BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg909676 Length=1365 Score E Sequences producing significant alignments: (Bits) Value AT1G80380.2 | Symbols: | P-loop containing nucleoside triphosp... 2056 0.0 > AT1G80380.2 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:30217219-30220004 FORWARD LENGTH=1704 Length=1704 Score = 2056 bits (1113), Expect = 0.0 Identities = 1287/1372 (94%), Gaps = 8/1372 (1%) Strand=Plus/Plus Query 1 ATGGCGGTCGCAATGTCTTGGAGTAGTTTGATATCACCGGCTCTTCAGGATTATAATAAT 60 |||||||||||||| ||| |||||||||||||||| || |||||||| ||||||||||| Sbjct 114 ATGGCGGTCGCAATATCTGGGAGTAGTTTGATATCGTCGACTCTTCAGCATTATAATAAT 173 Query 61 CGGATTAATCTCAGAGATTATCCGATTCCGTGTCACTCTTCTAATCCTATTTGCAATTCT 120 |||||| || || |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 174 CGGATTTATATCCGAGATTATCCGATTCCGTGTCACTCTTCTAATCCAATTTGCAATTCT 233 Query 121 TTTAATTTCAAAAGACGTCCTTTTTCTTCTCCTTCCTCCAAATATAACGACCATGTCGTT 180 |||||||||||||||||| | || ||| || ||||| |||||| |||||||||||||||| Sbjct 234 TTTAATTTCAAAAGACGTTCGTTCTCTCCTTCTTCCCCCAAATTTAACGACCATGTCGTT 293 Query 181 AACCCTTCTTCTTC-T-TCT-TCCTCCAAGCTTTCTCCTATTCGAACCCATTTCTCTTTC 237 |||||||| ||||| | | | ||||||||||||||||| ||||||||||||| ||||||| Sbjct 294 AACCCTTCCTCTTCTTATTTATCCTCCAAGCTTTCTCCAATTCGAACCCATTCCTCTTTC 353 Query 238 GCTGGGTGTGGCTGCTCCTGGATTCAGGACAATTCAATGGTTCATGATTATGCT---ACA 294 |||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct 354 GCTGCGTGTGGCTGCTCCTGGATTCAAGACAATTCAATGGTTCATGATTATGCTACAACA 413 Query 295 ACTAATGGGACGTCCAAGCGATGCTCGGCGTTACCAACAACAAAAACAGTGGATGTCTCT 354 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 414 ACTAATGGGACGTCCAAGCGTTGCTCGGCGTTACCAACAACAAACACAGTGGATGTCTCT 473 Query 355 TCAGTGTCAGATCTTTTTGAATTCATTTGCTCGGGTCCTCTCGTAGACAAGATTGGTATC 414 || ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct 474 TCGGTGTCAGATCTTTTTGAATTCATATGCTCGGGTCCTCTCGTAAACAAGATTGGTATC 533 Query 415 ACTCCTCAAAGAGTTGGCCAGTCTATTGACAAATGGTTACTATACGGCTCACAACTCTGC 474 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 534 ACTCCTCAAAGAGTTGGCCAGTCTATTGACAAATGGTTACTCTACGGCTCACAACTTTGT 593 Query 475 AGACTATTTCAGCTTAATGAGCTTAAGCTCACAATTCCTCAGAAAACTAGGCTATACCAC 534 ||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct 594 AGACTGTTTCAGCTTAATGAGCTTAAGCTTACAATTCCTCAGAAAGCTAGGCTATACCAC 653 Query 535 TACTATATACCCGTATTTATTTGGTGCGAAGATCAGATTGCTTTGCATAAGTCCAAGTTT 594 ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 654 TACTACATACCCGTTTTTATTTGGTGCGAAGATCAGATTGCTTTGCATAATTCCAAGTTT 713 Query 595 AAAGATGGAGATGATGTACCTCCGTTAGTGATTGGATTTAGCGCTCCTCAAGGATGTGGC 654 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 714 