BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg907815 Length=492 Score E Sequences producing significant alignments: (Bits) Value AT5G27630.1 | Symbols: ACBP5 | acyl-CoA binding protein 5 | chr... 217 1e-55 AT2G45900.1 | Symbols: | Phosphatidylinositol N-acetyglucosami... 193 2e-48 > AT5G27630.1 | Symbols: ACBP5 | acyl-CoA binding protein 5 | chr5:9776023-9781002 FORWARD LENGTH=2247 Length=2247 Score = 217 bits (117), Expect = 1e-55 Identities = 140/151 (93%), Gaps = 2/151 (1%) Strand=Plus/Plus Query 246 CAAAGTTCAAGGAAAAGCCGAACGCATTATCACAACCCTTAAATTCGAAAAAGAAGAA-- 303 ||| ||| ||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct 1635 CAAGGTTGAAGGAAAAGCCGACCGCATTATCACAACCCTTAAATCCGAAAAAGAAGAAGT 1694 Query 304 GGAGACATCACTCAACAAGGAAAAGATACTAACTCTTCAACTAAAGGAAGAGTTAGCAGA 363 |||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct 1695 GGAGGCATCACTCAACAAGGAAAAGATACAAACTCTCCAACTAAAGGAAGAGTTAGCAGA 1754 Query 364 GATAGAGACACGAAATACAGAGTTGTACAAG 394 |||||| ||||||||||||||||| |||||| Sbjct 1755 GATAGACACACGAAATACAGAGTTATACAAG 1785 > AT2G45900.1 | Symbols: | Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related | chr2:18886069-18888674 REVERSE LENGTH=2163 Length=2163 Score = 193 bits (104), Expect = 2e-48 Identities = 122/130 (94%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 1 ATGTTTGACTTCAGACATGGTGGATCTAACCAGAAGCTTTTGATGGATAAGAAACGTGGA 60 |||||||| || ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 70 ATGTTTGATTTTAGACATGGTGGATCTAACCAGAAGCTTTTGATGGATAAGAAACGTCGA 129 Query 61 AGCAAAAG-A--ATCATAGGTAATAATGGAATGTTTGAGACTAAGGTTGAGAAGCAGCTT 117 ||||| || | |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 130 AGCAAGAGAATCATCATAGGTAATAATGGAGTGTTTGAGACTAAGGTTGAGAAGCAGCTT 189 Query 118 ACTTGTGACT 127 |||||||||| Sbjct 190 ACTTGTGACT 199 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23459346649 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5