| ||||||| |||||||||||||| Sbjct 108 GAAGCTTGAAACATCCATAAATGGTGCGAGGATAAGCTTCGACACGACATGGACACGAGA 167 Query 87 ATTGAGGAGCTTCCTTATAGTTCCCTTATTCAAGTGTTTGGTGGCTCTTTGTTTGATAAT 146 ||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 168 ATTTAGGAGCTTATTTATAGTTCCCTTATTCAAGTGTTTGGTGGCTTTTTGTTTGATAAT 227 Query 147 CTCCCTCTTAGTTTTCATAGAGGGTATATACATGAACCTTGTAGTGCTCTACGTCAAGTT 206 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct 228 CTCCCTCTTAGTTTTCATAGAGGGTATATACATGAACCTTGTAGTACTCTACGTCAAGGT 287 Query 207 GTTTAAGCGAAAACCCGAAAAA-TCTACAAATAGGAGCCGATGCCGGAGGACATTGAGCT 265 |||| ||||||||||||||||| | || | || |||| |||||| |||||||||||||| Sbjct 288 GTTTGAGCGAAAACCCGAAAAAGTTTATAGATGGGAGGCGATGCAAGAGGACATTGAGCT 347 Query 266 CGGACATGAAACCTACCCCATGGTCCTTGTTCAAATTCCAATGTACAACGAAAAAGAGGT 325 ||||||||||||||||||||||||||||| ||||||||||||||||||| |||| | | Sbjct 348 TGGACATGAAACCTACCCCATGGTCCTTGTCCAAATTCCAATGTACAACG-AAAA-A-G- 403 Query 326 ATATCTACATGTATTCAGTCCTTCAATTATCTATAGGTGCTGCATGTAGACTAATCTGGC 385 | | |||||||||||||||||||||||||||||||||||||| |||| Sbjct 404 --------A-G------GTCCTTCAATTATCTATAGGTGCTGCATGTAGACTAATATGGC 448 Query 386 CATTGGACCGCCTAATTGTTCAAGTTCTAGATGATTCCACTGATCAAACCATCAAGAAGT 445 |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 449 CATTGGACCGCCTAATTGTTCAAGTTTTAGATGATTCCACTGATCAAACCATC------- 501 Query 446 ATAGAACTGAATTTCAGGGGCTGGTGAACACAGAGTGTGCAAAGTGGGAAAGCCAAGGCG 505 | || | | |||||||||||||||||||||||| ||||||||| |||| | Sbjct 502 A-AG----G------A---GCTGGTGAACACAGAGTGTGCAAAATGGGAAAGCAAAGGTG 547 Query 506 TAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGGCTATAAAGCCGGAGCTCTTAAAC 565 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 548 TAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGGCTACAAAGCCGGAGCTCTTAAAG 607 Query 566 AAGGCATGAAGCACAACTACGTGAAGCTATGCAGA-TATGTTGTCATCTTTGACGCAGAC 624 ||||||||||||||||||||||||||||||||| | ||||| |||||||| ||||||||| Sbjct 608 AAGGCATGAAGCACAACTACGTGAAGCTATGCA-ATTATGTCGTCATCTTCGACGCAGAC 666 Query 625 TTTCAACCGGAGCCTGATTACCTCCAACGCTCTGTCCCCTTCCTCGTTCATAACCCCGAG 684 || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 667 TTCCAACCGGAGCCTGATTACCTCCAACACTCTGTCCCCTTCCTCGTTCATAACCCCGAG 726 Query 685 GTCGCTCTTGTTCAAGCCCGATGGAGATTCATGAACTCAAACAAGTGCTTGATGACGAGG 744 |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 727 