AAAGATGGAGATGATGTACCTCCTTTAGTGATTGGATTTAGCGCTCCTCAAGGATGTGGC 773 Query 655 AAGACTACACTTGTGTTTGCACTTGACTATCTTTTCAAAACAACAAAAAAGAAGTCGGTG 714 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| | | Sbjct 774 AAGACTACACTTGTGTTTGCACTTGATTATCTTTTCAAGACAACAAAAAAGAAGTCAGCG 833 Query 715 ACGATATCAATAGACGATTTTTACTTGACTGCACAAGGTCAGGCTGAATTGAGGGGAAAG 774 |||||||| ||||||||||||||||||||||| |||| |||||||||||||| |||| Sbjct 834 ACGATATCCGTAGACGATTTTTACTTGACTGCAGAAGGCCAGGCTGAATTGAGAAAAAAG 893 Query 775 AATCCAGGAAATGCACTTTTAGAGTATCGTGGTAATTCAGGAAGCCATGATCTGCAACTC 834 |||||||||||||||||| ||||||||||||| ||| ||||||| ||||||||| |||| Sbjct 894 AATCCAGGAAATGCACTTCTAGAGTATCGTGGAAATGCAGGAAGTCATGATCTGAAACTT 953 Query 835 TCTGTTGAGACACTAGAAGCCCTGACTAAACTGACCAAAGAAGG-TATAAAGATGAAGGT 893 |||||||| ||||||||||||||| | ||||||||||||||||| | ||||||||||||| Sbjct 954 TCTGTTGAAACACTAGAAGCCCTGTCGAAACTGACCAAAGAAGGCT-TAAAGATGAAGGT 1012 Query 894 ACCTAGGTACGACAAGTCTGCCTATAGTGGGAGAGGTGACAGAGCCGATTCATCAACATG 953 |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1013 ACCTAGGTACAATAAGTCTGCCTATAGTGGGAGAGGTGACAGAGCCGATTCATCAACATG 1072 Query 954 GCCTGAAGTTGAAGGACCTCTAACGGTTATTCTCTTTGAGGGATGGATGCTTGGTTTTAA 1013 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1073 GCCTGAAGTTGAAGGACCTCTATCGGTTATTCTCTTTGAGGGATGGATGCTTGGTTTTAA 1132 Query 1014 GCCTCTTCCAACTGACGTTGTTAAAGCAGTTGATCCGCAGCTGGAGATTGTGAATAAGAA 1073 |||||||||| |||||||||||||||||||||| || ||||||||| ||||||||||||| Sbjct 1133 GCCTCTTCCAGCTGACGTTGTTAAAGCAGTTGACCCACAGCTGGAGGTTGTGAATAAGAA 1192 Query 1074 CCTTGAAGCCTATTATGACGCATGGGACAAGTACATTGATGCTTGGGTTGTCATCAAAAT 1133 ||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 1193 CCTTGAAGCGTATTACGACGCATGGGACAAGTACATCGATGCTTGGGTCGTCATCAAAAT 1252 Query 1134 CCAGGACCCAAGTTATGTATACCGGTGGCGTCTTCAGGCGGAAATCGCCATGAGGCAGGC 1193 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1253 CCAGGACCCAAGTTATGTATACCGGTGGCGTCTTCAGGCGGAAATCGCCATGAGGCAGGA 1312 Query 1194 TGGTAAAGCTGGGATGTCGGATGAGGAGGTGAATGACTTTGTGTCGCGGTATTTGCCGGC 1253 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1313 TGGCCAAGCTGGGATGTCGGATGAGGAGGTGAATGACTTTGTGTCGCGGTATTTGCCGGC 1372 Query 1254 CTATAAGGCCTATCTTCCAACTCTTTATGCGGAAGGACCAAGCGGCTCGGACCCAGACCG 1313 |||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct 1373 GTATAAGGCCTATCTTCCAACTCTTTACGCGGAAGGGCCAAGCGGCTCAGACCCAGACCG 1432 Query 1314 TGTCCTTGTGATAGATATCGATGAAGAAAGGAACCCGATACTCGCAAACTAA 1365 |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1433 TGTCCTTGCGATAGATATCGATGAAGAAAGGAACCCGATACTCGCAAACTAA 1484 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 67218529755 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5