BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg905917
Length=2259
Score E
Sequences producing significant alignments: (Bits) Value
AT2G05920.1 | Symbols: | Subtilase family protein | chr2:22695... 3472 0.0
> AT2G05920.1 | Symbols: | Subtilase family protein | chr2:2269515-2272229
REVERSE LENGTH=2603
Length=2603
Score = 3472 bits (1880), Expect = 0.0
Identities = 2139/2263 (95%), Gaps = 22/2263 (1%)
Strand=Plus/Plus
Query 5 cttcttcttcctccatcac---catcaccaccttcctcttcctcttcctcctccacacca 61
||||||||||||||||||| |||||||||||||||||| | ||| ||||||||||| |
Sbjct 39 CTTCTTCTTCCTCCATCACAATCATCACCACCTTCCTCTT-C-CTT-CTCCTCCACACAA 95
Query 62 ccGCCaaaaaaaCCTACATCATCCGCGTCAAACACTCCGATAAACCGGAATCATTCCTCA 121
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 96 CCGCCAAAAAAACCTACATCATCCGCGTCAATCACTCCGATAAACCGGAATCATTCCTCA 155
Query 122 CTCACCACGATTGGTACACATCCCAACTCCAA-TCACAATCTTCTCTTCTCTACACTTAC 180
|||||||||||||||||||||| ||||| ||| ||| |||| ||||||||||||||||||
Sbjct 156 CTCACCACGATTGGTACACATCTCAACT-CAATTCAGAATCATCTCTTCTCTACACTTAC 214
Query 181 ACAACCTCCTTCCATGGCTTCTCCGCTTACCTCGACTCCAACGAAGCCGATTCTCT-C-C 238
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |
Sbjct 215 ACAACCTCCTTCCATGGCTTCTCCGCTTACCTCGACTCCACCGAAGCCGATTCTCTCCTC 274
Query 239 T-CTCCTCAAATTCAATCCTCGATATCTTCGAAGATCCTCTCTACACACTTCACACAACT 297
| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 275 TCCTCCTCAAACTCAATCCTCGATATCTTCGAAGATCCTCTCTACACACTTCACACTACG 334
Query 298 CGTACACCTGAATTTCTCGGTCTCAATTCCGAATTCGGTGTCTACTCTGGTCAAGATCTT 357
||||| ||||| |||||||||||||||||||||||||||| | ||| |||||
Sbjct 335 CGTACTCCTGAGTTTCTCGGTCTCAATTCCGAATTCGGTG-------T--TCACGATCTC 385
Query 358 GCTTCTGCTTCTAATGGCGTTATCATCGGAGTTTTAGATACTGGTGTTTGGCCTGAATCT 417
| |||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 386 GGTTCTTCTTCTAACGGCGTTATCATCGGAGTTTTAGATACTGGCGTTTGGCCTGAATCT 445
Query 418 AAAAGTTTTGATGATACTGATATGCCTGAGATTCCTTCTAAATGGAAAGGTGAATGTGAA 477
| ||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 446 AGAAGCTTCGATGATACTGATATGCCTGAGATTCCTTCTAAATGGAAAGGAGAATGTGAA 505
Query 478 TCTGGCTCCGATTTCGATTCGAAGTTGTGTAACAAGAAGCTAATCGGAGCTAGAAGCTTC 537
||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 506 TCTGGTTCCGATTTCGATTCCAAGTTGTGTAACAAGAAGCTTATCGGAGCTAGAAGCTTC 565
Query 538 TCCAAAGGATTTCAAATGGCGTCAGGAGGTGGTTTTTCGAGTAAACGTGAATCTGTTTCT 597
|||||||||||||||||||| || || ||||||||||||||||| |||||||||||||||
Sbjct 566 TCCAAAGGATTTCAAATGGCTTCTGGTGGTGGTTTTTCGAGTAAGCGTGAATCTGTTTCT 625
Query 598 CCTCGTGATGTTGATGGACATGGAACACATACTTCAACAACCGCCGCTGGATCTGCCGTT 657
|||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||
Sbjct 626 CCTCGTGATGTTGACGGACATGGAACACATACTTCAACTACCGCCGCGGGATCCGCCGTT 685
Query 658 GGAAACGCTAGTTTCCTCGGTTACGCCGCCGGTACGGCCAGAGGTATGGCGACTCATGCT 717
