BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg912370 Length=2931 Score E Sequences producing significant alignments: (Bits) Value AT1G26760.1 | Symbols: ATXR1, SDG35 | SET domain protein 35 | c... 2460 0.0 AT1G26761.1 | Symbols: | Arabinanase/levansucrase/invertase | ... 1869 0.0 > AT1G26760.1 | Symbols: ATXR1, SDG35 | SET domain protein 35 | chr1:9248152-9249943 REVERSE LENGTH=1792 Length=1792 Score = 2460 bits (1332), Expect = 0.0 Identities = 1540/1642 (94%), Gaps = 8/1642 (0%) Strand=Plus/Plus Query 1292 CAATGGGAGGAGAGCAATTCGAGCTAGAGGAAGATCGAGACGGACCATTGGAGCTGTTGC 1351 ||||| ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| Sbjct 1 CAATGAGAGGAGAGCAATTCGAGCTAGAGGAAGATAGAGACGGGCCACTGGAGCTGTTGC 60 Query 1352 AGAGCTTGAGATCCAAAGCGACGGAGCTTCTTCTTCGGGAAGAATGGGAAGAATCTATAA 1411 ||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 61 AGAGCTTGAGATCTAAAGCAACGGAGCTTCTTCTTCGAGAAGAATGGGAAGAATCTATAA 120 Query 1412 AAGTTTACACGGAGTTCATCGATCTCTCTCGGAGGCAAGTCTCAAGAAATGGTGGATCCG 1471 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 121 AAGTTTACACGGAGTTCATCGATCTCTCTCGGAGGCAAGTCTCAAGTACTGGTGGATCCG 180 Query 1472 ACCCGGATCCGGATTCGATTGCTAAGCTCCGGAGATCTCTCTGCTTGGCTCTATGTAATC 1531 ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| Sbjct 181 ACCCGGATCCGGATTCGATTGCTAAGCTCCGGAAATCTCTCTGTTTGGCTCTATGTAATC 240 Query 1532 GAGCTGAGGCGCGAGCCAGGCTACGAGATTTCTTGGAAGCAATGAGGGATTGTGATCAAG 1591 |||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct 241 GAGCTGAGGCAAGAGCTAGGCTACGAGATTTTTTGGAAGCAATGAGGGATTGTGATCAAG 300 Query 1592 CACTTGAAGTCGAGAAGACCCATTTCAAGACTCTTCTTTGTAAAGGTAAAGTTTTGCTTG 1651 |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 301 CACTTGAAATCGAGAAGACTCATTTCAAGACTCTTCTTTGTAAAGGTAAAGTTTTGCTTG 360 Query 1652 GATTGAGCAAATACTCATTGGCTTTGGAATGCTTTAAAACGGCTCTGCTCGATCCTCAAG 1711 |||||||||||||||| |||||||||||||| |||||||||||| |||||||||| |||| Sbjct 361 GATTGAGCAAATACTCTTTGGCTTTGGAATGTTTTAAAACGGCTTTGCTCGATCCACAAG 420 Query 1712 CGAGTGATAACTTCGAGACTGTTACTGGGTACATGGAGAAATGTAAGAAGCTTGAGTTTC 1771 ||||||||||||| ||||||||||||| ||| || ||||||||||||||||||||||||| Sbjct 421 CGAGTGATAACTTGGAGACTGTTACTGTGTATATAGAGAAATGTAAGAAGCTTGAGTTTC 480 Query 1772 AGGCAAAGACTGGAGCTTTTGATTTGTCTGATTGGATCTTAAGTGGGTTTCGTGGGAGAT 1831 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 481 AGGCAAAGACTGGAGCTTTTGATTTGTCTGATTGGATCTTAAGTGAGTTTCGTGGGAAAT 540 Query 1832 GTCCCGAGCTTGCTGAGTTTATTGGGTCGATTGAGATTAAGAAATCTGAGTTTAGTGGGC 1891 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 541 GTCCTGAGCTTGCTGAGTTTATTGGGTCGATTGAGATTAAGAAATCTGAGCTTAGTGGGC 600 Query 1892 GTGGATTGTTTGCTACGAAGAATATTGTTGGCGGG-ACTTCGATTTTAGTTACAAAGGCG 1950 |||||||||||||||||||||| ||||||| | || |||| | ||||||||||||||||| Sbjct 601 GTGGATTGTTTGCTACGAAGAACATTGTTG-CTGGTACTTTGGTTTTAGTTACAAAGGCG 