BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg913522 Length=3786 Score E Sequences producing significant alignments: (Bits) Value AT1G42470.1 | Symbols: | Patched family protein | chr1:1592698... 6082 0.0 AT4G38350.2 | Symbols: | Patched family protein | chr4:1795817... 625 1e-177 > AT1G42470.1 | Symbols: | Patched family protein | chr1:15926987-15935208 FORWARD LENGTH=3899 Length=3899 Score = 6082 bits (3293), Expect = 0.0 Identities = 3610/3766 (96%), Gaps = 9/3766 (0%) Strand=Plus/Plus Query 1 ATGCAGATTCTGTTTGTTGGTTATGGAGTGGAAGCAAAACAATCAGCCGGATATTGTGCT 60 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1 ATGCAGATTCTGTTTGTTGGTTATGGAGTGGAAGCAAAACAATCAGCAGGATATTGTGCT 60 Query 61 ATGTATGATATCTGTGGAGCAAGAAGTGATGGGAAAGTACTAAATTGCCCTTTCAACATT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATGTATGATATCTGTGGAGCAAGAAGTGATGGGAAAGTACTAAATTGCCCTTTCAACATT 120 Query 121 CCTGCTGTGAAGCCTGATGATTTGTTATCTTCAAAGATTCAAAGCTTATGTCCAACAATC 180 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CCTTCTGTGAAGCCTGATGATTTGTTATCTTCAAAGATTCAAAGCTTATGTCCAACAATC 180 Query 181 ACTGGCAATGTTTGTTGCACAGAGACTCAATTTGATACATTACGTTCACAAGTTCAACAG 240 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 181 ACTGGCAATGTTTGTTGCACAGAGACTCAATTTGATACATTACGTTCGCAAGTTCAACAG 240 Query 241 GCTATTCCTTTCATTGTAGGTTGTCCAGCATGTTTGAGGAATTTTCTGAATCTTTTCTGT 300 ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||| Sbjct 241 GCTATTCCTTTTATTGTTGGTTGTCCAGCATGTTTGAGGAACTTTCTGAATCTTTTTTGT 300 Query 301 GAACTTACTTGTTCTCCGGATCAGAGTTTATTCATCAATGTAACTTCTACTACAAAGGTC 360 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 301 GAACTTACTTGTTCTCCGGATCAGAGTTTGTTTATCAATGTAACTTCTACTACAAAGGTC 360 Query 361 AAGAATAATTCGACTGTAGATGGGATTCAGTACTATATAACTGATGATTTTGGAGCGGGG 420 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 361 AAGAATAATTCTACTGTAGATGGAATTCAGTACTATATAACTGATGATTTTGGAGCTGGG 420 Query 421 ATGTATGAATCTTGCAAAAATGTGAAATTCGGTAGCTCTAATAGCCGAGCTTTAGACTTT 480 ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct 421 ATGTATGAATCTTGCAAAAATGTAAAATTTGGTAGCTCGAATAGCCGAGCTTTAGACTTT 480 Query 481 CTCGGAGCCGGTGCAAAGGATTTTAAGGAGTGGTTTGCATTTATTGGTCAGAAAGCGGGT 540 |||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||| Sbjct 481 CTCGGAGCCGGTGCAAAGAACTTTAAGGAGTGGTTTACATTTATTGGTCAGAAAGCGGGT 540 Query 541 GTCAATGTGCCAGGCTCACCGTATGGGATTGCGTTTTTGCCAACACCACCAGTGTCATCT 600 |||||| |||||||||||||||||||||| || |||||||||||||| || ||||| ||| Sbjct 541 GTCAATTTGCCAGGCTCACCGTATGGGATCGCTTTTTTGCCAACACCGCCTGTGTCGTCT 600 Query 601 GGAATGAGGCCTATGAATGTGTCTACTTATTCATGCGGTGATGAGTCTCTTGGCTGTTCT 660 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 601 