BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg913131
Length=1485
Score E
Sequences producing significant alignments: (Bits) Value
AT1G33090.1 | Symbols: | MATE efflux family protein | chr1:119... 2322 0.0
AT1G33100.1 | Symbols: | MATE efflux family protein | chr1:119... 2097 0.0
AT1G33110.1 | Symbols: | MATE efflux family protein | chr1:120... 1962 0.0
> AT1G33090.1 | Symbols: | MATE efflux family protein | chr1:11993298-11996712
FORWARD LENGTH=1815
Length=1815
Score = 2322 bits (1257), Expect = 0.0
Identities = 1414/1490 (95%), Gaps = 10/1490 (1%)
Strand=Plus/Plus
Query 1 ATGGCCGGAGGAGGAGGAGAGCTCACGGCGGCTTTGCTGAATAAGACGTTTGAGAACGGC 60
|||||||||| ||||||||||||||||||||||||| |||| |||||| |||||||||
Sbjct 161 ATGGCCGGAGAAGGAGGAGAGCTCACGGCGGCTTTGTTGAAAAAGACGACTGAGAACGGA 220
Query 61 GGAGAAGAAAAGGATGAGTTAGGGTTGAAGGAAAAGGTTTGGATAGAATCAAAGAAGCTA 120
||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 221 GGAGAAGAAAATGATGAGTTAGGGTTGAAGGAAAAAGTTTGGATTGAATCAAAGAAGCTA 280
Query 121 TGGGTTGTGGCGGCCCCATCGATCTTCACAAAATTCTCTACGTACGGAGTCTCATTGGTA 180
|||||||||||||| |||||||||||||| || ||||||||||||||||| |||||||||
Sbjct 281 TGGGTTGTGGCGGCGCCATCGATCTTCACGAAGTTCTCTACGTACGGAGTTTCATTGGTA 340
Query 181 ACTCAAGG-TTTCGTTGGCCATCTTGGCCCAACCGAGTTGGCCGCTTACTCTATCACCTT 239
|||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 341 ACTCAAGGCTTT-GTTGGCCATATTGGCCCAACCGAGTTGGCCGCTTACTCTATCACCTT 399
Query 240 CACCGTTCTCCTCCGTTTCAGTAATGGTATCTTGTTAGGTATGGCCAGTGCACTAGGAAC 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 400 CACCGTTCTCCTCCGTTTCAGTAATGGTATCTTGTTAGGTATGGCCAGTGCACTAGGAAC 459
Query 300 ATTATGTGGTCAAGCCTACGGAGCCAAACAATACCATATGCTCGGGAT-CTACCTCCAAA 358
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 460 ATTATGTGGTCAAGCCTACGGAGCCAAACAATACCATATGCTCGGGATTC-ACCTCCAAA 518
Query 359 GGTCATGGATCGTCCTCACAGGTTGTACCATTTGCATCATGCCCGTCTTCATCTTCTCAG 418
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 519 GGTCATGGATCGTCCTTACAGGTTGTACCATTTGCATCATGCCCATCTTCATCTTTTCAG 578
Query 419 GCCCTATCCTCTTAGTCTTAGGTCAAGAGGAACGCATTGTTCGTGTGGCTCGGGTCATAG 478
|||| |||||||||| ||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 579 GCCCGATCCTCTTAGCCTTAGGTCAAGAGGACCACATTGTTCGTGTGGCTCGGGTCATAG 638
Query 479 CCCTATGGCTCATAGGCATCAACTTCACCTTCGTACCCGCCTTCACTTGCCAAATATTCC 538
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 639 CCCTATGGCTCATAGCCATCAACTTCACCTTCGTACCCGCCTTCACTTGCCAAATATTCC 698