659 Query 1951 GTTGCGATTGAGAGAGGGATCTTAGGTAATGGAGAGTCTGGCGAGAAAGCGCAGTTGATA 2010 |||||||||||||||||||||||||| |||||||||| ||| || |||||||||||||| Sbjct 660 GTTGCGATTGAGAGAGGGATCTTAGGAAATGGAGAGTGTGGGGAAAAAGCGCAGTTGATC 719 Query 2011 ATGTGGAAGAATTTCGTTGAAGAGGTTACTGAATCCGTGAGGAAATGCGGTAGGACACGT 2070 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 720 ATGTGGAAGAACTTCGTTGAAGAGGTTACTGAATCCGTGAGAAAATGCGGTAGGACTCGT 779 Query 2071 CGAGTTGTCTCCGCTTTGTCCACTGGACAAGACGAAGACAATCTGGAGATTCCAGATATA 2130 ||||||||||||||||||||||||||||||| ||||| | |||||||||||| || ||| Sbjct 780 CGAGTTGTCTCCGCTTTGTCCACTGGACAAGGTGAAGATAGTCTGGAGATTCCTGAGATA 839 Query 2131 GCTCTCTTTAGGCCTGATGAAGCATTTGAAACTTATGATGACTCGAAACAGAGTTTGGAT 2190 ||||| ||||| |||||||||||||||||||||| || ||||| |||||||||||||||| Sbjct 840 GCTCTGTTTAGACCTGATGAAGCATTTGAAACTTGTGGTGACTGGAAACAGAGTTTGGAT 899 Query 2191 ACGGAGAAGTTATTGAGTATCTTGGATGTGAATTCTCTGGTGGAAGATGCTGTTTCAGCT 2250 || |||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 900 ACAGAGAAGTTGTTGAGTATCTTGGATGTGAATTCTCTGGTGGAAGATGCGGTTTCAGGT 959 Query 2251 AAAGTTATGGGGAAGAACAAAGAGTATTACGGTGTAGGGCTATGGACTCTAGCTTCATTC 2310 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 960 AAAGTTATGGGGAAGAACAAAGAGTATTACGGTGTAGGGCTATGGACTTTAGCTTCATTC 1019 Query 2311 ATTAACCATTCGTGTATCCCAAACGCAAGACGTCTCCATGTTGGAGACTACGTGATTGTT 2370 || ||||| ||||||||||| |||||||||||||| || ||||||||||||||||||||| Sbjct 1020 ATCAACCACTCGTGTATCCCTAACGCAAGACGTCTTCACGTTGGAGACTACGTGATTGTT 1079 Query 2371 CATGCCTCCAGAGACATCAAAGCCGGGGAGGAGATCA-CTTTTGCTTACTTCGACGTGCT 2429 |||||||| ||||| |||||| | ||||| ||||| | |||| |||||||| || ||||| Sbjct 1080 CATGCCTCGAGAGATATCAAAACAGGGGAAGAGATTAGCTTT-GCTTACTTTGATGTGCT 1138 Query 2430 TTCTCCATTGGAAAAGCGGAAAGAGATGGCTGAGTCATGGGGATTTCGTTGCGGATGCAG 2489 ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 1139 TTCTCCATTGGAAAAACGGAAAGAGATGGCTGAGTCATGGGGGTTTTGTTGCGGATGCAG 1198 Query 2490 TAGATGCAAGTTTGAGAGTCTCTTGTGTGTTACCAACCAAGAGATAAGAGAGCTTGAAAT 2549 ||||||||||||||||||| |||||| || ||||||||| ||| | |||||| ||||||| Sbjct 1199 TAGATGCAAGTTTGAGAGTGTCTTGTATGCTACCAACCAGGAGGTTAGAGAGTTTGAAAT 1258 Query 2550 GGGTTTAGAGAGAGGCGTAGATGC-GGGAAACGCGGTTTATATGGTGGAGGAAGGGATGA 2608 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 1259 GGGTTTAGAGAGAGGCGTAGATGCAGGGAA-CGCGGTTTATATGGTGGAGGAAGGGATGA 1317 Query 2609 AGAGATGGAAGGTAAAAGGGAAGGATAAAGGGTTATTGAGAGCATCTTATTGGGGAATTT 2668 |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| Sbjct 1318 AGAGATGGAAGGTAAAAGGGAAAGATAAAGGGTTGCTGAGAGCATCTTATTGGGGAGTTT 1377 Query 2669 ATGATGAGATTTATAACTCGGAGAGATTTATGAAGAGGTGGGGAAGGAAGATACCAACAA 2728 ||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||| Sbjct 1378 ATGATGAGATTTATAACTCAGAGAGACTTATGAAAAGGTGGGGAAGGAAGATACCAACAA 