GGAATGAGGCCTATGAATGTGTCTATTTATTCATGTGGTGATGAGTCTCTTGGCTGTTCT 660 Query 661 TGTGGTGATTGTCCTTCTGCAGCTACTTGCTCCAGTAAAGCAGAAGTTCCTACTCAGAAA 720 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 661 TGTGGTGATTGTCCTTCTGCAGCTACTTGCTCTAGTAAAGCAGAAGTGCCTACTCAGAAA 720 Query 721 AAGCACTCTTGTTCTATCAAAATTGGATCACTTGAGGCGAAATGTGTTGATTTCATACTA 780 || || ||||| |||||||| |||||||||||||||| ||||||||||||||||||| || Sbjct 721 AAACATTCTTGCTCTATCAAGATTGGATCACTTGAGGTGAAATGTGTTGATTTCATATTA 780 Query 781 GCCATTGTGTATATTGTATTGGTTTCACTGTTTCTCGGAGGCGGTTTACTTCACCGAGTA 840 |||||| |||||||||||||||||||| ||||||| ||||| ||||||||||||| |||| Sbjct 781 GCCATTTTGTATATTGTATTGGTTTCATTGTTTCTTGGAGGAGGTTTACTTCACCCAGTA 840 Query 841 AGGGGTAAGAAAAAGACCTCACAGATGAGACCATCGTCAGAAGCTGGTGGAGAGC-AAAG 899 ||||||||||||||||||||||||||| || ||| |||||||||| ||||||| | ||| Sbjct 841 AGGGGTAAGAAAAAGACCTCACAGATGGGAACATTGTCAGAAGCTAGTGGAGAACGAAA- 899 Query 900 TTCTGCTAATTTGCAAAAACCAGACACTA-TCCATGCACAGATGTTACAAAATACTCCAC 958 ||||| |||| ||||||||||||||||| || || | |||||||||||||||||||||| Sbjct 900 TTCTGTTAATCAGCAAAAACCAGACACTATTCAAT-CGCAGATGTTACAAAATACTCCAC 958 Query 959 AGAGAAACTGGGGTCAGCTATCGACAGTACAAGGACACTTGGCCAATTTTTACAGGAAGT 1018 |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct 959 AGAGAAACTGGGGTCAGCTATCGACAGTACAAGGACACTTGGCCAACTTTTACGGGAAGT 1018 Query 1019 ATGGGATTTGGGTAGCAAGACACCCAACTCTTGTTTTGTGTTTGTCAGTCTCTGTAGTTC 1078 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1019 ATGGGATTTGGGTAGCAAGACACCCCACTCTTGTTTTGTGTTTGTCAGTCTCTGTAGTTC 1078 Query 1079 TTCTCCTTTGTGTGGGTCTGATCCGATTCAAAGTGGAGACACGGCCTGATAAGCTATGGG 1138 ||||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||| Sbjct 1079 TTCTCCTTTGTGTGGGTCTGATCCGGTTCAAAGTTGAGACACGGCCTGATAAGCTGTGGG 1138 Query 1139 TAGGATCAGGGAGCAGAGCTGCTGAAGAGAAACAATTCTTTGACACCCATCTTGCTCCTT 1198 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1139 TAGGATCAGGTAGCAGAGCTGCTGAAGAGAAACAATTCTTTGACACTCATCTTGCTCCTT 1198 Query 1199 TCTACAGAATTGAACAGCTAATAATAGCAACAGTTCAAAAATCTTCTCACGAAAAGGCGC 1258 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1199 TCTACAGAATTGAACAGCTAATAATAGCAACAGTTCAAACATCTTCTCACGAAAAGGCGC 1258 Query 1259 CAGAGATTTTGACAGATGACAATATTAAGTTACTTTTTGACATACAAAAGAAGGTCGATG 1318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1259 CAGAGATTTTGACAGATGACAATATTAAGTTACTTTTTGACATACAAAAGAAGGTCGATG 1318 Query 1319 GACTTCGGGCAAATCACTCAGGTTCAATGGTTTCTCTGACAGATATTTGCATGAAACCCC 1378 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1319 GACTTCGGGCAAATCACTCAGGTTCAATGGTTTCTCTGACAGATATCTGCATGAAACCCC 1378 Query 1379 TGGGAGAGGATTGTGCCACACAGAGTGTTCTGCAG---TATTTCAAGATGAAACCAGAAA 1435 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 