BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg908906
Length=1122
Score E
Sequences producing significant alignments: (Bits) Value
AT1G72950.1 | Symbols: | Disease resistance protein (TIR-NBS c... 1557 0.0
AT1G72940.1 | Symbols: | Toll-Interleukin-Resistance (TIR) dom... 1020 0.0
AT1G72900.1 | Symbols: | Toll-Interleukin-Resistance (TIR) dom... 784 0.0
AT1G72920.1 | Symbols: | Toll-Interleukin-Resistance (TIR) dom... 780 0.0
> AT1G72950.1 | Symbols: | Disease resistance protein (TIR-NBS
class) | chr1:27444585-27445980 FORWARD LENGTH=1306
Length=1306
Score = 1557 bits (843), Expect = 0.0
Identities = 1049/1145 (92%), Gaps = 28/1145 (2%)
Strand=Plus/Plus
Query 1 ATGTCAGATACTTCAATTACCATCCCAAAGTTTGATGTTTTTCTGAGTTTCAGAGGACTC 60
||||||||| |||||| ||| ||||||||||||||||||||||||| ||||||||||||
Sbjct 1 ATGTCAGATTCTTCAAACACCCTCCCAAAGTTTGATGTTTTTCTGAGCTTCAGAGGACTC 60
Query 61 GACACTCGCCGCAACTTCATCAGTTTCCTCTACAACGAACTGGTCCGAAGAAACATTCGA 120
||||||||||||| ||||||||||||||||||||| |||||| | |||||||||||||||
Sbjct 61 GACACTCGCCGCAGCTTCATCAGTTTCCTCTACAAAGAACTGATTCGAAGAAACATTCGA 120
Query 121 A-CTTTCAAAGACGACAAGGAGTTGAAGAATGGCCGGAGGATTACGCCGGAGCTCGTACG 179
| |||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 121 ACCTTT-AAAGACGATAAGGAGTTGAAGAATGGCCGGAGGATTACGCCGGAGCTAATACG 179
Query 180 CGCCATCGAGGGGTCGAAATTCGCCGTCGTTGTGGTCTCTGTGAATTACGCTGCGTCTCG 239
|||||| || ||||||| |||||| |||||||||||||| ||||||||||||||||||||
Sbjct 180 CGCCATTGAAGGGTCGAGATTCGCAGTCGTTGTGGTCTCCGTGAATTACGCTGCGTCTCG 239
Query 240 TTGGTGTCTCGAGGAGCTCGTGAAGATCATGGATTTCGAAAACAAGGGATCGCTCAAGGT 299
|||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||||||
Sbjct 240 TTGGTGTCTCGAAGAGCTCGTGAAGATTATGGATTTCGAAAACATGGGCTCGCTCAAGGT 299
Query 300 GATGCCTATCTTCTACGGCGTAGATCCGTGTCATGTGAGGAGGCAGACCGGAGTAGTCGC 359
|||||||||||||||||||| |||||||||||||||||||| |||| ||||| ||||||
Sbjct 300 CATGCCTATCTTCTACGGCGTGGATCCGTGTCATGTGAGGAGACAGATCGGAGAAGTCGC 359
Query 360 TGAACAGTTTAAGAAGCATGAGGCTAGAGAAGGAGATCACGAGAAAGTGCTTTCATGGAG 419
||||||||||||||||||||||| ||||| | |||||| ||||||||||||||||||||
Sbjct 360 TGAACAGTTTAAGAAGCATGAGGGTAGAG-A--AGATCATGAGAAAGTGCTTTCATGGAG 416
Query 420 GCAAGCATTGACCAATTTGGCGAGTATCTCCGGCGATTGTTCATGGAAGTGGGAAGATGA 479