|||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 686 AGAAACGCTAGCTTCCTCGGTTACGCCGCCGGTACGGCCAGAGGTATGGCCACTCGTGCT 745
Query 718 CGTGTTGCTACTTATAAAGTTTGTTGGAGTAGTGGTTGTTTTGGATCTGATATTCTAGCT 777
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 746 CGTGTTGCTACTTATAAAGTTTGTTGGAGTACTGGTTGTTTTGGATCTGATATACTAGCT 805
Query 778 GCTATGGATCGAGCTATACTTGATGGTGTTGATGTGCTTTCGTTATCTCTTGGTGGTGGT 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 806 GCTATGGATCGAGCTATACTTGATGGTGTTGATGTGCTTTCGTTATCTCTTGGTGGTGGT 865
Query 838 TCGGCTCCGTATTATCGCGATACGATTGCGATTGGATCGTTTTCGGCTATGGAGAGAGGT 897
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 866 TCTGCTCCGTATTATCGCGATACGATTGCGATTGGAGCGTTTTCGGCTATGGAGAGAGGT 925
Query 898 GTTTTTGTGTCTTGTTCAGCTGGGAATAGTGGTCCGACTAGAGCTTCTGTTGCTAATGTT 957
||||||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct 926 GTTTTTGTGTCTTGTTCTGCTGGTAATAGTGGTCCTACTAGAGCTTCTGTTGCCAATGTT 985
Query 958 GCTCCTTGGGTTATGACTGTTGGTGCTGGGACTTTAGATAGAGATTTTCCGGCTTTTGCG 1017
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 986 GCTCCTTGGGTTATGACTGTTGGTGCTGGTACTTTAGATAGAGATTTTCCGGCTTTTGCG 1045
Query 1018 AATCTCGGTAACGGGAAAAGACTTACCGGTGTTTCGCTTTATAGCGGTGTAGGAATGGGG 1077
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 1046 AATCTCGGTAACGGGAAACGACTTACCGGTGTTTCGCTGTATAGCGGTGTAGGAATGGGG 1105
Query 1078 ACGAAACCGCTTGAGTTGGTTTATAATAAAGGGAATAGTAGTTCGAGTAATCTTTGTTTA 1137
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1106 ACGAAGCCGCTTGAATTGGTTTATAATAAAGGGAATAGTAGTTCGAGTAATCTTTGTTTA 1165
Query 1138 CCTGGTTCGCTTGATTCGGGTATTGTTCGTGGTAAAATCGTTGTTTGTGATCGAGGTGTG 1197
|||||||||||||||||| ||||||||||||| || || |||||||||||| |||||||
Sbjct 1166 CCTGGTTCGCTTGATTCGAGTATTGTTCGTGGGAAGATTGTTGTTTGTGATAGAGGTGTT 1225
Query 1198 AATGCTAGAGTTGAGAAAGGGGCTGTGGTGAGAGATGCTGGTGGTTTGGGGATGATAATG 1257
|||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct 1226 AATGCTAGAGTTGAGAAAGGAGCTGTGGTTAGAGATGCTGGTGGTTTAGGGATGATAATG 1285
Query 1258 GCGAATACTGCGGCGAGTGGAGAGGAGCTTGTGGCGGATAGTCATTTGCTTCCGGCGATT 1317
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1286 GCGAATACTGCTGCGAGTGGAGAGGAGCTTGTGGCGGATAGTCATTTGCTTCCCGCGATC 1345
Query 1318 GCTGTAGGGAAGAAGACTGGTGATTTACTTAGGGAGTATGTTAAGTCAGATTCTAATCCA 1377
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1346 GCTGTAGGGAAGAAGACTGGTGATTTACTTAGGGAGTATGTTAAGTCAGATTCTAAACCA 1405
Query 1378 ACGGCTGTTCTTGTTTTTAAAGGAACTATTCTTGATGTTAAGCCGTCTCCTGTGGTTGCT 1437
|| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct 1406 ACCGCTCTTCTTGTTTTTAAAGGAACGGTTCTTGACGTTAAGCCGTCTCCTGTGGTTGCT 1465
Query 1438 GCTTTTAGCTCGAGAGGTCCAAATACTGTTACTCCTGAAATCTTGAAACCTGATGTTATT 1497
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 1466 GCTTTTAGCTCGAGAGGTCCTAATACTGTTACTCCTGAAATCTTGAAGCCTGATGTTATT 1525