1379 TGGGAGAGGATTGTGCCACACAGAGTGTTCTGCAGCAGTATTTCAAAATGAAACCAGAAA 1438 Query 1436 ATTATGATGACTTTGGAGGCGTCGATCATGTTAAATATTGCTTTGAGCATTTCACCTCGA 1495 ||||||| |||| ||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 1439 ATTATGACGACTATGGAGGCGTTGATCATGTTAAATATTGTTTTGAGCATTTCACCTCGA 1498 Query 1496 CAGATTCATGTTTGAGTGCATTTAAGGGTCCACTTGATCCAACTACTGCACTGGGAGGTT 1555 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1499 CAGAATCATGTTTGAGTGCATTTAAGGGTCCACTTGATCCAACTACTGCACTGGGAGGTT 1558 Query 1556 TCTCAGGGAACAGTTTTAGTGAGGCTTCTGCTTTTCTTGTGACTTATCCTGTGGACAATG 1615 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1559 TCTCAGGGAACAGTTTTAGTGAGGCTTCTGCTTTTCTTGTGACTTATCCTGTGGACAATT 1618 Query 1616 CTGTTGACAATAAAGGTAACAAAACTGAGAAAGCAGTAGCATGGGAGAAAGCCTTTATCC 1675 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1619 TTGTTGACAATAAAGGTAACAAAACTGAGAAAGCAGTAGCATGGGAGAAAGCCTTTATCC 1678 Query 1676 AACTGGCCAAGGATGAGTTGTTGCCAATGGTTAAAGCAAAAAATTTAACTCTTTCTTTCT 1735 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1679 AACTGGCCAAGGATGAGTTGTTGCCAATGGTTCAAGCAAAAAATTTAACTCTTTCTTTCT 1738 Query 1736 CTTCGGAAAGTTCTATTGAAGAAGAATTGAAAAGAGAAAGCACAGCAGATGTCATAACTA 1795 | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1739 CGTCGGAAAGTTCTATTGAAGAAGAACTGAAAAGAGAAAGCACAGCAGATGTCATAACTA 1798 Query 1796 TAGCCATAAGTTATCTTGTCATGTTTGCCTATATATCACTCACACTTGGAGATTCACCTC 1855 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1799 TAGCCATAAGTTATCTTGTCATGTTTGCCTATATATCACTCACACTTGGAGATTCACCTC 1858 Query 1856 GCTTAAATTCCTTTTACATAACATCCAAGGTTCTGCTTGGTCTATCTGGTGTTCTACTTG 1915 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1859 GCTTAAAGTCCTTTTACATTACATCCAAGGTTCTGCTTGGTCTATCTGGTGTTCTACTTG 1918 Query 1916 TCATGCTTTCCGTCCTCGGCTCTGTAGGATTTTTCAGTGCCGTTGGGATGAAATCGACTC 1975 |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1919 TCATGCTTTCTGTCCTTGGCTCTGTAGGATTTTTCAGTGCCGTTGGGATGAAATCGACTC 1978 Query 1976 TTATAATAATGGAAGTTATACCTTTTCTTGTTTTGGCTGTCGGTGTTGATAATATGTGCA 2035 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1979 TAATCATAATGGAAGTTATACCTTTTCTTGTTTTGGCTGTCGGTGTTGATAATATGTGCA 2038 Query 2036 TACTGGTTCATGCTGTGAAGAGGCAAGAGCAAGAGCTGCCTTTGGAAAGACGAATAAGCA 2095 | |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| Sbjct 2039 TCCTGGTTCATGCTGTCAAGAGGCAAGAGCAAGAGCTGCCTTTGGAAAGAAGAATTAGCA 2098 Query 2096 ATGCCCTTATGGAAGTTGGACCATCGATTACTCTTGCAAGTTTAGCCGAGATTTTAGCTT 2155 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2099 ATGCCCTTATGGAAGTTGGACCATCGATTACTCTAGCAAGTTTAGCCGAGATTTTAGCTT 2158 Query 2156 TTGCTGTTGGTGCTTTTATTAAAATGCCAGCTGTTCGAGTGTTCTCCATGTTTGCTGCAT 2215 | |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 