|||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 417 GCAAGCGTTGACTAATTTGGCGAGTATCTCCGGCGATTGTTCATGGAAATGGGAAGATGA 476
Query 480 CTCGAAGATGGTCGACGAAATTACTGACAGGATATCAAAAGAGCTGATGATTGATACAAC 539
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 477 CTCGAAGATGGTCGAAGAAATTACTGACAGGATATCAAAAGAGCTGATGATTGATACAAC 536
Query 540 AAGACGCAATGGGAGTGATCTTGAGGGGATTGCTGCACACATGAAAGCTCTTCACCGATT 599
|||| ||||||||||||| ||||| ||||||| |||||||||||||||||||||||| ||
Sbjct 537 AAGAAGCAATGGGAGTGACCTTGAAGGGATTGATGCACACATGAAAGCTCTTCACCGTTT 596
Query 600 ACTGAATTTGAATTCTAAGAAGAGTGTGAGAGTGATTGGGATTTGGGCAAGAGGATACAA 659
| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 597 ATTGAATTTAAATTCTAAGAAAAGTGTGAGAGTGATTGGGATTTGGGCAAGAGGAGGCAA 656
Query 660 TGGTAGATCGGCTCTAGCTAAATTTGTTTATCAGAACATCTGTCAACACTTTGAAAGCCA 719
||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 657 TGGTAGATCAGCTTTAGCTAAATTTGTTTATCAGAACATCTGTCAACACTTCGAAAGCCA 716
Query 720 TTGTTTCCTGGAAAGTGTGAAAAGGATTTCTCAGGATCGCC----GT-----------GA 764
||||||| ||||||||||||||||||||||||||||||||| || ||
Sbjct 717 TTGTTTCTTGGAAAGTGTGAAAAGGATTTCTCAGGATCGCCACCTGTCTCACTTACACGA 776
Query 765 AGAGTTAATGATACGGATTCA-GGAAGAATGCTTGAGCAAATT----C--AAGAACCAAA 817
|||||| |||||||||||||| ||| ||||||||||| ||||| | ||||||||||
Sbjct 777 AGAGTTTATGATACGGATTCAAGGA-GAATGCTTGAGTAAATTAAGGCTCAAGAACCAAA 835
Query 818 AGGTTCTGCTTGTTGCTGACGATGTCAATAAGCTTGAACAGTTAGATGCTCTTGCAGAGG 877
|||||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 836 AGGTTCTGCTCGTGGCTGATGATGTGAATAAGCTTGAACAGTTAGATGCTCTTGCAGAGG 895
Query 878 ACTTTAACTGTTTTGGTCCAGGGAGTATAGTTATCATCACTACACAAGACAAGCAGCTGC 937
|||||||||| |||||||| |||||||||||||| |||||||||||||||| ||||||||
Sbjct 896 ACTTTAACTGCTTTGGTCCTGGGAGTATAGTTATTATCACTACACAAGACAGGCAGCTGC 955
Query 938 TTATTTCTTCTGGCATAAAGCTTGTTTATGAAGTAGAGCTTCTGAGATTCCAGAAAGTTC 997
|||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 956 TTATCTCTGCTGGCATAAAACTTGTTTATGAAGTAGAGCTTCTCAGATTCCAGAAAGTTC 1015
Query 998 GTGGACTCTTCAGACAATTAGCCTTCAGAGAGAAAGACTTTTCTGCAGCGTTTGAGGTGT 1057
||||||||||||||||||||||||||| |||||||||| ||||||| ||||| |||||||
Sbjct 1016 GTGGACTCTTCAGACAATTAGCCTTCAAAGAGAAAGACATTTCTGCTGCGTTCGAGGTGT 1075
