BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg910333 Length=855 Score E Sequences producing significant alignments: (Bits) Value AT1G06460.1 | Symbols: ACD32.1, ACD31.2 | alpha-crystallin doma... 1393 0.0 > AT1G06460.1 | Symbols: ACD32.1, ACD31.2 | alpha-crystallin domain 32.1 | chr1:1967087-1969561 REVERSE LENGTH=1226 Length=1226 Score = 1393 bits (754), Expect = 0.0 Identities = 826/860 (96%), Gaps = 7/860 (1%) Strand=Plus/Plus Query 1 ATGGAGCATGAATCTATCACCGCTCGACGCAGGCTCGCTGCCGTCGCCGCTCACTTCCCG 60 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 148 ATGGAGCATGAATCTATCACCGCTCGACGCAGGCTCGCTGCCTTCGCCGCTCACTTCCCG 207 Query 61 CCAACCAGTTACGATCCCGCCTCCACCGCATCTCTCGTCCCCTTGAACTGTAGCAGCAGT 120 |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 208 GCAACCAGTTACGATTCCGCCTCCACCGCATCTCTCGTCCCCTTGAACTGCAGCAGCAGT 267 Query 121 TTGAACTCTGTCATCCTAAGGTGTGACAACAAAATCTCTTTCGCCCGCCAAGCATCATCT 180 |||||| ||||||||| |||||||||||||||||||||||| ||||| |||||||||||| Sbjct 268 TTGAACACTGTCATCCAAAGGTGTGACAACAAAATCTCTTTTGCCCGGCAAGCATCATCT 327 Query 181 GAACAGGG-TTTCTTTATGAGGCAAGCTTCACCCGATGATGTCCTTGAGAACTTAGGCAT 239 |||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| || Sbjct 328 GAACAGGGCTTT-TTTATGAGGCCAGCTTCACCCGATGATGTCCTTGAGAACTTAGGTAT 386 Query 240 GAATTTGAAGAACTCTGTCATTAGAAGGGGTGACAACAGGCTGTATTTTGCTCGGCAAGC 299 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 387 GAATTTGAAGAACACTGTCGTTAGAAGGGGTGACAACAGGCTGTATTTTGCTCGGCAAGC 446 Query 300 ATCTTCTGCACAGGGtttttttATGAGACAGGCTTCTACTAATGAGAGGACCATACCACA 359 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 447 ATCTTCTGCACAAGGTTTTTTTATGAGACAGGCTTCGACTAATGAGAGGACCATACCACA 506 Query 360 -G--GATGCTGCATCTACCAAGTATTCTGCTACCAAAACAACTGGCTTCGATTCTTCTTC 416 | | ||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 507 TGATGCTGCTGCATCTACCAAGTTTTCTGCTACCAAAACAACTGGCTTCGATTCTTCTTC 566 Query 417 ACCTGCGTACGCTGCACCACACTTTTCTAAGCCTGCAAAAGAGGATTTCGTTTTTCCTTC 476 ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct 567 ACCTGCGTACGCTGCACCACACTTTTCTAAGCCTGCAAAAGAGGACATCTTTTTTCCTTC 626 Query 477 TGTATCACCAAATCTGCGAAAGGAAAGGCCTAAGCTTGATCTTCCTAAGTTAGCCAATTT 536 | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 627 TTTATCACCAAATCTGCAAAAGGAAAGGCCTAAGCTTGATCTTCCTAAGTTAGCCAATTT 686 Query 537 AGGTACTGTTTGGTCTCCGAGATCGAATGTTGCTGAATCCGA-ACACAGCTATGTTGTGG 595 |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||| Sbjct 687 AGGTACTGTTTGGTCTCCCAGATCGAATGTTGCTGAAT-CGACACACAGCTATGTTGTGG 745 Query 596 CAATAGAGCTACCAGGGGCCAGTATCAATGATATAAGAGTGGAGGTCGACAACATAAACT 655 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct 746 CAATAGAGCTACCAGGAGCCAGTATCAATGATATAAGAGTGGAGGTTGACAACACAAACT 805 Query 656 TGACTGTGACAGGTAGACGCACATCTATCTGTCAAAAAGTTGATGCAGGCACCAAAGCTT 715 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 806 TGACTGTGACAGGTAGACGCACATCTATCTGTCAAAAAGTTGATGCAGGCACCAAAGCTT 865 Query 716 CAATCCTTGGATATCATAAGCAAGAAATACTACAAGGACCATTCAAAGTTTCCTGGCCAC 775 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 866 CGATCCTTGGATATCATAAGCAAGAAATACTACAAGGACCATTCAAAGTTTCCTGGCCAC 925 Query 776 TCCCCAGCAATGTGAACAAGGATAATGTTTCCGCTGAATTTATGGATGGGATTCTGAGAA 835 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 926 TCCCCAGCAATGTGAACAAGGATAATGTTTCCGCTGAATTTATGGATGGGATTCTGAGAA 985 Query 836 TAGTTATTCCAAAGCTTTGA 855 |||| ||||||||||||||| Sbjct 986 TAGTAATTCCAAAGCTTTGA 1005 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41694342010 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5