2159 TCGCTGTTGGTGCTTTCATTAAAATGCCAGCTGTTCGAGTATTCTCCATGTTTGCTGCAT 2218 Query 2216 TGGCTGTCCTTTTGGACTTTCTTCTCCAGATTACTGCGTTTGTAGCTTTGATAGTTTTTG 2275 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2219 TGGCTGTCCTTTTGGACTTTCTTCTCCAGATTACCGCGTTTGTAGCTTTGATAGTTTTTG 2278 Query 2276 ACTTCCAACGGACAGAGGATAAGCGGGTTGATTGCTTCCCATGTATTAAGACATCGAAAT 2335 |||||| |||||| ||||||||||| |||||||||||||| |||||||||||||| |||| Sbjct 2279 ACTTCCGACGGACGGAGGATAAGCGAGTTGATTGCTTCCCGTGTATTAAGACATCAAAAT 2338 Query 2336 CATCTAATAGCGCTGACAAAGGGGTTGGTCAGAGAAAAGCTGGCCTTTTGACTCGATATA 2395 |||||| ||| ||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct 2339 CATCTATTAGTGCTGAAAAAGGGGTTGGTCAAAGAAAAGCTGGCCTTTTGACTCGATATA 2398 Query 2396 TGAAGGAAGTCCATGCACCCGTTCTTAGCCATTGGGCAGTCAAAATATTGGTTATTGCCT 2455 ||||||||||||||||||| ||||||||||||||| |||||||||| |||| ||||||| Sbjct 2399 TGAAGGAAGTCCATGCACCTGTTCTTAGCCATTGGATAGTCAAAATAGTGGTCATTGCCT 2458 Query 2456 TCTTCTTTGGCTTAGCTATGGCTGGAATTGCAATGTCCACTCGGATTGAGCCTGGCTTGG 2515 |||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||| |||| Sbjct 2459 TCTTCTTTGGCTTAGCAATGGCTGGAATTGCATTGTCGACTCGTATTGAGCCTGGTTTGG 2518 Query 2516 AGCAACAGATTGTTCTTCCTCAAGACTCATATCTTCAGGGTTACTTCAACAATATTTCAA 2575 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2519 AGCAACAGATTGTTCTTCCTCAAGACTCATATCTTCAGGGTTACTTCAACAATATTTCTA 2578 Query 2576 CATATCTTCGTATTGGTCCACCTTTATACTTTGTTCTGAAGAATTATAACTACAGCTCAG 2635 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2579 CATATCTTCGAATCGGTCCACCTTTATACTTTGTTCTGAAGAATTATAACTACAGCTCAG 2638 Query 2636 AATCAAGACAGACTAATCAACTTTGTTCCATTAACAAGTGTGATTCTAACTCTCTTTTAA 2695 |||||||||| || ||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 2639 AATCAAGACATACAAATCAACTTTGTTCCATTAACAAGTGTAATCCTAACTCTCTTTTAA 2698 Query 2696 ATGAGATTGCAAGGGCTTCTTTGACTCCAGAACTAAGCTACATAGCTAAGCCAGCTGCTT 2755 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2699 ATGAGATTGCAAGGGCTTCTTTGACTCCGGAACTAAGCTACATAGCTAAGCCAGCTGCTT 2758 Query 2756 CATGGCTTGATGACTTTCTCGTGTGGTTATCTCCCGAGGCGTTTGGCTGTTGCCGAAAGT 2815 | ||||| ||||||||||| |||||||||||||||||||||||||| |||||| |||||| Sbjct 2759 CGTGGCTCGATGACTTTCTTGTGTGGTTATCTCCCGAGGCGTTTGGATGTTGCAGAAAGT 2818 Query 2816 TTACAAATGGTACCTTTTGCCCCCCTGATGACCAGCCTCCTTGTTGCTCTCCTGATCAAG 2875 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct 2819 TTACAAATGGTACCTTTTGCCCCCCTGATGACCAGCCTCCTTGTTGCCCTCCTGGTCAAA 2878 Query 2876 -GCAGCTGTGGCCTAAGTGAAGTATGCAAAGATTGTACCACGTGCTTCCGTCATGCAGAT 2934 | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2879 CG-AGCTGTGGCCTAAGTGAAGTATGCAAAGATTGTACCACGTGCTTCCGGCATGCAGAT 2937 Query 2935 TTAAGTAGTGACCGCCCATCCACAACCCAATTCAAAGAGAAACTTCCTTGGTTCCTCAAC 