Query 1058 CTTTGGATAGGGCAACGAATGTTGCCATGGAATGGTTAGGTTGTCTATGTGGTAGATCTG 1117
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 1076 CTTTGTATAGGGCAACGAATGTTGCCATGGAATGGTTAGGTTGTATATGTGGTAGATCAG 1135
Query 1118 ATTAG 1122
||||
Sbjct 1136 GTTAG 1140
> AT1G72940.1 | Symbols: | Toll-Interleukin-Resistance (TIR) domain-containing
protein | chr1:27442238-27443856 FORWARD LENGTH=1525
Length=1525
Score = 1020 bits (552), Expect = 0.0
Identities = 888/1046 (85%), Gaps = 40/1046 (4%)
Strand=Plus/Plus
Query 28 AAGTTTGATGTTTTTCTGAGTTTCAGAGGACTCGACACTCGCCGCAACTTCATCAGTTTC 87
|||| |||||| |||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 62 AAGTATGATGTCTTTCTGAGTTTCAGAGGAGTCGACACTCGTCGCAACTTCATCAGTTTT 121
Query 88 CTCTACAACGAACTGGTCCGAA-GAAACATTCGAACTTTCAAAGACGACAAGGAG-TTGA 145
|||||||| ||| | || |||| |||| ||||||||||||||||||||||||||| |||
Sbjct 122 CTCTACAAAGAATTCGTTCGAAGGAAA-ATTCGAACTTTCAAAGACGACAAGGAGCTTG- 179
Query 146 AGAATGGCCGGAGGATTACGCCGGAGCTCGTACGCGCCATCGAGGGGTCGAAATTCGCCG 205
||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||||||
Sbjct 180 AGAATGGCCGGAGGATTTCTCCGGAGCTCAAACGCGCCATCGAGGAGTCGAAATTCGCCG 239
Query 206 TCGTTGTGGTCTCTGTGAATTACGCTGCGTCTCGTTGGTGTCTCGAGGAGCTCGTGAAGA 265
||||||| |||||||| || ||||||||||||| |||||||||||| ||||| |||||||
Sbjct 240 TCGTTGTTGTCTCTGTAAACTACGCTGCGTCTCCTTGGTGTCTCGATGAGCTTGTGAAGA 299
Query 266 TCATGGATTTCGAAAACAAGGGATCGC-TCAAGGTGATGCCTATCTTCTACGGCGTAGAT 324
| |||||||||||||||||||| || | ||| |||||||||||||||||||| || |||
Sbjct 300 TTATGGATTTCGAAAACAAGGGTTC-CATCACCGTGATGCCTATCTTCTACGGTGTGGAT 358
Query 325 CCGTGTCATGTGAGGAGGCAGACCGGAGTA-GTCGCTGAACAGTTTAAGAAGCATGAGGC 383
||||||||| |||||||||||| ||||| | ||||||||||||||||||||||| |||||
Sbjct 359 CCGTGTCATTTGAGGAGGCAGATCGGAG-ATGTCGCTGAACAGTTTAAGAAGCACGAGGC 417
Query 384 TAGAGAAGGAGATCACGAGAAAG-TGCTTTCATGGAGGCAAGCATTGACCAATTTGGCGA 442
|||||||| |||||| ||||||| ||| ||| ||||| | ||||||||||| |||||| |
Sbjct 418 TAGAGAAGAAGATCATGAGAAAGTTGC-TTCGTGGAGACGAGCATTGACCAGTTTGGCTA 476
Query 443 GTATCTCCGGCGATTGTTCATGGAAGTGGGAAGATGACTCGAAGATGGTCGACGAAATTA 502
|||||||||| |||||||||| || || |||||||| ||||| |||| |||||||||
Sbjct 477 GTATCTCCGGAGATTGTTCATCCAAATGTGAAGATGAAGCGAAGCTGGTGGACGAAATTG 536