GTCGCTCTGGTTCAAGCCCGATGGAGATTCATGAACGCAAACAAGTGCTTGATGACGAGG 786 Query 745 ATGCAAGAGATGTCCCTCAACTACCACTTCATGGCGGA-AATAGAATCTGGATCCACTAG 803 ||||||||||||||||||||||||||||| ||||| || | |||||||||||||||||| Sbjct 787 ATGCAAGAGATGTCCCTCAACTACCACTTTATGGCAGAGCA-AGAATCTGGATCCACTAG 845 Query 804 ACATGCCTTCTTTAGCTTCAATGGAACTGCGGGTGTATGGAGAATGGACGCAATGGAAGA 863 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 846 ACATGCCTTCTTTAGCTTCAATGGAACTGCGGGTGTATGGAGAATGGCCGCGATGGAAGA 905 Query 864 AGCTGGAGGATGGCATGACCGGACCACTGTAGAGGACATGGACTTGGCCGTTCGTGCTGG 923 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 906 AGCTGGAGGATGGCATGACCGGACTACTGTAGAGGACATGGACTTGGCCGTTCGTGCTGG 965 Query 924 TCTTCTCGGCTGGAAATTTGTCTTTCTCAATGACCTCACG 963 |||||||||||||||||||||||||||||||||||||||| Sbjct 966 TCTTCTCGGCTGGAAATTTGTCTTTCTCAATGACCTCACG 1005 > AT4G13410.1 | Symbols: ATCSLA15, CSLA15 | Nucleotide-diphospho-sugar transferases superfamily protein | chr4:7792219-7795824 REVERSE LENGTH=1614 Length=1614 Score = 621 bits (336), Expect = 4e-177 Identities = 751/942 (80%), Gaps = 66/942 (7%) Strand=Plus/Plus Query 31 CTTGAAGCATCCGTTAATGGTGTGAGGATAAGCATCGA-CACAACATGGACACGAGAATT 89 ||| |||||||||| |||||||| |||||| ||| || ||| | ||| | ||||| Sbjct 82 CTTAAAGCATCCGTGGATGGTGTGGGGATAAACAT-GAGCACTATGTGG--A-GAGAAAC 137 Query 90 GAGGAGCT-TCCTT-ATAGTTCCCTTATTCAAGTGTTTGGTGGCTCTTTGTTTGATAATC 147 |||| | | || |||||||| || ||||||||| | |||| | | |||||||| ||| Sbjct 138 AAGGA-ATGT-ATTCATAGTTCCATTGTTCAAGTGTATAGTGGTTATGTGTTTGATCATC 195 Query 148 TCCCTCTTAGTTTTCATAGAGGGTATATACATGAACCTTGTAGTGCTCTACGTCAAGTTG 207 || |||||||||||| | ||| || | ||||||||||||||||| ||||| ||||||||| Sbjct 196 TCGCTCTTAGTTTTCGTTGAGAGTGTTTACATGAACCTTGTAGTACTCTATGTCAAGTTG 255 Query 208 TTTAAGCGAAAACCCGA-AAAATCTACAAATAGGAGCCGATGCCGGAGGACATTGAGCTC 266 ||||| |||||||| || ||| ||||||||| |||| | |||| |||||| || ||||| Sbjct 256 TTTAACCGAAAACCAGAGAAAGTCTACAAATGGGAGGCAATGCAGGAGGATATGGAGCTT 315 Query 267 GGACATGAAACCTACCCCATGGTCCTTGTTCAAATTCCAATGTACAACGAAAAAGAGGTA 326 || ||| ||| || || ||||||||||||||||| ||||||||||||||| ||||| Sbjct 316 GGTCATCAAAATTATCCGATGGTCCTTGTTCAAATCCCAATGTACAACGAACGAGAGG-- 373 Query 327 TATCTACATGTATTCAGTCCTTCAATTATCTATAGGTGCTGCATGTAGACTAATC-TGGC 385 | | | || | ||||||||||||||||||| || ||||||| | |||| Sbjct 374 ----T-C---T-TT--G------AATTATCTATAGGTGCTGCGTGCAGACTAA-CATGGC 