2994 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 2938 TTAAGTAGTGACCGCCCTTCCACAACACAATTCAAAGAGAAACTTCCTTGGTTCCTCAAC 2997 Query 2995 GCGCTTCCTTCCGCTGATTGTGCTAAAGGTGGACATGGTGCTTATTCTAGTAGTGTTGAT 3054 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2998 GCGCTCCCTTCTGCTGATTGTGCTAAAGGTGGACATGGTGCTTATTCTAGTAGTGTTGAT 3057 Query 3055 TTACAAGGCTATGAAAATGGTATAATTCAAGCTTCATCGTTCCGCACTTATCACACACCC 3114 || |||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 3058 TTGCAAGGCTATGCAAATGGTATCATTCAAGCTTCATCGTTCCGTACTTATCACACACCC 3117 Query 3115 CTTAACAAGCAGGCTGACTTTGTTAATTCAATGAGAGCTGCTCAAGAATTTAGTGCAAAA 3174 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3118 CTTAACAAGCAGGTTGACTTTGTTAATTCAATGAGAGCTGCTCAAGAATTTAGTGCAAAA 3177 Query 3175 GTTTCCCGTTCCTTAAAGATGGAGATATATCCATATTCAGTGTTTTATATGTTCTTTGAG 3234 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 3178 GTTTCCCGTTCCTTAAAGATGGAGATATATCCTTATTCAGTGTTTTATATGTTCTTTGAG 3237 Query 3235 CAATATCTTGACATATGGAAAACTGCACTAATCAACCTCTCCATAGCCATTGCTGCCGTG 3294 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 3238 CAATATCTTGACATATGGAAAACTGCATTAATCAACCTCTCCATAGCCATCGCTGCCGTG 3297 Query 3295 TTTGTCGTGTGTTTAATCATCACATGCAGCTTTTGGAGCTCCGCAATTATTTTGCTGGTG 3354 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 3298 TTTGTCGTGTGTTTAATCATCACATGCAGCTTTTGGAGCTCGGCAATTATTTTGCTGGTG 3357 Query 3355 ATCGCAATGATCATTATTGATCTCTTGGGAGTTATGGCAGTCTTTCATATCCAGCTAAAC 3414 ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 3358 ATCGCGATGATCATTATTGATCTCCTGGGAGTTATGGCAGTCTTTCATATCCAGCTAAAC 3417 Query 3415 GCACTATCGGTTGTAAATCTAATCATGTCCGTGGGCATAGCGGTTGAGTTTTGTGTGCAC 3474 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 3418 GCACTATCGGTTGTAAATCTAATCATGTCCGTGGGCATAGCGGTTGAGTTTTGCGTACAC 3477 Query 3475 ATAACACACGCTTTCTCGCACTGGGGACAGAAACCATCGGATGAAAGAGGCGTTGGGTGG 3534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3478 ATAACACACGCTTTCTCGCACTGGGGACAGAAACCATCGGATGAAAGAGGCGTTGGGTGG 3537 Query 3535 GATGGGAGCTTCAGTTTTCAGTGGAATTACATTGACGAAGCTAGTTGGGGTAATTGTGCT 3594 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 3538 GATGGGAGCTTCAGTTTTCAGTGGAATTACATTGACGAAACTAGTTGGGGTGATTGTGCT 3597 Query 3595 CAGTTTCTCAAGATCAGAAGTCTTTGTGGTCTACTACTTCAAGATGTATCTGGCACTAGT 3654 | |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct 3598 CGGTTTCTCAAGATCAGAAGTCTTTGTGGTGTACTACTTCAAGATGTATTTGGCACTAGT 3657 Query 3655 CCTCCTCGGTTTCTTGCACGGCCTTGTATTTTTACCGGTGTTCTTGAGCATGTTTGGTCC 3714 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 3658 CCTTCTCGGTTTCTTACACGGCCTTGTATTTTTACCGGTGTTCTTGAGCATGTTTGGTCC 3717 Query 3715 TTCTCCAAGACATGTAGAAGGGGAAAGGCAAGATCATCGACCTTCG 