Query 503 CTGACAGGATATCAAAAGAGCTGATGATTGATACAACAAGACGCAATGGG-AGTGATCTT 561
|||||| |||||||||| | ||||||| || |||||||| | |||||||| || | ||
Sbjct 537 CTGACAAGATATCAAAAAATCTGATGACTGTTACAACAATAAGCAATGGGAAG-AACCTA 595
Query 562 GAGGGGATTGCTGCACACATGAAAGCTCTTCACCGATTACTGAATTTGAATTCTAAGAAG 621
| ||||||| | |||||||||| |||||| || | |||| |||||||||| || ||
Sbjct 596 GTTGGGATTGATACACACATGAAGGCTCTTAACAAAAAACTGGATTTGAATTCCAACAAA 655
Query 622 AGTGTGAGAGTGATTGGGATTTGGGCAAGAGGATACAATGGTAGATCGGCTCTAGCTAAA 681
||| |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct 656 AGTTTGAGAGTGGTTGGGATTTGGGCAAGAGGATACAATGGTAGATCAGCTTTAGCTAAA 715
Query 682 TTTGTTTATCA-GAACATCTGTCAACACTTTGAAAGCCATTGTTTCCTGGAAAGTGTGAA 740
| ||||||||| || ||||||||| |||||||| |||||||||||| ||| ||| |||||
Sbjct 716 TATGTTTATCAAGA-CATCTGTCACCACTTTGACAGCCATTGTTTCTTGGGAAGCGTGAA 774
Query 741 AAGGATTTCTCAGGATCG-C-C-----G--T------GAAGAGTTAATGATACGGATTCA 785
|||||||||||||| ||| | | | | |||||||| ||||| |||||||
Sbjct 775 AAGGATTTCTCAGGGTCGTCACTTATCGCATCTACACGAAGAGTTTCTGATAAGGATTCA 834
Query 786 GGAAGAATGCTTGAGCA-AAT-TCAAGAACCAAAAGGTTCTGCTTGTTGCTGACGATGTC 843
| ||| | | | || ||| ||||| ||||||||||| ||||||| ||||| |||||
Sbjct 835 AG--GAA-G-TAAA-CATAATCTCAAGGACCAAAAGGTTTTGCTTGTGGCTGATGATGTT 889
Query 844 AATAAGCTTGAACAGTTAGATGCTCTTGCAGAGGACTTT-AACTGTTTTGGTCCAGGGA- 901
|||||||||||||||||||||||||||| ||||| ||| ||| | |||||||| ||||
Sbjct 890 TATAAGCTTGAACAGTTAGATGCTCTTGCTGAGGA-TTTCAACGGGTTTGGTCC-GGGAA 947
Query 902 GTATAGTTATCATCACTACACAAGACAAGCAGCTGCTTATTTCTTCTGGCATAAAGCTTG 961
|| | |||||||||||||||||||||||||| ||| || ||||| |||| ||||||||||
Sbjct 948 GTGTTGTTATCATCACTACACAAGACAAGCATCTGTTTGTTTCTGCTGGTATAAAGCTTG 1007
Query 962 TTTATGAAGTAGAGCTTCTGAGATTCCAGAAAGTTCGTGGACTCTTCAGACAATTAGCCT 1021
| || ||||| |||||| ||| ||||||||||||| ||| ||||||| ||||||| ||||
Sbjct 1008 TCTACGAAGTTGAGCTTTTGAAATTCCAGAAAGTTTGTGAACTCTTCCGACAATTCGCCT 1067
Query 1022 TCAGAGAGAAAGACTTTTCTGCAGCG 1047
| | | ||| |||| ||||||| |||
Sbjct 1068 TTAAAAAGAGAGACATTTCTGCTGCG 1093
> AT1G72900.1 | Symbols: | Toll-Interleukin-Resistance (TIR) domain-containing
protein | chr1:27432195-27433782 FORWARD LENGTH=1363
Length=1363
Score = 784 bits (424), Expect = 0.0
Identities = 878/1085 (81%), Gaps = 80/1085 (7%)
