BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg906998 Length=1107 Score E Sequences producing significant alignments: (Bits) Value AT1G64150.1 | Symbols: | Uncharacterized protein family (UPF00... 1685 0.0 > AT1G64150.1 | Symbols: | Uncharacterized protein family (UPF0016) | chr1:23808909-23812677 REVERSE LENGTH=1349 Length=1349 Score = 1685 bits (912), Expect = 0.0 Identities = 1049/1115 (94%), Gaps = 10/1115 (1%) Strand=Plus/Plus Query 1 ATGCTAAGTTTGAATCTCTCCGAGTCGCTTCGCATTCCATTTCAAAACCCTAGGCCTCCC 60 |||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||| Sbjct 99 ATGCTAAGTTTGAATCTCTCGGAGTCGCTTCGCATTCCATTCCAGAACCCTAGGCCTCCC 158 Query 61 AAATTCGA---TTC-T-T-GTTGTTCTTCTCCTTCCTCATCGTCGAGGAGATGCGTCTCC 114 |||| ||| ||| | | || ||||||||||||||||||||||||||||||||||||| Sbjct 159 AAATCCGATTTTTCTTCTACTTCTTCTTCTCCTTCCTCATCGTCGAGGAGATGCGTCTCC 218 Query 115 GCTTGTCCAATTCCGATAGGGTTTTCGTTTCGTAATCAATACTTCTCTAGAGGTTTGACT 174 |||| |||||||||||| ||||||||| |||||||||||||||| |||||| |||||||| Sbjct 219 GCTTATCCAATTCCGATCGGGTTTTCGGTTCGTAATCAATACTTTTCTAGATGTTTGACT 278 Query 175 CAATTGCGTCGAAATGAATCTCAGCAGCTTGAATTTCGATGCTTCCGACGAAATGATTCC 234 ||||||||||||||||||||||||||||| | ||||||||||||| |||||| ||| | Sbjct 279 CAATTGCGTCGAAATGAATCTCAGCAGCTAGGTTTTCGATGCTTCCAACGAAACGATGCG 338 Query 235 GCTTGTTACCTTGAGAAGGCTGAATCTGAAGAAAAT-ATTAGAAATCGTGATGTTTTGGT 293 ||||||||||| ||||| ||||| |||||||| || | |||||||| ||||||| |||| Sbjct 339 GCTTGTTACCTCGAGAAAGCTGAGTCTGAAGAGCATGA-TAGAAATCTTGATGTTCTGGT 397 Query 294 TGAGTCATCGGTAGCTCACTCAAGAAGAGAGACTCTTAGACTTCTTAAGTTCTTGGCGGT 353 |||||||||| ||||||||||||||||||||| || ||| |||||| |||||||||||| Sbjct 398 TGAGTCATCGATAGCTCACTCAAGAAGAGAGATTCAGAGAGTTCTTATGTTCTTGGCGGT 457 Query 354 ATCAGGTTCGGTTGCATTACTCGGCAATGATCCAGCTTTTGCGGCTTCGTCAATTGCCAA 413 ||||||||||||||||||||| |||| ||||||||||||||| |||||||||||| |||| Sbjct 458 ATCAGGTTCGGTTGCATTACTAGGCACTGATCCAGCTTTTGCAGCTTCGTCAATTCCCAA 517 Query 414 TGGGACGCAGTCACTTGTCACTTCTCTTGGAGACCTTGGAGATATTAGCTCAGGTTTTGC 473 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 518 TGTGACACAGTCACTTGTCACTTCTTTTGGAGACCTTGGAGATATTAGCTCAGGTTTTGC 577 Query 474 TTCGGCGTTT-TTGCTTATATTTTTCTCTGAACTTGGGGACAAGACTTTCTTCATTGCGG 532 |||||| ||| |||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 578 TTCGGC-TTTCTTGCTTATCTTTTTCTCTGAACTTGGAGACAAGACTTTCTTCATTGCGG 636 Query 533 CTCTTTTAGCAGCAAGGAACTCTGCTGCTACCGTATTCGTGGGGACTTTTGGCGCTCTAG 592 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 637 CCCTTTTAGCAGCAAGGAACTCTGCTGCTACCGTATTCGTGGGGACTTTTGGCGCTCTAG 696 Query 593 GGATAATGACGATTATATCTGTAGTGCTTGGACGTACTTTCCACTACGTCGATGAAGTTC 652 ||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 697 GGATAATGACGATAATATCTGTAGTGCTTGGACGCACTTTCCACTATGTCGATGAAGTTC 756 Query 653 TTCCGTTCAGGTTTGGTGAAACCGATTTGCCTATAGATGATATTGCAGCAGTTTGTCTTC 712 |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 757 TTCCATTCAGGTTTGGTGGAACCGATTTGCCTATAGATGATATTGCAGCAGTTTGTCTTC 816 Query 713 TGGTTTACTTCGGTGTTTCAACGTTATTAGACGCTGTTTCGGACGAGGGTAAAGCTGACG 772 |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 817 TGGTGTACTTCGGTGTTTCAACGTTATTAGATGCTGTTTCAGACGAGGGTAAAGCTGACG 876 Query 773 AAGAACAGAAAGAAGCAGAACTAGCGGTTTCAGAGCTTTCAGGTAGTGGAGCCGGGATAG 832 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 877 AAGAACAGAAAGAAGCAGAACTAGCGGTTTCAGAGCTTTCAGGTAATGGAGCCGGGATAG 936 Query 833 TAGCAGCCGCGAACACCATCATCAGCACTTTCGCATTGGTTTTTGTTGCGGAATGGGGTG 892 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 937 TAGCAGCCGCGAACACCATCATCAGCACTTTCGCATTGGTTTTTGTTGCGGAATGGGGTG 996 Query 893 ACAAATCCTTCTTCTCAACAATTGCTCTTGCGGCTGCATCATCGCCATTGGGTGTCATCG 952 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 997 ACAAATCCTTCTTCTCAACAATTGCTCTTGCGGCTGCATCATCACCATTGGGTGTCATCG 1056 Query 953 CTGGAGCATTGGCGGGTCACGGTGCTGCGACTCTGCTTGCGGTATTGGGAGGTTCTTTGC 1012 ||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||||| Sbjct 1057 CTGGAGCGTTGGCGGGTCACGGTGCTGCGACTCTTCTTGCAGTATTGGGCGGTTCTTTGC 1116 Query 1013 TCGGAAATTTCTTATCAGAGAAGGCAATTGCTTATGTCGGAGGAGTTCTGTTTCTCGTGT 1072 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1117 TAGGAAATTTCTTATCAGAGAAGGCAATTGCTTATGTCGGAGGAGTTCTGTTTCTCGTGT 1176 Query 1073 TTGCTGCTGTGACGGTGGCTGAGATCGTTACGTAA 1107 ||||||||||||||||||||||||||||||||||| Sbjct 1177 TTGCTGCTGTGACGGTGGCTGAGATCGTTACGTAA 1211 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54266789145 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5