3760 |||||||||||||||||||||||||||||||||||||||||||| Sbjct 3718 AGCTCCAAGACATGTAGAAGGGGAAAGGCAAGATCATCGACCTTCG 3763 > AT4G38350.2 | Symbols: | Patched family protein | chr4:17958177-17966962 REVERSE LENGTH=4157 Length=4157 Score = 625 bits (338), Expect = 1e-177 Identities = 1538/2106 (73%), Gaps = 127/2106 (6%) Strand=Plus/Plus Query 1648 GCAGTAGCATGGGAGAAAGCCTTTATCCAACTGGCCAAGGATGAGTTGTTGCCAATGGTT 1707 |||||||||||||| ||| | || || ||| | || ||||| ||| || | || ||||| Sbjct 1878 GCAGTAGCATGGGAAAAATCGTTCATTCAATTAGCAAAGGAGGAGCTGCTACCTATGGTG 1937 Query 1708 AAAGCAAAAAATTTAACTCTTTC-TTTCTCTTCGGAAAGTTCTATTGAAGAAGAATTGAA 1766 | | || ||||| | ||| || ||| || || ||||| || || || ||||| |||| Sbjct 1938 CGATCCAAGAATTTGAGTCTGTCATTT-TCATCCGAAAGCTCAATAGAGGAAGAGCTGAA 1996 Query 1767 AAGAGAAAGCACAGCAGATGTCATAACTATAGCCATAAGTTATCTT-GTCATGTTTGCCT 1825 ||||||||| || || ||||| ||||| ||||| ||| ||| || || ||||||| | Sbjct 1997 AAGAGAAAGTACTGCTGATGTTATAACAATAGCTGCAAGCTAT-TTGGTTATGTTTGTTT 2055 Query 1826 ATATATCACTCACACTTGGAGATTCACCTC-GCTTAAATTCCTTTTACATAACATCCAAG 1884 | || || |||||||||||||| | || | | || || |||||||||| |||| ||| Sbjct 2056 ACATTTCGGTCACACTTGGAGATGCTCCGCAG-TTCTATACCTTTTACATTTCATCAAAG 2114 Query 1885 GTTCTGCTTGGTCTATCTGGTGTTCTACTTGTCATGCTTTCCGTCCTCGGCTCTGTAGGA 1944 ||| |||| ||||| || || ||| | |||||| ||||||| || || || ||||| ||| Sbjct 2115 GTTTTGCTCGGTCTTTCGGGGGTTGTGCTTGTCTTGCTTTCTGTACTTGGATCTGTTGGA 2174 Query 1945 TTTTTCAGTGCCGTTGGGA-TGAAATCGACTCTT-ATAATAATGGAAGTTATACCTTTTC 2002 ||||||||||| || ||| | ||||| || || || ||||||||||| || ||||| | Sbjct 2175 GTTTTCAGTGCCCTT-GGAGTTAAATCCAC-ATTGATCATAATGGAAGTCATTCCTTTCC 2232 Query 2003 TTGTTTTGGCTGTCGGTGTTGATAATATGTGCATACTGGTTCATGCTGTGAAGAGGCAAG 2062 | || ||||||| || || ||||||||||||||||||||||||||||| ||||| ||| Sbjct 2233 TAGTCCTGGCTGTGGGAGTAGATAATATGTGCATACTGGTTCATGCTGTAAAGAGACAAC 2292 Query 2063 AGCAAGAGCTGCCTTTGGAA-AGACGAATAAGCAATGCCCTTATGGAAGTTGGACCATCG 2121 | ||| | |||| || | |||||| ||| ||| ||| | ||||| || ||||| Sbjct 2293 CTCGTGAGGTTTCTTTAGAGCA-ACGAATTAGCTCTGCACTTGTTGAAGTAGGTCCATCC 2351 Query 2122 ATTACTCTTG-CAAGTTTAGCCGAGATTTTAGCTTTTGCTGTTGGTGCTTTTATTAAAAT 2180 || || ||| |||||||| ||||| | || |||||||||||||| |||||| || ||| Sbjct 2352 ATAACA-TTGGCAAGTTTATCCGAGGTCTTGGCTTTTGCTGTTGGAGCTTTTGTTCCAAT 2410 Query 2181 GCCAGC-TGTTCG-AGTGTTCTCCATGTTTGCTGCATTGGCTGTCCTTTTGGACTTTCTT 2238 |||||| ||| || | | |||||||||||||| ||||||||| | | ||||||| ||| Sbjct 2411 GCCAGCATGT-CGTA-TCTTCTCCATGTTTGCAGCATTGGCTATTATGCTGGACTT-CTT 2467 Query 2239 -CTCCAGATTACTGCGTTTGTAGCTTTGATAGTTTTTGACTTCCAACGGA-CAGAGGATA 2296 || || || || || ||||| || | ||||||||||||| | || | | | | ||||| Sbjct 2468 