415 Query 386 CATTGGACCGCCTAATTGTTCAAGTTCTAGATGATTCCACTGATCAAACCATCAAGAAGT 445 ||| |||||| ||||||||||||||| ||||||||||||| ||| | | || | Sbjct 416 CATCGGACCGTCTAATTGTTCAAGTTTTAGATGATTCCACCGAT-----C--C-AGCA-- 465 Query 446 ATAGAACTGAATTTCAGGGGCTGGTGAACACAGAGTGTGCAAAGTGGGAAAGC-CAAGGC 504 || | | | || ||||||| || || ||| |||| |||| | | ||| | Sbjct 466 AT----C---A--T--GGAACTGGTGAGCATGGAATGTACAAAATGGG-CATCAAAAGAC 513 Query 505 GTAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGGCTATAAAGCCGGAGCTCTTAAA 564 |||||||||| | ||||||| |||| |||||||||||||| || || ||||||||||| Sbjct 514 ATAAATATAAATTATGAGAGGCGAGAGAACAGAAATGGCTACAAGGCTGGAGCTCTTAAG 573 Query 565 CAAGGCATGAAGCACAACTACGTGAAGCTA-TG-CAGATATGTTGTCATCTTTGACGCAG 622 || ||||||| ||||| ||||| |||| | || || |||| ||| ||||||||| || | Sbjct 574 CACGGCATGAGGCACAGTTACGTCAAGC-AGTGCCA-ATATCTTGCCATCTTTGATGCTG 631 Query 623 ACTTT-CAACCGGAGCCTGATTACCTCCAACGCTCTGTCCCCTTCCTCGTTCATAACCCC 681 | ||| || || ||||| ||||||||||||||| || ||||||| || | || ||||| Sbjct 632 A-TTTCCAGCCCGAGCCCGATTACCTCCAACGCGCTATCCCCTTTCTTATCCACAACCCT 690 Query 682 GAGGTCGCTCTTGTTCAAGCCCGATGGAGATTCATGAACTCAAACA-AGTGCTTGATGAC 740 |||||||||||||| ||||| ||||||||||| | ||| | |||| | ||||| ||||| Sbjct 691 GAGGTCGCTCTTGTCCAAGCTCGATGGAGATTTGTAAACGCTAACACA-TGCTTAATGAC 749 Query 741 GAGGATGCAAGAGATGTCCCTCAACTACCACTTCATGGCGGA-AATAGAATCTGGATCCA 799 |||||||||||||||||| || |||||||| |||||||| || | | |||||||||||| Sbjct 750 GAGGATGCAAGAGATGTCTCTGAACTACCATTTCATGGCAGAGCA-ACAATCTGGATCCA 808 Query 800 CTAGACATGCCTTCTTTAGCTTCAATGGAACTGCGGGTGTATGGAGAATGGACGCAATGG 859 | |||||||| |||||| |||| |||||||||||||| ||||||||||||| || |||| Sbjct 809 CAAGACATGCTTTCTTTGGCTTTAATGGAACTGCGGGAGTATGGAGAATGGTGGCGATGG 868 Query 860 AAGAAGCTGGAGGATGGCATGACCGGACCACTGTAGAGGACATGGACTTGGCCGTTCGTG 919 ||||||||||||||||| | |||||||| || |||||||||||||||||||||||||||| Sbjct 869 AAGAAGCTGGAGGATGGAAGGACCGGACGACGGTAGAGGACATGGACTTGGCCGTTCGTG 928 Query 920 CTGGTCTTCTCGGCTGGAAATTTGTCTTTC-TCAATGACCTC 960 |||||||||||| ||||||||| |||| | ||||||||||| Sbjct 929 TTGGTCTTCTCGGTTGGAAATTTATCTT-CGTCAATGACCTC 969 > AT5G16190.1 | Symbols: ATCSLA11, CSLA11 | cellulose synthase like A11 | chr5:5283550-5286293 REVERSE LENGTH=1445 Length=1445 Score = 468 bits (253), Expect = 5e-131 Identities = 567/710 (80%), Gaps = 56/710 (8%) Strand=Plus/Plus