Query 539 TCCAATCTCAGAGCAAGAACAAGATCATCGCCTATGTGTCTGCTGTCACCTTAGGGCTCC 598
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 699 TCCAATCTCAGAGCAAGAACAAGATCATCGCCTACGTGTCTGCTGTAACCTTAGGGCTCC 758
Query 599 ATGTTTTCTTCTCGTGGCTCCTAGTGGTTCATTTCAATTTCGGGATCACTGGTGCTATGA 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 759 ATGTTTTCTTCTCGTGGCTCCTAGTGGTTCATTTCAATTTCGGGATCACTGGTGCAATGA 818
Query 659 CCTCTACGCTAGTTGCGTTCTGGTTGCCTAACATTGCGCAGCTCTTAT-TCGTCACGTGC 717
||||||||||||||||||||||| |||||||||||| ||||||||| | | ||||| | |
Sbjct 819 CCTCTACGCTAGTTGCGTTCTGGATGCCTAACATTGTGCAGCTCTTGTAT-GTCACATCC 877
Query 718 GGTGGGTGTAAGGACACATGGAAAGGATTCACTATGTTGGTCTTCAAAGATTTATGGCCC 777
|||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 878 GGTGGGTGTAAGGATACATGGAGAGGATTCACTATGTTGGCCTTCAAAGATTTATGGCCC 937
Query 778 GTCTTCAAACTATCTTTGTCTTCCGGTGGAATGGTTTGCTTGGAGTTATGGTACAACTCG 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 938 GTCTTCAAACTATCTTTGTCTTCCGGTGGAATGGTTTGCTTGGAGTTATGGTACAACTCG 997
Query 838 ATATTAGTATTGCTCACTGGAAATATGAAAAACGCAGAGGTGGCTCTTGATGCACTAGCA 897
|||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||
Sbjct 998 ATATTAGTATTGCTCACTGGGAATTTGAAAAACGCAGAGGTGGCGATTGATGCACTAGCA 1057
Query 898 ATCTGCATCAACGTAAATGCACTGCAGATGATGATATCACTTGGGTTTTTGGCAGCAGTA 957
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1058 ATCTGCATCAACGTAAATGCACTGCAGATGATGATAGCACTTGGGTTTTTGGCAGCAGTA 1117
Query 958 AGTGTAAGAGTGTCCAACGAGCTCGGTATGGGAAACCCCAAAGGAGCCAAATTTGCAACA 1017
|||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||
Sbjct 1118 AGTGTAAGAGTGTCCAACGAGCTCGGTAGGGGAAACCCCGAAGGCGCCAAATTTGCAACA 1177
Query 1018 TT-GATAGCGGTTTTCACGTCACTCTCTATAGGAATAGTTCTGTTCTTTGTCTTCTTGTT 1076
| | ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||
Sbjct 1178 ATCG-TAGCGGTTTTCACGTCACTCTCTATAGGATTAGTTCTATTCTTCGTCTTCTTGTT 1236
Query 1077 TCTAAGGGGAAGAATTTCCTACATTTTCACTACAAGTGAAGCCGTCGCAGCCGAAGTTGC 1136
|||||||||||||||||| ||||||||||||||||||||||| || ||||||||||| ||
Sbjct 1237 TCTAAGGGGAAGAATTTCGTACATTTTCACTACAAGTGAAGCTGTGGCAGCCGAAGTCGC 1296
Query 1137 CGATCTTTCTCCACTCTTAGCATTTTCCATCCTCCTGAATAGTATTCAACCCGTTCTCTC 1196
|||||||||||||| |||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct 1297 TGATCTTTCTCCACTTTTAGCATTTTCCATCCTCTTGAACAGTGTTCAACCCGTTCTCTC 1356
Query 1197 TGGAGTGGCAGTCGGAGCGGGATGGCAAGGATATGTGGCTTACGTTAACCTTGCTTGCTA 1256