Query 1498 GGTCCTGGAGTTAACATCTTGGCTGGTTGGTCTGATGCTATTGGTCCTACTGGTCTTGAG 1557
|||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||
Sbjct 1526 GGTCCTGGAGTTAATATTTTGGCTGGTTGGTCTGACGCTATTGGTCCTACTGGTCTTGAC 1585
Query 1558 AAGGACTCGAGGAGGACTCAGTTCAACATCATGTCAGGTACGTCAATGTCATGCCCACAC 1617
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1586 AAGGACTCTAGGAGGACTCAGTTCAACATCATGTCAGGTACGTCAATGTCATGCCCACAC 1645
Query 1618 ATCAGTGGTTTAGCTGGTCTTTTGAAAGCAGCTCACCCTGAGTGGAGTCCAAGTGCTATC 1677
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1646 ATCAGTGGTTTAGCGGGTCTTTTGAAAGCAGCTCACCCTGAGTGGAGTCCGAGTGCTATC 1705
Query 1678 AAATCAGCCCTCATGACCACAGCATACGTTCTTGACAACACCAACGCCCCTCTCCATGAT 1737
|||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 1706 AAATCAGCTCTCATGACTACAGCTTACGTTCTTGACAACACCAACGCTCCTCTCCATGAT 1765
Query 1738 GCTGCAGACAACAGCCTCTCTAACCCACATGCTCATGGCTCGGGCCATGTAGATCCTCAA 1797
||||||||||||||||| ||||||||| ||||||| |||||||||||||||||||| |||
Sbjct 1766 GCTGCAGACAACAGCCTATCTAACCCATATGCTCACGGCTCGGGCCATGTAGATCCCCAA 1825
Query 1798 AAGGCTCTCTCACCGGGTCTTGTCTACGATATCTCCACCGAGGAATACATCAGGTTCTTG 1857
|||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| |||
Sbjct 1826 AAGGCTCTCTCACCAGGTCTTGTCTACGACATCTCAACCGAGGAATACATCAGGTTTTTG 1885
Query 1858 TGCTCTCTAGACTACACAGTAGATCACATTGTTGCTATTGTGAAGCGACCTAGCGTCAAC 1917
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||
Sbjct 1886 TGCTCTCTAGACTACACAGTCGATCACATTGTTGCGATTGTGAAGCGACCTAGCGTTAAC 1945
Query 1918 TGCTCAAAGAAGTTCTCTGATCCTGGTCAGCTCAACTACCCAAGTTTCTCGGTTTTGTTT 1977
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1946 TGCTCGAAGAAGTTCTCAGATCCTGGTCAGCTCAACTACCCAAGTTTCTCGGTTTTGTTT 2005
Query 1978 GGGGGTAAAAGAGTTGTGCGGTACACTCGGGAAGTAACAAATGTGGGTGCAGCAAGCTCG 2037
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2006 GGGGGTAAAAGAGTTGTGCGGTACACTCGGGAAGTAACAAATGTTGGTGCAGCAAGCTCG 2065
Query 2038 GTTTACAAAGTGACGGTTAATGGAGCTCCTAGTGTTGCGA-TCTCAGTTAAACCATCAAA 2096
||||||||||||||||||||||||||||||||||| | || |||| ||||||||||| ||
Sbjct 2066 GTTTACAAAGTGACGGTTAATGGAGCTCCTAGTGTCG-GAATCTCTGTTAAACCATCGAA 2124
Query 2097 ACTTGCGTTTAGAAGCGCGGGAGAGAAGAAGAGGTACACAGTCACGTTTGTTAGCAAGAA 2156
|||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2125 ACTTTCGTTTAAAAGCGTGGGAGAGAAGAAGAGGTACACAGTCACGTTTGTTAGCAAGAA 2184
Query 2157 AGGAGTGAGTATGACGAACAAGGCTGAGTTTGGATCCATCACTTGGAGCAATCCGCAGCA 2216
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2185 AGGAGTGAGTATGACGAACAAGGCTGAGTTTGGTTCCATCACTTGGAGCAATCCGCAGCA 2244
Query 2217 CGAAGTTAGAAGTCCCGTTGCATTCTCTTGGAACCGGTTTTGA 2259
|||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2245 CGAAGTGAGAAGTCCCGTTGCATTCTCTTGGAACCGGTTTTGA 2287
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112097816985
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5