Query 252 GAGGACATT-GAGCTCGGACATGAAACCTACCCCATGGTCCTTGTTCAAATTCCAATGTA 310 |||||| || ||||||||| || ||| || |||||||| ||||| ||||| |||||||| Sbjct 7 GAGGAC-TTGGAGCTCGGAAATCAAAACTTTCCCATGGTTCTTGTCCAAATCCCAATGTA 65 Query 311 CAACGAAAAAGAGGTATATCTACATGTATTCAGTCCTTCAATTATCTATAGGTGCTGCAT 370 ||||||| |||||| | | || | | || | | | | | | | |||||||| | Sbjct 66 CAACGAACGAGAGGTGT-T-TA-A-G--TT-A-T-C--C----A--T-T-GGTGCTGCTT 106 Query 371 GTAGACTAATCTGGCCATTGGACCGCCTAATTGTTCAAGTTCTAGATGATTCCACTGATC 430 | ||||| || ||||||||||| || ||||| ||||||||| |||||||||||||||||| Sbjct 107 GCAGACTCATATGGCCATTGGATCGACTAATCGTTCAAGTTTTAGATGATTCCACTGATC 166 Query 431 AAACCATCAAGAAGTATAGAACTGAATTTCAGGGGCTGGTGAA-CACAGAGTGTGCAAAG 489 |||||| || | ||| | |||| || ||||||||||| ||| Sbjct 167 CCACCATC-------AT-G----GAA----A-----TGGT-AAGCACAGAGTGTGGAAAA 204 Query 490 TGGGAAAGCC-AAGGCGTAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGGCTATAA 548 |||| || || ||||| |||| ||||| ||||||||||||||||| |||||||||||||| Sbjct 205 TGGGCAA-CCAAAGGCATAAACATAAAATGTGAGAGGAGAGACAATAGAAATGGCTATAA 263 Query 549 AGCCGGAGCTCTTAAACAAGGCATGAAGCACAACTACGT-GAAGCTATGCAGATATGTTG 607 || ||||||||||||||||| |||| ||| | ||||| || | ||||| || ||| Sbjct 264 GGCTGGAGCTCTTAAACAAGGTATGAGGCATAGTTACGTCAAAAC-ATGCACCTACATTG 322 Query 608 TC-ATCTTTGACGCAGACTTTCAACCGGAGCCTGATTACCTCCAACGCTCTGTCCCCTTC 666 | ||||| || || || ||||| || ||||| || |||||| ||||| ||||||| || Sbjct 323 -CAATCTTCGATGCTGATTTTCAGCCAGAGCCCGACTACCTCGAACGCACTGTCCCATTT 381 Query 667 CTCGTTCATAACCCCGAGGTCGCTCTTGTTCAAGCCCGATGGAGATTCATGAACTCAAAC 726 || | || || ||||| |||||||||||||||| ||||||| ||| ||||| |||| Sbjct 382 CTTATCCACAATCCCGAACTCGCTCTTGTTCAAGCTCGATGGAAATTTGTGAACGCAAAG 441 Query 727 AAGTGCTTGATGACGAGGATGCAAGAGATGTCCCTCAACTACCACTTCATGGCGGA-AAT 785 |||||||||||||| |||||||| |||||||||||||| ||||| |||| ||| || | Sbjct 442 AAGTGCTTGATGACTAGGATGCAGGAGATGTCCCTCAATTACCATTTCACGGCAGAGCA- 500 Query 786 AGAATCTGGATCCACTAGACATGCCTTCTTTAGCTTCAATGGAACTGCGGGTGTATGGAG 845 |||||| |||||||||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct 501 AGAATCCGGATCCACTAGACATGCCTTCTTTGGCTTTAATGGGACTGCGGGTGTATGGAG 560 Query 846 AATGGAC-GCAATGGAAGAAGCTGGAGGATGGCATGACCGGACCACTGTAGAGGACATGG 904 | ||| | || |||||||||||||| || ||| | ||||||||||| ||||||||||||| Sbjct 561 ACTGG-CGGCGATGGAAGAAGCTGGTGGTTGGAAAGACCGGACCACCGTAGAGGACATGG 