1437 Query 2729 TGGAAGTTGTGGTGGATAGTGTGTCTGATGTTGTTGGAAGTGATGAGAGATTGATGAAGA 2788 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1438 TGGAAGTTGTGGTGGATAGTGTCTCTGATGTTGTTGGAAGTGATGAGAGATTGATGAAGA 1497 Query 2789 TGCCTGTGGAAGGGATGATGAAGAAGAATGGAGGTTGCAGTAACATTGTGGAGATGGATA 2848 || ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| | Sbjct 1498 TGGCTGTGGAAGGGATGATGAAGAAGCATGGAGGTTTCAGTAACATTGTGGAGATGGAGA 1557 Query 2849 AAAT-ATTGAAGCTAGGGAAGGGTGTTTATGGCAAAGTGGTATCGAAAAAGAAGGCAATG 2907 |||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1558 AAATCAT-GAAGCTAGGGAAGGGGGTTTATGGCAAAGTGGTATCGAAAAAGAAGGCAATG 1616 Query 2908 AAGACTCTTCTTGGCCTAGAGT 2929 ||||||||||||||| |||||| Sbjct 1617 AAGACTCTTCTTGGCATAGAGT 1638 > AT1G26761.1 | Symbols: | Arabinanase/levansucrase/invertase | chr1:9250224-9251644 REVERSE LENGTH=1421 Length=1421 Score = 1869 bits (1012), Expect = 0.0 Identities = 1203/1293 (93%), Gaps = 22/1293 (2%) Strand=Plus/Plus Query 1 ATGGAAGCTACTTG-TGCAAATCCCTCCATTGTCACCGCCTCGAGAACAATTCAACCTTA 59 ||||||||||| || || |||||||||||||||||| |||||||||||| |||||||||| Sbjct 42 ATGGAAGCTAC-TGCTGTAAATCCCTCCATTGTCACTGCCTCGAGAACAGTTCAACCTTA 100 Query 60 C---CGATCACCCGCTCTCTCACTTCGATTCCTTACTTACCGGAACAAACGtttttttCC 116 | |||| | | |||||||||||||||||| ||| ||||||||||||||| ||| ||| Sbjct 101 CAGGCGATTATCAACTCTCTCACTTCGATTCCCTACATACCGGAACAAACGTGTTTCTCC 160 Query 117 TTAT-TCGCTCACAGTCACAAGATGTTCCACCACAAAAAGCAGAGAACCGGGTCAAGATT 175 || | |||||||| ||||||||||||||||||||||||| |||||| | |||||||||| Sbjct 161 TT-TCACGCTCACAATCACAAGATGTTCCACCACAAAAAGTAGAGAAGCAGGTCAAGATT 219 Query 176 CAACCTTTGAATTATCGATCTCTTTGAAGAGAGGGCTGGTTCTTGATCTGGGCGTCTCTA 235 | |||||||||||||||||||||||| ||| ||||||| |||||||||| Sbjct 220 ----C--------ATCGATCTCTTTGAAGAGAGGGCTAGTTTTTGATCTTGGCGTCTCTA 267 Query 236 AAGATTCATGGGACAGTGAGGAGATTGGTTCTCCGGTTGTGAAGAGATTTCTAAGCGATA 295 ||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 268 AAGATTCGTGGCACAGTGAGGAGATTGGCTCTCCGGTTGTGAAGAGATTTCTAAGCGATA 327 Query 296 ACGAAGAGAGATGGTACATGTGGTACCATGGAAGCTCAAAGCAGAACCCTGTTTCTGATT 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 328 ACGAAGAGAGATGGTACATGTGGTACCATGGAAGCTCAAAGCAGAACCCTGTTTCTGATT 387 Query 356 GTATCGGATTAGCGGTTTCAAACAATGGGATTCATTGGGAAAGAGGAAAAGGGAAAGTTG 415 |||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| Sbjct 388 CTATCGGATTAGCGGTTTCCAACAATGGGATTCATTGGGAAAGAGGAAATGGTAAAGTTG 447 Query 416 AGTCAAGCGACGATGTGGGTTTGGTTATGAGCTGTGGTGAAGACTGGTGGGGATTTGATA 475 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 448 AGTCAAGCGAAGATGTGGGTTTGGTTATGAGCTGTGGTGAAGACTGGTGGGGATTTGATA 507 Query 476 CTGCAAGTGTTAGACCTGGTGAAGTTGTGATAATGTCGAGTTCTAAAGTCAGAGCTAATA 535 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 508 CTGCAAGTGTTAGACCCGGTGAGGTTGTGATAATGTCGAGTTCTAAAGTCAGAGCTAATA 