BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg910871 Length=933 Score E Sequences producing significant alignments: (Bits) Value AT1G11210.1 | Symbols: | Protein of unknown function (DUF761) ... 1386 0.0 > AT1G11210.1 | Symbols: | Protein of unknown function (DUF761) | chr1:3755677-3756998 REVERSE LENGTH=1213 Length=1213 Score = 1386 bits (750), Expect = 0.0 Identities = 876/936 (94%), Gaps = 12/936 (1%) Strand=Plus/Plus Query 1 ATGGCGTCATGGATGAAGGCGGTGCTAATCTCTACTGGTTTCGTAGCCACGGCTATGCAT 60 |||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 88 ATGGCGTCGTGGATGAAAGCGGTGCTAATCTCTACTGGCGTCGTAGCCACGGCTATGCAT 147 Query 61 CTAAAGGTTATTGTTCCTGTGGCTTTAGATTTCTCACTCGATCCGATTATTTTGAGCTCT 120 |||||||||||||||||||||||| | |||||||||| |||||||||||||||||||| Sbjct 148 CTAAAGGTTATTGTTCCTGTGGCTATGGATTTCTCACAAAATCCGATTATTTTGAGCTCT 207 Query 121 TTCCTCACGTGGCTGAAACCGCCGTATCTTTACGTCATCACCAACGTCATCATCATCGTT 180 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 208 TTCCTCACGTGGCTGAAACCGCCGTATCTTTACGTCATCACTAACGTCATCATCATCGTT 267 Query 181 ATCGGAGTTTCTTACCGGATTACTACTGTCTCCAGCCACGTCGACGGCAAAGACTACGAG 240 |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 268 GTCGGAGTTTCCTACCGGATTACTACTGTCTCCAGCCACGTCGACGGCAAAGACTATGAG 327 Query 241 GCTTCTTACAGTGGCGACAATAAGTTTCAGACTGATCATCAGCAGATCGTCGAACG-ACC 299 ||||||||||||||||||||||||||||||||||||||||||||||||||| || | | | Sbjct 328 GCTTCTTACAGTGGCGACAATAAGTTTCAGACTGATCATCAGCAGATCGTCCAA-GAAGC 386 Query 300 TACTCTCCGACAG-CGGACGGAGACGAAAGATGCGGATTTTGGTTTCATCGGCAAAGTTT 358 | |||| | | | || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 387 TCCTCTAAGGC-GACGAACGGAGACGAAAGATGCGGATTTTGGTTTCATCGGCAAAGTTT 445 Query 359 TGCAGATCGTTAAGGAGCCGGAGGTTGTGTATGAAGAGAAGGAGAGGCCGGCGACGGTAG 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 446 TGCAGATCGTTAAGGAGCCGGAGGTTGTGTATGAAGAGAAGGAGAGGCCGGCGACGGTAG 505 Query 419 AGGGGGAGGTGGAGAAGAAGTGTTTAGTGGTGGTGAGCAAATCGGAAAATCAACCTCCGG 478 ||| ||||| ||||||||||| || | ||||||||||||||||||||||||||||||| Sbjct 506 AGGAGGAGG---AGAAGAAGTGTATAATTGTGGTGAGCAAATCGGAAAATCAACCTCCGG 562 Query 479 TGGAGAAGCCTCTAGTTACGGCTAGAATCGGCCAAAAGAAACCGGTGGTTAAGACTACTC 538 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 563 TGGAGAAGCCTCTTGTTACGGCTAGGATCGGCCAAAAGAAACCGGTGGTTAAGACTACAC 622 Query 539 CAGCAGAAAGGAATTCCATGAGAGCGTTAAGAGTGGCGAAGCCGAAGCGGAACGAGACAT 598 |||||||||||||||| ||||||||||| ||||| ||||| ||||| || |||||||| | Sbjct 623 CAGCAGAAAGGAATTCTATGAGAGCGTTGAGAGTTGCGAAACCGAAACGTAACGAGACGT 682 Query 599 TAGAGAATACGTGGAAGATGATTATGGAAGGCAACAAGTCAACGCTTCCGTTGACCAGTT 658 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 683 TAGAGAATACGTGGAAGATGATTATGGAAGGCAACAAGTCAACGCTTCCGTTGACCAGTT 742 Query 659 ATTACAAGAGACCTGACACGTTCGGACTTGGTGGCGAAGAGACAAAACTATCTGGTGGTT 718 ||||||||||||| ||||||||||||||||| |||||||||||||| ||| |||| || Sbjct 743 ATTACAAGAGACCCGACACGTTCGGACTTGG---CGAAGAGACAAAACAATCAGGTGTTT 799 Query 719 TGAAGAAATCGGAGTCGTTTAGTGACAGAACTAA-TAGTGACCAGTCTCTGCCGTCGCCA 777 |||||||||||||| ||||||||||||||||||| | || |||||||||||||| ||||| Sbjct 800 TGAAGAAATCGGAGACGTTTAGTGACAGAACTAACT-GTTACCAGTCTCTGCCGCCGCCA 858 Query 778 CCGCCGCCGCTAGTGAAGGTGAAGAAGGTGAAAGTGACTCGGAGTAGGGATGAGCTTAAC 837 || ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 859 CCTCCGCCGCTAGTGAAGGTGAAGAAGGTGAAAGTGTCACGGAGTAGGGATGAGCTTAAC 918 Query 838 CGGAGAGTAGAAGCGTTTATaaaaaaaTGCAACGACGAGAGGTTCGCGTCTATGAGACTG 897 |||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct 919 CGGAAAGTAGAAGCGTTTATAAAAAAATGCAACGACGAGAGGTTCGCGTCGATGAAACTG 978 Query 898 GACAACGAAGTGGCTCGTCATGGTCTTTCGTATTAA 933 ||||||||||||||||||||||||||||| |||||| Sbjct 979 GACAACGAAGTGGCTCGTCATGGTCTTTCTTATTAA 1014 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45612605476 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5