Strand=Plus/Plus
Query 34 GATGTTTTTCTGAGTTTCAGAGGACTCGACACTCGCCGCAACTTCATCAG-TTTCCTCTA 92
||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| |||||
Sbjct 52 GATGTTTTTCTGAGTTTCAGAGGACCCGACACTCGCCGCAAGTTCATCAGCTTT-CTCTA 110
Query 93 CAACGAACTGGTCCGAAGAAACATTCGAA-CTTTCAAAGACGACAAGGAG-TTGAAGAAT 150
||| ||||| || |||| ||||||||| |||| ||||||||||| ||| | | |||||
Sbjct 111 CAAAGAACTTGTTGGAAGGGACATTCGAACCTTT-AAAGACGACAAAGAGCTAG-AGAAT 168
Query 151 GGCCGGAGGATTACGCCGGAGCTCGTACGCGCCATCGAGGGGTCGAAATTCGCCGTCGTT 210
|||| || |||| | ||||||||| ||| ||||||||||| |||| ||| |||||||||
Sbjct 169 GGCCAGATGATTTCTCCGGAGCTCATACTCGCCATCGAGGATTCGAGATTTGCCGTCGTT 228
Query 211 GTGGTCTCTGTGAATTACGCTGCGTC-TCGTTGGTGTCTCGAGGAGCTCGTGAAGATCAT 269
|| ||||| ||||| ||||||||||| || |||||||||||| |||||||| ||||||||
Sbjct 229 GTTGTCTCCGTGAACTACGCTGCGTCTTC-TTGGTGTCTCGATGAGCTCGTAAAGATCAT 287
Query 270 GGAT-TTC-GAA-AACAAGGGATCGC-TCAAGGTGATGCCTATCTTCTACGGCGTAG-AT 324
|||| | | ||| |||||||| || | ||| ||||||||||||||||||||||| | ||
Sbjct 288 GGATATCCAGAAGAACAAGGGTTC-CATCACCGTGATGCCTATCTTCTACGGCGT-GAAT 345
Query 325 CCGTGTCATGTGAGGAGGCAGACCGGAGTA-GTCGCTGAACAGTTTAAGAAGCATGAGGC 383
||||||||| |||||||||| | ||||| | ||||||||||||||||||||||| |||||
Sbjct 346 CCGTGTCATTTGAGGAGGCAAATCGGAG-ATGTCGCTGAACAGTTTAAGAAGCACGAGGC 404
Query 384 TAGAGAAGGAGATCACGAGAAAGTGCTTTCATGGAGGCAAGCATTGACCAATTTGGCGAG 443
|||||| ||||| |||||||||||| |||||||||||| ||| || |||||| ||
Sbjct 405 AAGAGAAAAAGATCTTGAGAAAGTGCTTAAATGGAGGCAAGCGTTGGCCGCTTTGGC-AG 463
Query 444 -TATCTCCGGCGATTGTTCATGGAAGTGGGAAGATGACTCGAAGATGGTCGACGAAATTA 502
|||||||||||||||||| || ||||||||||||||||| |||| |||| |||
Sbjct 464 ATATCTCCGGCGATTGTTC-----AG-GGGAAGATGACTCGAAGCTGGTGGACGTAATCG 517
Query 503 CTGACAGGATATCAAAAGAGCTGATGATTGATACAACAAGACGCAATGGGAGTG-ATCTT 561
|||||| ||||||||||||||||||||| | ||||| || | |||||||||| | | ||
Sbjct 518 CTGACAAGATATCAAAAGAGCTGATGATAGTTACAAGAATAAGCAATGGGAG-GAACCTA 576
Query 562 GAGGGGATTGCTGCACACATGAAAGCTCTTCACCGATT-ACTGAATTTGAATTCTAA-GA 619
| ||||||| | ||||||||| | ||| ||||||| | || |||||||||| || |
Sbjct 577 GTTGGGATTGATAAACACATGAACGAACTTAACCGATTGA-TGGATTTGAATTCCAACAA 635
Query 620 AGAGTGTGAGAGTGATTGGGATTTGGGCAAGAGGATACAA-TGGTAGATCGGCTCTAGCT 678