619 Query 905 ACTTGGCCGTTCGTGCT-GGTCTTCTCGGCTGGAAATTTGTCTTTCTCAA 953 ||||||||||||||| | ||||| | ||||||||||||||||||| |||| Sbjct 620 ACTTGGCCGTTCGTG-TAGGTCTACACGGCTGGAAATTTGTCTTTGTCAA 668 > AT4G16590.1 | Symbols: ATCSLA01, CSLA01, ATCSLA1 | cellulose synthase-like A01 | chr4:9345150-9349221 FORWARD LENGTH=1907 Length=1907 Score = 374 bits (202), Expect = 1e-102 Identities = 398/491 (81%), Gaps = 20/491 (4%) Strand=Plus/Plus Query 483 TGCAAAGTGGGAAAGCCAAGGCGTAAATATAAAGTGTGAGAGGAGAGACAACAGAAATGG 542 |||||| ||| ||||||||||| |||| |||| |||||| |||||||| ||||| || || Sbjct 594 TGCAAAATGGCAAAGCCAAGGCATAAACATAAGGTGTGAAAGGAGAGATAACAGGAACGG 653 Query 543 CTATAAAGCCGGAGCTCTTAAACAAGGC-ATGAAGCACAACTACGTGAAGCTATGCAGA- 600 ||| |||||||||||| | ||| || || | | ||| | |||||| |||| |||| || Sbjct 654 CTACAAAGCCGGAGCTATGAAAGAA-GCTCTTACGCAGAGCTACGTCAAGCAATGC-GAC 711 Query 601 TAT-GTTGTCA-TCTTTGACGCAGACTTT-CAACCGGAGCCTGATTACCTCCA-ACGCTC 656 | | || | || |||| || || || ||| ||||| ||||| ||||| || || ||| | Sbjct 712 T-TCGTAG-CAGTCTTCGATGCTGA-TTTCCAACCCGAGCCCGATTATCT-CATCCGCGC 767 Query 657 TGTCCCCTTCCTCGTTCATAACCCCGAGGTCGCTCTTGTTCAAGCCCGATGGAGATTCAT 716 |||||| ||||| || || ||||| || || ||||| |||||||||||||||| ||| | Sbjct 768 TGTCCCTTTCCTTGTCCACAACCCTGACGTTGCTCTAGTTCAAGCCCGATGGATATTTGT 827 Query 717 GAACTCAAACAAGTGCTTGATGACGAGGATGCAAGAGATGTCCCTCAACTACCACTTCAT 776 ||| | ||||| ||||||||||||||||||||||||||||| |||||||| || |||| Sbjct 828 TAACGCGAACAAATGCTTGATGACGAGGATGCAAGAGATGTCTCTCAACTATCATTTCAA 887 Query 777 GGCGGAA-ATAGAATCTGGATCCACTAGACATGCCTTCTTTAGCTTCAATGGAACTGCGG 835 | |||| | |||||| || || ||||||||||| ||||| | || |||||||| |||| Sbjct 888 AGTGGAACA-AGAATCAGGGTCGACTAGACATGCTTTCTTCGGGTTTAATGGAACCGCGG 946 Query 836 GTGTATGGAGAATGGACG-CAATGGAAGAAGCTGGAGGATGGCA-TGACCGGACCACTGT 893 ||||||||||||| || ||||||||| ||| ||||||||| | | | ||||||| || Sbjct 947 GTGTATGGAGAATAT-CGGCAATGGAAGCAGCAGGAGGATGGAAATCAA-GGACCACAGT 1004 Query 894 AGAGGACATGGACTTGGCCGTTCGTGCTGGTCTTC-TCGGCTGGAAATTTGTCTTTCTCA 952 |||||||||||||||||| ||||||| |||||||| | |||||||||||||||| || | Sbjct 1005 AGAGGACATGGACTTGGCTGTTCGTGTTGGTCTTCAT-GGCTGGAAATTTGTCTACCTTA 1063 Query 953 ATGACCTCACG 963 | ||||||||| Sbjct 1064 ACGACCTCACG 1074 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47421034768 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5