TCTGCAAATCACCGCTTTTGTTGCGCTAATAGTTTTTGACTGCAAAAG-ATCTGCGGATA 2526 Query 2297 AGCGGGTTGATTGCTTCCCATGTATTAAGACATCGAA-ATCATCTA-ATAGCGCTGACAA 2354 | || ||||||| ||||| || || || | || ||||||| | | ||| | Sbjct 2527 ATAGGATTGATTGTTTCCCTTGCATAAA-AGTTCCTTCATCATCTCGAGAAT-CTGTTGA 2584 Query 2355 AGGGGTTGGTCAGAGAAAAGCTGGCCTT-TTGACTCGATATATGAAGGAAGTCCATGCAC 2413 ||| | || || ||| |||| || |||| |||| |||||||| || ||||||| Sbjct 2585 AGG--T-GGA-AGGGAAC--CTGGGTTTCTTGAGA-GATACATGAAGGAGGTTCATGCAC 2637 Query 2414 CCGTTCTTAGCCATTGGGCAGTCAAAATATTGGTTATTG-C-CT-TCTTCTTTGGCTTA- 2469 |||||||| | | ||||| || |||| || |||| ||| | || | ||||| | ||| Sbjct 2638 CCGTTCTTGGACTTTGGGGTGT-AAAA-AT-GGTTGTTGTCGCTGTATTCTTCG-CTTTT 2693 Query 2470 GCTA-TGGCTGGAATTGCAAT--GTCCACTCGGATTGAGCCTGGCTTGGAGCA-ACAGAT 2525 || | |||| | ||||| || | ||| || |||| ||||||||||||| | | || Sbjct 2694 GC-ACTGGCAAGCATTGCCATCAGCCCAA--GGCTTGAAACTGGCTTGGAGCAGAAA-AT 2749 Query 2526 TGTTCTTCCTCAAGACTCATATCTTCAGGGTTACTTCAACAATATTTCA-ACATATCTTC 2584 ||||||||||| |||||| || ||||| | || || ||| | | ||| | || || | Sbjct 2750 TGTTCTTCCTCGAGACTCCTACCTTCAAGACTATTTTGACAGTCTCTCAGAG-TACCT-C 2807 Query 2585 -GTATTGGT-CCACCTTTATACTTTGTTCTGAAGAATTATAACTACAGCTCAGAATCAAG 2642 | | ||| || ||||| || |||||| | |||||||| || || ||||| |||||||| Sbjct 2808 AG-AGTGGGGCCGCCTTTGTATTTTGTTGTCAAGAATTACAATTATAGCTCGGAATCAAG 2866 Query 2643 ACAGACTAATCAACTT-TGTTCCATTAAC-AAGTGTGATTCTAACTCTCTTTTAAATGAG 2700 || || ||||| || || || || | | || || |||| || || |||||||||||| Sbjct 2867 GCATACAAATCAG-TTGTGCTCTATCAGCCAA-TGCAATTCGAATTCCCTTTTAAATGAG 2924 Query 2701 AT-TGCAAGGGCTTCTTTGACTCCAGA-ACTAAGCTACATAGCTAAGCCAGCTGCTTCAT 2758 || | |||| || || | || |||| || ||| ||||| || || ||||||||||| | Sbjct 2925 ATAT-CAAGAGCGTCACAGGCTTCAGATAC-AAGTTACATTGCCAAACCAGCTGCTTCTT 2982 Query 2759 GGCTTGATGACTTTCTCGTGTGGTTATCTCCCGAGGCGTTTGGCTGTTGCCGAAAGTTTA 2818 |||| ||||||||||| || ||| |||| || ||||| ||||||||||| || ||||| | Sbjct 2983 GGCTCGATGACTTTCTTGTATGGCTATCACCAGAGGCTTTTGGCTGTTGTCGGAAGTTCA 3042 Query 2819 CAAATGGTACCTT-TTGCCCCCCTGATGACCAGCCTCCTTGTTGCTCTCCTGATCAAGGC 2877 | ||||| | || ||| || || ||||||||||| ||||| ||| | |||| ||| Sbjct 3043 CTAATGGCAG-TTATTGTCCTCCAGATGACCAGCCACCTTGCTGCACGGCTGAGGAAGAT 3101 Query 2878 AGCTGTGGCCTA-A-GTGAAGTATGCAAAGATTGTACCACGTGCTTCCGTCA-TGCAGAT 2934 | || | || | | || | || ||||| |||||||| ||||| || || | ||||| Sbjct 3102 ATATGCAGTTTAGATGGGA--TCTGTAAAGACTGTACCACATGCTTTCGACACT-CAGAT 3158 Query 2935 TTAAGT--AGTGACCGCCCATCCACAACCCAATTCAAAGAGAAACTTCCTTGGTTCCTCA 2992 || || || || || ||||| ||| | ||||||| |||||||| || ||||| || | Sbjct 3159 TTG-GTTCAG-GATCGTCCATCTACAGCTCAATTCAGGGAGAAACTACCCTGGTTTCTAA 3216 Query 2993 ACGCGCTT-CCTTCCGCTGATTGTGCTAAAGG-TGGACATGGTGCTTATTCTAGTAGTGT 