567 Query 536 GTTCTGTTTACTGGATGTATTACACTGGCTACACTACTGAGACTGTTGAGTTTCAATCCC 595 | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 568 GCTCTGTTTACTGGATGTATTACACTGGCTACACTAAGGAGACTGTTGAGTTTCAATCCC 627 Query 596 AAGGTTTCACTTCCGGGCTGGGAAATCCGGAAAGGTTTCACCTTTGTGATGAGAATGTTG 655 ||| ||| || |||| | ||||||||||||||||||||||||||||||||||||||| | Sbjct 628 AAGATTTTACGTCCGTGTTGGGAAATCCGGAAAGGTTTCACCTTTGTGATGAGAATGCGG 687 Query 656 AGAAATCTAGGG--T-TTATAGGTCACTTCCCGGGTTAGCAATTAGTCAAGATGGTAGGC 712 |||||||||||| | ||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 688 AGAAATCTAGGGTTTATTATAGGTCACTTCCAGGGTTAGCTATTAGTCAAGATGGTAGGC 747 Query 713 ATTGGGCTAGAATTGAAGGTGAGCATCATAGTGGGGCATTGTTTGATGTTGGGTCTGAAA 772 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 748 ATTGGGCTAGAATTGAAGGTGAGCATCATAGTGGGGCATTGTTTGATGTTGGGTCTGAAA 807 Query 773 AAGATTGGGACTTTCACTATGTTGCATCTCCACATGTAGTTTTCCATGGAGATGGCGATT 832 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 808 AAGATTGGGACTTTCTCTATATTGCATCTCCACATGTAGTTTTCCATGGAGATGGCGATT 867 Query 833 TACGGATGTATTACCATTCGTTCGATGATAAACCCGGTGAATTCTGCATTGGGATGGCGA 892 ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 868 TACGGATGTATTACCATTCATTCGATGAGAAAACCGGTGAATTCTGCATTGGGATGGCGA 927 Query 893 GGTCTAGAGATGGGATCAAGTGGTTAAAATTGGGAAAGATATTAGGAGGAAGAATATCCG 952 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct 928 GGTCTAGAGATGGGATCAAGTGGTTAAAATTGGGAAAGATCTTAGGAGGAAGAAAATCCG 987 Query 953 AAAAGGATGGATCGGGTTTCTTTGATGAGCTTGGAGGTAGATATCCTTGTGTGACAAGGA 1012 |||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 988 AAAAGGATGGATTAGGTTTCTTCGATGAGCTTGGAGGAAGATATCCTTGTGTGACAAGGA 1047 Query 1013 ACAAGAGAGACGAGAGTTATGTGATGGCGTATGAAGGTGTAGATAGAACCGGGAAAATGA 1072 |||||||||| ||||||||||||||||| |||||||||||||||||||||||||| | || Sbjct 1048 ACAAGAGAGATGAGAGTTATGTGATGGCTTATGAAGGTGTAGATAGAACCGGGAAGACGA 1107 Query 1073 GCATTGGCTTGGCGGTTTCGAAAGACGGGATTAATGATTGGAAACGGGTGCAAGACGAGG 1132 |||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 1108 GCATAGGCTTCGCGGTTTCGAAAGACGGGATTAAAGATTGGAAACGAGTGCAAGACGAGG 1167 Query 1133 AAGCCGTGGTTGCGGTTGGTGAAGGCAGTGCGTGGGATAATGAAGGAGTTGGGTGTCCAT 1192 |||| ||| | ||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 1168 AAGCGGTGATCGCGGTTGGTGAAGGCGGTGCGTGGGATAACGAAGGAGTTGGGTGTCCAT 1227 Query 1193 ATTTGATTGAGATGGATGGAGACTCTGATCATCAATGGAGATTGTATTATAGAGGTGTTG 1252 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1228 ATTTGATTGAGATGGATGGAGATTCTGATCATCAATGGAGATTGTATTATAGAGGTGTTG 1287 Query 1253 GTAATGGTGGAAGAACAGGAATAGGCTTAGCTG 1285 ||||||||||||||||||| |||||||| |||| Sbjct 1288 GTAATGGTGGAAGAACAGGTATAGGCTTGGCTG 1320 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 145684802472 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5