||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1357 AGGAGTGGCAGTGGGAGCGGGATGGCAAGGATATGTGGCTTACATTAACCTTGCTTGCTA 1416
Query 1257 TTACCTTCTGGGAATTCCTGTTGGTGT-GATCCTTGGTTACGTCGTTGGTTTGCAAGTCA 1315
||||||||| ||||||||||||||| | | ||||||||||||| ||||||||||||||||
Sbjct 1417 TTACCTTCTCGGAATTCCTGTTGGTCTTG-TCCTTGGTTACGTTGTTGGTTTGCAAGTCA 1475
Query 1316 AAGGTGTATGGATTGGAATGCTCTTTGGAATATTCGTTCAGACTTGTGTGCTTAGCATCA 1375
||||||||||||| |||||||| ||||||||||| ||||||||||||||||||| |||||
Sbjct 1476 AAGGTGTATGGATAGGAATGCTTTTTGGAATATTTGTTCAGACTTGTGTGCTTACCATCA 1535
Query 1376 TGACTCTCAGAACAGATTGGGATCAACAGGTATCTACGTCGTTGAGAAATATAAACCGGT 1435
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1536 TGACTCTCAGAACAGATTGGGATCAACAGGTATCTACGTCGTTGAAAAATATAAACCGGT 1595
Query 1436 GGGTTGTACCAGAATCTAGAGATGCAAACCAAATTTCATCAGAGGAATAA 1485
|||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1596 GGGTTGTACCAGAATCTAGAGATGCAAATCAAATTTCATCAGAGGAATAA 1645
> AT1G33100.1 | Symbols: | MATE efflux family protein | chr1:11997683-12001308
FORWARD LENGTH=1476
Length=1476
Score = 2097 bits (1135), Expect = 0.0
Identities = 1374/1489 (92%), Gaps = 17/1489 (1%)
Strand=Plus/Plus
Query 1 ATGGCCGGAGGAGGAGGAGAGCTCACGGCGGCTTTGCTGAATAAGACGTTTGAGAACGGC 60
||||||||| |||||||||||||||||| |||| || || | || | ||| ||||
Sbjct 1 ATGGCCGGAAGAGGAGGAGAGCTCACGGAGGCTCTGGTG-A-AA-A------AGACCGGC 51
Query 61 GGAGAAGAAAAGGATGAGTTAGGGTTGAAGGAAAAGGTTTGGATAGAATCAAAGAAGCTA 120
|||||||| |||||||||| ||| ||||||| ||||||||||| ||||||||||| ||
Sbjct 52 AGAGAAGAAGAGGATGAGTTGGGGATGAAGGAGAAGGTTTGGATTGAATCAAAGAAACTG 111
Query 121 TGGGTTGTGGCGGCCCCATCGATCTTCACAAAATTCTCTACGTACGGAGTCTCATTGGTA 180
|||||||||||||| ||| |||||||||||| || |||||||| |||||| ||| |||||
Sbjct 112 TGGGTTGTGGCGGCGCCAGCGATCTTCACAAGATACTCTACGTTCGGAGTTTCAATGGTA 171
Query 181 ACTCAAGGTTTCGTTGGCCATCTTGGCCCAACCGAGTTGGCCGCTTACTCTATCACCTTC 240
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 172 ACTCAAGCTTTCATTGGCCATCTTGGCCCAACCGAGTTGGCCGCTTACTCTATCACCTTC 231
Query 241 ACCGTTCTCCTCCGTTTCAGTAATGGTATCTTGTTAGGTATGGCCAGTGCACTAGGAACA 300
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 232 ACCATTCTCCTCCGTTTCAGTAATGGTATCTTGTTAGGTATGGCCGGTGCACTAGGAACA 291
Query 301 TTATGTGGTCAAGCCTACGGAGCCAAACAATACCATATGCTCGGGATCTACCTCCAAAGG 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 292 TTATGTGGTCAAGCCTACGGAGCCAAACAATACCAGATGCTCGGGATCTACCTCCAAAGG 351