3050 | || || || || ||||| ||||| ||||| ||| || || |||||| | | ||| || Sbjct 3217 ATGCT-TTGCCATCGGCTGACTGTGC-AAAGGGTGGTCACGGGGCTTATACGAATAGCGT 3274 Query 3051 TGATTTACAAGGCTATGAAAATGGTATAATTCAAGCTTCATCGTTCCGCACTTATCACAC 3110 |||||| |||| ||||| | |||| | || || || || |||||| || || ||||| Sbjct 3275 GGATTTAAAAGGGTATGAGAGTGGTGTTATACAGGCATCGGAGTTCCGTACATACCACAC 3334 Query 3111 ACCCCTTAACA-AGCA-GGCTGACTTTGTTAATTCAATGAGAGCTGCTCAAGAATTTAGT 3168 || ||||||| | || || ||||| ||||||| || || ||||||||| || || ||| Sbjct 3335 TCCACTTAACACA-CAAGG-TGACTATGTTAATGCACTGCGAGCTGCTCGGGAGTTCAGT 3392 Query 3169 GCAA-AAGTTTCCCGTTCCTTAAAGATGGAGATATATCCATATTCAGTGTTTTATATGTT 3227 ||| || | ||| |||||| ||||| || || | ||||||||| || || || || || Sbjct 3393 TCAAGAA-TATCCAATTCCTTGAAGATTGACATCTTTCCATATTCTGTCTTCTACATTTT 3451 Query 3228 CTTTGAGCAATATCTTGACATAT--GGAAAACT-GCACTAATCAA-CCTCTCC-ATAGCC 3282 ||||||||||||||| || |||| ||| | | || | | ||| ||| | | ||||| Sbjct 3452 CTTTGAGCAATATCT-GA-ATATCTGGACAG-TAGCTTTGA-CAAACCT-TGCTATAGCA 3506 Query 3283 ATTGCTGCCGTGTTTGTCGTGTGTTTAATCATCACATGCAGCTTT-TGGAGCTCCGCAAT 3341 || | ||| | ||| | || || | | ||||| | ||| | ||||| || || || Sbjct 3507 ATCGGTGCTATATTTATTGTTTGCTGGTTAATCACTTCCAG-TGCCTGGAGTTCAGCCAT 3565 Query 3342 TATTTTGCTGGTGATCGCAATGATCATTATTG-ATCTCTTGGG-AGTTATGGC-AGTCTT 3398 ||| | || ||| | | ||||| | | || ||||| |||| | | |||| | ||| Sbjct 3566 CATTGTCCTTGTGTTAGTGATGAT-ACTCGTGGATCTCATGGGTA-TGATGGTGATTCTA 3623 Query 3399 T-CATATCCAGCTAAACGCACTATCGGTTGTAAATCTAATCATGTCCGT-GGGCATAGCG 3456 ||| ||| || || ||| | || ||||| ||| | || ||||| | ||| || || Sbjct 3624 GGCAT--CCAACTCAATGCAGTTTCTGTTGTGAATTTGATAATGTCAATCGGG-ATTGCT 3680 Query 3457 GTTGAGTTTTGTGTGCACATAACACACGCTTTC-TC--GC--ACTGGGGACAGA-AACCA 3510 || || || || ||||||||| |||| |||||| | | | |||||||||| ||| | Sbjct 3681 GTAGAATTCTGCGTGCACATATCACATGCTTTCCTGATGAGTAGTGGGGACAGAGAAC-A 3739 Query 3511 TCG-GATGAAAGAGGCGTTGGGTGGGATGGGAGCTTCAGTTTTCAGTGGAATTACATTGA 3569 | | | || ||||| ||| ||||||||||||||||||||||| || ||| | | Sbjct 3740 TAGAGC-GAGGGAGGCACTGGAAACCATGGGAGCTTCAGTTTTCAGTGGGATCACACTCA 3798 Query 3570 CGAAGCTAGTTGGGGTAATTGTGCTCAG-TTTCTCAAGATCAGA-AGTCTTTGTGGTCTA 3627 | || || ||||| || || ||||| | ||| ||||||| || | | |||||||| || Sbjct 3799 CAAAACTTGTTGGAGTGATCGTGCTTTGCTTTG-CAAGATCTGAGA-TATTTGTGGTGTA 3856 Query 3628 CTACTTC-AAGATGTATCT-GGCACTAGTCCTCCTCGGTTTCTTGCACGGCCTTGTATTT 3685 |||||| || ||||| || ||| | || | |||| |||||||| || || || ||| Sbjct 3857 TTACTTCCAA-ATGTA-CTTGGCTTTGGTTATAATCGGCTTCTTGCATGGGCTCGT-TTT 3913 Query 3686 -TTACC 3690 ||||| Sbjct 3914 CTTACC 3919 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 188577538737 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5