|| || |||| || |||||||||||||||||||| || | |||||||||||||||||
Sbjct 636 AG-GTAAGAGAATGGTTGGGATTTGGGCAAGAGGA-GGAAGTTGTAGATCGGCTCTAGCT 693
Query 679 AAATTTGTTTATCAGAACAT-CTGTCAACACTTTGAAAGCCATTG-TTTCCTGGAAAGTG 736
|||| |||||||||| |||| ||||||||||||||| |||||||| |||| |||||| |
Sbjct 694 AAATATGTTTATCAG-ACATCCTGTCAACACTTTGATAGCCATTGTTTTCTTGGAAA-CG 751
Query 737 TGAAAAGGATTTCTCA-GG--A-T-C-------GCC--GT----GAAGAGTTAAT-GATA 777
||||| |||||| ||| || | | | ||| | ||||||| | ||||
Sbjct 752 TGAAACGGATTTGTCAGGGTAACTACTTTGAAAGCCATCTACACAAAGAGTTTCTGGATA 811
Query 778 CGGATTC-AGGAAGAATGCT-T-G--AGCAAA-T-TCAAGAACCAAAAGGTTCTGCTTGT 830
|||| ||| |||| || | | | |||| | ||||||| |||||||||||||||||
Sbjct 812 -ATATTCAAGG-AGAAAACTCTAGCAAACAAAGTCTCAAGAAGCAAAAGGTTCTGCTTGT 869
Query 831 TGCTGACGATGTCAATAAGCTTGAACAGTTAGATGCTCTTGCAGAGGACTTTAA-CTGTT 889
|| ||||| ||| |||||||||||||||||||||||||||||| ||| ||| | | |||
Sbjct 870 GGCAGACGACGTCGATAAGCTTGAACAGTTAGATGCTCTTGCAGGGGA-TTTCAGCGGTT 928
Query 890 TTGGTCCAGGGAGTATAGTTATCATCACTACACAAGACAAGCAGCTGCTT-ATTTCTTCT 948
||||||| |||||| | ||||||||||||||| |||| |||||| || || ||||||| |
Sbjct 929 TTGGTCCGGGGAGTGTTGTTATCATCACTACAAAAGATAAGCAGTTG-TTGATTTCTTAT 987
Query 949 GGCATAAAGCTTGTTTATGAAG-TAGAGCTTCTGAGATTCCAGAAAGTTCGTGG-ACTCT 1006
|| ||| ||||||| || |||| | ||| || ||| |||||||||| || || | | ||
Sbjct 988 GGTATACAGCTTGTCTACGAAGCT-GAGTTTTTGACATTCCAGAAATTTTGTCGTAG-CT 1045
Query 1007 TCAGA-CAATTAGCCTTCAGAGAGA-A-A-GACTTTTCTGCAGCGTTTGAG-GTGTCTTT 1061
|| || || || ||||| | | ||| | | ||| ||||||| ||||| ||| | | ||||
Sbjct 1046 TCCGATCA-TTGGCCTTTAAAAAGAGAGACGACATTTCTGCTGCGTTCGAGTGGG-CTTT 1103
Query 1062 GGATA 1066
| |||
Sbjct 1104 GTATA 1108
> AT1G72920.1 | Symbols: | Toll-Interleukin-Resistance (TIR) domain
family protein | chr1:27437928-27439091 FORWARD LENGTH=1070
Length=1070
Score = 780 bits (422), Expect = 0.0
Identities = 589/670 (88%), Gaps = 10/670 (1%)
Strand=Plus/Plus
Query 40 TTTCTGAGTTTCAGAGGACTCGACACTCGCCGCAACTTCATCAGTTTCCTCTACAACGAA 99
||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||
Sbjct 53 TTTCTGAGTTTCAGAGGACTCGACACTCGTCGCAACTTCATCAGTTTTCTCTACAAAGAA 112
Query 100 CTGGTCCGAAGAAACATTCGAACTTTCAAAGACGACAAGGAG-TTGAAGAATGGCCGGAG 158