Query 361 TCATGGATCGTCCTCACAGGTTGTACCATTTGCATCATGCCCGTCTTCATCTTCT-CAGG 419
||||||||||||||||||||| ||||||||||| ||||||||||||||||||| | | ||
Sbjct 352 TCATGGATCGTCCTCACAGGTGGTACCATTTGCCTCATGCCCGTCTTCATCTT-TGCGGG 410
Query 420 CCCTATCCTCTTAGTC-TTAGGTCAAGAGGAACGCATTGTTCGTGTGGCTCGGGTCATAG 478
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 411 CCCTATCCTCTTAG-CTTTAGGTCAAGAGGAACGCATTGTTCGTGTGGCTCGGGTCTTAG 469
Query 479 CCCTATGGCTCATAGGCATCAACTTCACCTTCGTACCCGCCTTCACTTGCCAAATATTCC 538
|||||||| ||||||||||||||||| ||||||| ||| |||||||||||||||| || |
Sbjct 470 CCCTATGGGTCATAGGCATCAACTTCTCCTTCGTGCCCTCCTTCACTTGCCAAATGTTTC 529
Query 539 TCCAATCTCAGAGCAAGAACAAGATCATCGCCTATGTGTCTGCTGTCACCTTAGGGCTCC 598
||||| ||||||||||||||||||| || |||| ||| |||||||| ||||||||||||
Sbjct 530 TCCAAGCTCAGAGCAAGAACAAGATTATTTCCTACGTGACTGCTGTCTCCTTAGGGCTCC 589
Query 599 ATGTTTTCTTCTCGTGGCTCCTAGTGGTTCATTTCAATTTCGGGATCACTGGTGCTATGA 658
|||| |||||||||||||||||||||| |||||||||||| |||||||||||||| ||||
Sbjct 590 ATGTCTTCTTCTCGTGGCTCCTAGTGGCTCATTTCAATTTTGGGATCACTGGTGCGATGA 649
Query 659 CCTCTACGCTAGTTGCGTTCTGGTTGCCTAACATTGCGCAGCTCTTAT-TCGTCACGTGC 717
|||||| |||| |||||||||||||||||| ||||| ||||||||| | | || || ||
Sbjct 650 CCTCTATGCTAATTGCGTTCTGGTTGCCTATCATTGTGCAGCTCTTGTAT-GTAACATGT 708
Query 718 GGTGGGTGTAAGGACACATGGAAAGGATTCACTATGTTGGTCTTCAAAGATTTATGGCCC 777
||||| |||||||| ||||||| ||||||| ||||||||| |||||||||||| ||||||
Sbjct 709 GGTGGATGTAAGGATACATGGAGAGGATTCTCTATGTTGGCCTTCAAAGATTTGTGGCCC 768
Query 778 GTCTTCAAACTATCTTTGTCTTCCGGTGGAATGGTTTGCTTGGAGTTATGGTACAACTCG 837
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 769 GTCTTAAAACTATCTTTGTCTTCCGGTGGAATGCTTTGCTTGGAGTTATGGTACAACTCG 828
Query 838 ATATTAGTATTGCTCACTGGAAATATGAAAAACGCAGAGGTGGCTCTTGATGCACTAGCA 897
|||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 829 GTATTGGTATTGCTCACTGGAAATTTGAAAAACGCAGAGGTGGCTCTTGATGCACTAGCA 888
Query 898 ATCTGCATCAACGTAAATGCACTGCAGATGATGATATCACTTGGGTTTTTGGCAGCAGTA 957
|||||||||| | ||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 889 ATCTGCATCAGCATAAATGCACTGGAGATGATGATAGCACTTGGGTTTTTGGCAGCAGTA 948
Query 958 AGTGTAAGAGTGTCCAACGAGCTCGGTATG-GGAAACCCCAAAGGAGCCAAATTTGCAAC 1016
|||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||
Sbjct 949 AGTGTAAGAGTGTCCAACGAGCTCGGTA-GTGGAAACCCCAAAGGAGCCAAGTTTGCAAC 1007
Query 1017 ATTGATAGCGGTTTTCACGTCACTCTCTATAGGAATAGTTCTGTTCTTTGTCTTCTTGTT 1076
|||||||||||||||||||||||||||||||||||||||||| ||||| || || |||||
