BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg914721 Length=984 Score E Sequences producing significant alignments: (Bits) Value AT1G55910.1 | Symbols: ZIP11 | zinc transporter 11 precursor | ... 1548 0.0 > AT1G55910.1 | Symbols: ZIP11 | zinc transporter 11 precursor | chr1:20906134-20907413 FORWARD LENGTH=1196 Length=1196 Score = 1548 bits (838), Expect = 0.0 Identities = 936/984 (95%), Gaps = 3/984 (0%) Strand=Plus/Plus Query 1 Atgtctcgtcctcttgtcttcttcttcttcctctttcttgtcttggtcgtcccttgtctc 60 ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 28 ATGTCTCGTTCTCTTG---TCTTCTTCTTCCTCTTTCTTGTCTTGGTCGTCCCTTGTCTC 84 Query 61 tccCATGGAACCGGAGGAGACCACGACGACGATGAGGCTCCGCACGTTAAGAGTTCCGAT 120 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 85 TCCCATGGAACCGGAGGAGACCACGACGACGATGAGGCTTCGCACGTTAAGAGTTCCGAT 144 Query 121 CTCAAATCTAAATCCTTAATCTCTGTCAAGATCGCATGTCTTGTCATCATCTTTGTCCTC 180 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 145 CTCAAATCCAAATCCTTAATCTCCGTCAAGATCGCATGTCTTGTCATCATCTTTGTCCTC 204 Query 181 ACGTTTATCAGCGGCGTCTCTCCTTATTTCTTGAAATGGAGTCAAGGGTTGTTGGTTCTT 240 ||||| || ||||| || ||||||||||||||||||||||| |||||||| ||||||||| Sbjct 205 ACGTTCATAAGCGGTGTATCTCCTTATTTCTTGAAATGGAGCCAAGGGTTTTTGGTTCTT 264 Query 241 GGAACACAATTCGCCGGTGGAGTGTTTCTTGCAACCGCCTTGATGCATTTCTTGTCTGAT 300 || |||||||||||||| || ||||||||||||||||||||||||||||||||||| || Sbjct 265 GGTACACAATTCGCCGGAGGCGTGTTTCTTGCAACCGCCTTGATGCATTTCTTGTCGGAC 324 Query 301 GCTGATGAGACGTTTCGTGATTTGTTGACGGCGGAAGGAGAGTCAGAGCCATCTCCGGCT 360 ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct 325 GCTGATGAGACGTTTCGTGGTTTGTTGACGGCGGAAGGAGAGTCGGAGCCATCTCCGGCT 384 Query 361 TACCCATTTGCTTACATGTTGGCTTGTGCTGGTTTTATGATAACCATGCTTGCTGATTCT 420 |||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||| Sbjct 385 TACCCATTTGCTTATATGTTGGCTTGTGCTGGTTTTATGTTGACCATGCTTGCTGATTCT 444 Query 421 GTCATCACTCATATCTACTCAAAGACCCAAAACGATTTGGAGCTTCAAGGAGAAGACAAA 480 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 445 GTCATCGCTCATATCTACTCAAAGACCCAAAACGATTTGGAGCTTCAAGGAGAAGACAAA 504 Query 481 TCGAATCAGACGTCAGCAACAACTGAAACATCGATTGGAGATAGCATTCTATTGATCGTA 540 |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 505 TCGAATCAGAGGTCAGCAACAACTGAAACTTCGATTGGAGATAGCATTCTATTGATCGTA 564 Query 541 GCTCTCTGTTTTCACTCTGTCTTCGAAGGCATAGCTATTGGTATCTCAGAGACTAAATCA 600 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 565 GCTCTCTGTTTTCACTCTGTCTTCGAAGGCATAGCTATTGGTATTTCAGAGACTAAATCA 624 Query 601 GATGCTTGGAGAACTCTATGGACAATAACACTCCACAAGATATTTGCAGCGATTGCAATG 660 |||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 625 GATGCTTGGAGAGCTCTCTGGACAATAACACTCCATAAGATATTTGCAGCGATTGCAATG 684 Query 661 GGAATTGCTCTTCTCCGTATGATCCCTGACCGTCCTTTGTTCTCATCAATCACTTATTCT 720 || || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 685 GGGATAGCTCTTCTCCGTATGATCCCTGACCGTCCTTTATTCTCCTCAATCACTTATTCT 744 Query 721 TTCGCATTCGCCATCTCGAGCCCAATCGGTGTTGCTATTGGAATAGTAATCGATGCAACG 780 |||||||||||||||||||||||||| |||||||| || || ||||| |||||||||||| Sbjct 745 TTCGCATTCGCCATCTCGAGCCCAATTGGTGTTGCCATCGGGATAGTCATCGATGCAACG 804 Query 781 ACTCAAGGATCGGTCGCGGATTGGATTTTCGCAGTGTCGATGAGCTTGGCGTGTGGGGTA 840 |||||||| || ||||||||||||| |||||| |||||||||||||||||||||||||| Sbjct 805 ACTCAAGGGTCCATCGCGGATTGGATATTCGCATTGTCGATGAGCTTGGCGTGTGGGGTA 864 Query 841 TTTGTGTATGTCTCGGTGAACCATTTGTTGGCAAAAGGGTATCGACCAAACAAGAAGGTT 900 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 865 TTTGTGTATGTATCTGTGAACCATTTGTTGGCAAAAGGGTATCGACCAAACAAGAAAGTT 924 Query 901 CATGTGGATGAGCCTCGTTATAAGTTTTTGGCTGTGTTGTTTGGAGTTGTTGTCATTGCC 960 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 925 CATGTTGATGAGCCTCGTTATAAGTTTTTGGCTGTGTTGTTTGGAGTTGTTGTCATTGCC 984 Query 961 ATTGTTATGATATGGGACACTTGA 984 |||||||||||||||||||||||| Sbjct 985 ATTGTTATGATATGGGACACTTGA 1008 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 48174546973 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5