|| || |||||||| ||||||||||||||||||||||||||| | | |||||||||||||
Sbjct 113 CTCGTTCGAAGAAAAATTCGAACTTTCAAAGACGACAAGGAGCTCG-AGAATGGCCGGAG 171
Query 159 GATTACGCCGGAGCTCGTACGCGCCATCGAGGGGTCGAAATTCGCCGTCGTTGTGGTCTC 218
|||| | ||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 172 GATTTCTCCGGAGCTCAAACGCGCCATCGAGGAGTCGAAATTCGCCGTCGTTGTGGTCTC 231
Query 219 TGTGAATTACGCTGCGTCTCGTTGGTGTCTCGAGGAGCTCGTGAAGATCATGGATTTCGA 278
|||||| ||||||||||||| |||||||||||| ||||| |||||||| |||||||||||
Sbjct 232 TGTGAACTACGCTGCGTCTCCTTGGTGTCTCGATGAGCTTGTGAAGATTATGGATTTCGA 291
Query 279 AAACAAGGGATCGC-TCAAGGTGATGCCTATCTTCTACGGCGTAGATCCGTGTCATGTGA 337
||||||||| || | ||| ||||||||||||||||||||||| ||||| |||||| |||
Sbjct 292 AAACAAGGGTTC-CATCACCGTGATGCCTATCTTCTACGGCGTGGATCCTTGTCATTTGA 350
Query 338 GGAGGCAGACCGGAGTA-GTCGCTGAACAGTTTAAGAAGCATGAGGCTAGAGAAGGAGAT 396
||||||||| ||||| | ||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 351 GGAGGCAGATCGGAG-ATGTCGCTGAACAGTTTAAGAAGCACGAGGCTAGAGAAGAAGAT 409
Query 397 CACGAGAAAGT-GCTTTCATGGAGGCAAGCATTGACCAATTTGGCGAGTATCTCCGGCGA 455
|| |||||||| || ||| ||||| | ||||||||||| ||| |||||||||||||||||
Sbjct 410 CATGAGAAAGTAGC-TTCGTGGAGACGAGCATTGACCAGTTTAGCGAGTATCTCCGGCGA 468
Query 456 TTGTTCATGGAAGTGGGAAGATGACTCGAAGATGGTCGACGAAATTACTGACAGGATATC 515
||||||| ||| ||||||||||| |||| |||| ||||||||| |||||| ||||||
Sbjct 469 ATGTTCATTGAAATGGGAAGATGAAGCGAATCTGGTGGACGAAATTGCTGACAAGATATC 528
Query 516 AAAAGAGCTGATGATTGATACAACAAGACGCAATGGGAGTGATCTTGAGGGGATTGCTGC 575
|||| | ||||||| || |||||||| | |||||||||| || || | ||||||| | |
Sbjct 529 AAAAAATCTGATGACTGTTACAACAATAAGCAATGGGAGGGACCTAGTTGGGATTGATAC 588
Query 576 ACACATGAAAGCTCTTCACCGATTACTGAATTTGAATTCTAAGAAGAGTGTGAGAGTGAT 635
||||||||| |||||| || | | || |||||||||| || || ||| |||||||| |
Sbjct 589 ACACATGAAGGCTCTTAACAAAAAATTGGATTTGAATTCCAACAAAAGTTTGAGAGTGGT 648
Query 636 TGGGATTTGGGCAAGAGGATACAATGGTAGATCGGCTCTAGCTAAATTTGTTTATCA-GA 694
||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||
Sbjct 649 TGGGATTTGGGCAAGAGGATACAATGGTAGATCAGCTTTAGCTAAATATGTTTATCAAGA 708
Query 695 ACATCTGTCA 704
|||||||||
Sbjct 709 -CATCTGTCA 717
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 55019797320
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5