Sbjct 1008 ATTGATAGCGGTTTTCACGTCACTCTCTATAGGAATAGTTCTATTCTTCGTTTTTTTGTT 1067
Query 1077 TCTAAGGGGAAGAATTTCCTACATTTTCACTACAAGTGAAGCCGTCGCAGCCGAAGTTGC 1136
| | |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1068 TTTGAGGGGAAGAATTTCCTACATTTTCACTACAAGTGAAGCTGTCGCGGCCGAAGTTGC 1127
Query 1137 CGATCTTTCTCCACTCTTAGCATTTTCCATCCTCCTGAATAGTATTCAACCCGTTCTCTC 1196
|||||||||||||| |||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct 1128 TGATCTTTCTCCACTTTTAGCATTTTCCATCCTCTTGAACAGTGTTCAACCTGTTCTCTC 1187
Query 1197 TGGAGTGGCAGTCGGAGCGGGATGGCAAGGATATGTGGCTTACGTTAACCTTGCTTGCTA 1256
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1188 TGGAGTGGCAATCGGAGCGGGATGGCAAGGATATGTGGCTTACGTTAACCTTGCTTGCTA 1247
Query 1257 TTACCTTCTGGGAATTCCTGTTGGTGTGATCCTTGGTTACGTCGTTGGTTTGCAAGTCAA 1316
||||||| | ||||||||| ||||||| ||||||||||| || |||||||||||||| ||
Sbjct 1248 TTACCTTGTCGGAATTCCTATTGGTGTTATCCTTGGTTATGTTGTTGGTTTGCAAGTGAA 1307
Query 1317 AGGTGTATGGATTGGAATGCTCTTTGGAATATTCGTTCAGACTTGTGTGCTTAGCATCAT 1376
|||||||||||| |||||||| ||||||||||||||||||||||||||||| | | ||||
Sbjct 1308 AGGTGTATGGATAGGAATGCTTTTTGGAATATTCGTTCAGACTTGTGTGCTCACCGTCAT 1367
Query 1377 GACTCTCAGAACAGATTGGGATCAACAGGTATCTACGTCGTTGAGAAATATAAACCGGTG 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1368 GACTCTCAGAACAGATTGGGATCAACAGGTATCTACGTCGTTGAGAAATATAAACCGGTG 1427
Query 1437 GGTTGTACCAGAATCTAGAGATGCAAACCAAATTTCATCAGAGGAATAA 1485
||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1428 GGTTGTACCAGAATCTAGAGATGCAAATCAAATTTCATCAGAGGAATAA 1476
> AT1G33110.1 | Symbols: | MATE efflux family protein | chr1:12004927-12008833
FORWARD LENGTH=1857
Length=1857
Score = 1962 bits (1062), Expect = 0.0
Identities = 1349/1490 (91%), Gaps = 10/1490 (1%)
Strand=Plus/Plus
Query 1 ATGGCCGGAGGAGGAGGAGAGCTCACGGCGGCTTTGCTGAATAAGACGTTTGAGAACGGC 60
|||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||
Sbjct 158 ATGGCCGGAGGAGGAGGAGAGCTCACGGCGGCTTTGTTGAAAAAGACGGCGGAGAACGGC 217
Query 61 GGAGAAGAAAAGGATGAGTTAGGGTTGAAGGAAAAGGTTTGGATAGAATCAAAGAAGCTA 120
|||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 218 GGAGAAGAGAAGGATGAGTTAGGGTTGAAGCAAAAGGTTTGGATTGAATCAAAGAAGCTA 277
Query 121 TGGGTTGTGGCGGCCCCATCGATCTTCACAAAATTCTCTACGTACGGAGTCTCATTGGTA 180
||| |||||||||| ||| |||||||||| | |||||| |||| |||||| ||| | ||
Sbjct 278 TGGATTGTGGCGGCGCCAGCGATCTTCACGAGATTCTCAACGTTCGGAGTTTCAATAATA 337
Query 181 ACTCAAGGTTTCGTTGGCCATCTTGGCCCAACCGAGTTGGCCGCTTACTCTATCACCTTC 240
| |||| |||| | ||||||||||| || | |||||||| ||||||||||||||||||
Sbjct 338 AGTCAATCTTTCATCGGCCATCTTGGTCCTATAGAGTTGGCTGCTTACTCTATCACCTTC 397
Query 241 ACCGTTCTCCTCC-GTTTCAGTAATGGTATCTTGTTAGGTATGGCCAGTGCACTAGG-AA 298
||||||||||||| |||| ||||||||||||||||||||||||||||||||| | || ||
Sbjct 398 ACCGTTCTCCTCCGGTTT-AGTAATGGTATCTTGTTAGGTATGGCCAGTGCA-TTGGAAA 455
Query 299 CATTATGTGGTCAAGCCTACGGAGCCAAACAATACCATATGCTCGGGATCTACCTCCAAA 358
|| |||||||||||||||||||||| |||||| | |||||||||||||||||||||||||
Sbjct 456 CACTATGTGGTCAAGCCTACGGAGCTAAACAAAATCATATGCTCGGGATCTACCTCCAAA 515
Query 359 GGTCATGGATCGTCCTCACAGGTTGTACCATTTGCATCATGCCCGTCT-TCATCTTCTCA 417
|||||||||||||||| |||||||||||||||||| ||| |||||||| | ||||||||
Sbjct 516 GGTCATGGATCGTCCTTACAGGTTGTACCATTTGCCTCACGCCCGTCTAT-ATCTTCTCT 574
Query 418 GGCCCTATCCTCTTAGTCTTAGGTCAAGAGGAACGCATTGTTCGTGTGGCTCGGGTCATA 477
|||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||
Sbjct 575 GGCCCTATCCTCTTAGCCTTAGGTCAAGAGGAACGCATTGTCCGTGTGGCTCGGATCATA 634
Query 478 GCCCTATGGCTCATAGGCATCAACTTCACCTTCGTACCCGCCTTCACTTGCCAAATATTC 537
||||||||| ||||||||||||||||| | || || || |||||||||||||||| |||
Sbjct 635 GCCCTATGGGTCATAGGCATCAACTTCTCTTTTGTGCCTTCCTTCACTTGCCAAATGTTC 694
Query 538 CTCCAATCTCAGAGCAAGAACAAGATCATCGCCTATGTGTCTGCTGTCACCTTAGGGCTC 597
|||||| |||||||||||||||||||||| ||||| ||| |||||||| |||||||| ||
Sbjct 695 CTCCAAGCTCAGAGCAAGAACAAGATCATTGCCTACGTGGCTGCTGTCTCCTTAGGGGTC 754
Query 598 CATGTTTTCTTCTCGTGGCT-CCTAGTGGTTCATTTCAATTTCGGGATCACTGGTGCTAT 656
||||| ||||| |||||||| | || |||||||||||||||| |||||||||||||||||
Sbjct 755 CATGTCTTCTTGTCGTGGCTACTTA-TGGTTCATTTCAATTTTGGGATCACTGGTGCTAT 813
Query 657 GACCTCTACGCTAGTTGCGTTCTGGTTGCCTAACATTGCGCAGCTCTTATTCGTCACGTG 716
||||||||||||||||||||||||||||||||| ||||| || ||||| |||||||||||
Sbjct 814 GACCTCTACGCTAGTTGCGTTCTGGTTGCCTAATATTGCCCAACTCTTGTTCGTCACGTG 873
Query 717 CGGTGGGTGTAAGGACACATGGAAAGGATTCACTATGTTGGTCTTCAAAGATTTATGGCC 776
||||||||||||||||||||||| ||||||| ||||| ||| ||||||||||||||||||
Sbjct 874 CGGTGGGTGTAAGGACACATGGAGAGGATTCTCTATGATGGCCTTCAAAGATTTATGGCC 933
Query 777 CGTCTTCAAACTATCTTTGTCTTCCGGTGGAATGGTTTGCTTGGAGTTATGGTACAACTC 836
|||||||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||
Sbjct 934 CGTCTTCAAACTTTCTATGTCTTCCGGTGGAATGCTTTGCTTGGAACTATGGTACAACTC 993
Query 837 GATATTAGTATTGCTCACTGGAAATATGAAAAACGCAGAGGTGGCTCTTGATGCACTAGC 896
|| || ||| |||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 994 AATCTTGGTACTGCTCACTGGAAATTTGAAAAACGCAGAAGTGGCTCTTGATGCACTAGC 1053
Query 897 AATCTGCATCAACGTAAATGCACTGCAGATGATGATATCACTTGGGTTTTTGGCAGCAGT 956
||||||| ||||| |||||| |||| ||||||||||| ||||||||||||||||||| |
Sbjct 1054 AATCTGCCTCAACATAAATGGACTGGAGATGATGATAGCACTTGGGTTTTTGGCAGCTGC 1113
Query 957 AAGTGTAAGAGTGTCCAACGAGCTCGGTA-TGGGAAACCCCAAAGGAGCCAAATTTGCAA 1015
||| ||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||
Sbjct 1114 AAGCGTAAGAGTGTCCAACGAGCTCGGTAGTGG-AAACCCCAAAGGAGCCAAGTTTGCAA 1172
Query 1016 CATTGATAGCGGTTTTCACGTCACTCTCTATAGGAATAGTTCTGTTCTTTGTCTTCTTGT 1075
|| | | ||||||||||| ||||||||| ||||||||||||| ||||| ||||||||||
Sbjct 1173 CACTAACCGCGGTTTTCACATCACTCTCTTTAGGAATAGTTCTATTCTTCGTCTTCTTGT 1232
Query 1076 TTCTAAGGGGAAGAATTTCCTACATTTTCACTACAAGTGAAGCCGTCGCAGCCGAAGTTG 1135
|||| || |||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1233 TTCTGAGAGGAAGAGTTTCCTACATTTTCACTACAAGTGAAGCTGTCGCAGCCGAAGTTG 1292
Query 1136 CCGATCTTTCTCCACTCTTAGCATTTTCCATCCTCCTGAATAGTATTCAACCCGTTCTCT 1195
||||||||||||| || ||||| |||||||||||| |||||||| |||||||||||||||
Sbjct 1293 CCGATCTTTCTCCGCTTTTAGCCTTTTCCATCCTCATGAATAGTGTTCAACCCGTTCTCT 1352
Query 1196 CTGGAGTGGCAGTCGGAGCGGGATGGCAAGGATATGTGGCTTACGTTAACCTTGCTTGCT 1255
||||||| || |||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1353 CTGGAGTTGCCGTCGGAGCTGGATGGCAAGGATATGTTACTTACGTTAACCTTGCTTGCT 1412
Query 1256 ATTACCTTCTGGGAATTCCTGTTGGTGTGATCCTTGGTTACGTCGTTGGTTTGCAAGTCA 1315
|||||||| | ||||||||| ||||| | ||||||||||| ||||||||||||||||| |
Sbjct 1413 ATTACCTTGTCGGAATTCCTATTGGTATTATCCTTGGTTATGTCGTTGGTTTGCAAGTGA 1472
Query 1316 AAGGTGTATGGATTGGAATGCTCTTTGGAATATTCGTTCAGACTTGTGTGCTTAGCATCA 1375
|||| |||||||| |||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1473 AAGGCGTATGGATCGGAATGCTCTTTGGAATATTCGTTCAGACTTGTGTGCTTACCGTCA 1532
Query 1376 TGACTCTCAGAACAGATTGGGATCAACAGGTATCTACGTCGTTGAGAAATATAAACCGGT 1435
||||||| ||||||||||||||||||||||| || |||||||||||| | |||| ||||
Sbjct 1533 TGACTCTGAGAACAGATTGGGATCAACAGGTGTCAACGTCGTTGAGACGTTTAAATCGGT 1592
Query 1436 GGGTTGTACCAGAATCTAGAGATGCAAACCAAATTTCATCAGAGGAATAA 1485
|||||||||||||||||||||| | ||||||| | |||||||||||||||
Sbjct 1593 GGGTTGTACCAGAATCTAGAGACGTAAACCAAGTATCATCAGAGGAATAA 1642
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73242595155
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5