BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg915887
Length=720
Score E
Sequences producing significant alignments: (Bits) Value
AT5G43520.1 | Symbols: | Cysteine/Histidine-rich C1 domain fam... 1085 0.0
AT2G44380.1 | Symbols: | Cysteine/Histidine-rich C1 domain fam... 455 3e-127
AT2G28270.1 | Symbols: | Cysteine/Histidine-rich C1 domain fam... 333 1e-90
AT2G44370.1 | Symbols: | Cysteine/Histidine-rich C1 domain fam... 189 3e-47
AT2G17740.1 | Symbols: | Cysteine/Histidine-rich C1 domain fam... 156 3e-37
> AT5G43520.1 | Symbols: | Cysteine/Histidine-rich C1 domain family
protein | chr5:17485439-17486191 REVERSE LENGTH=753
Length=753
Score = 1085 bits (587), Expect = 0.0
Identities = 673/713 (94%), Gaps = 12/713 (2%)
Strand=Plus/Plus
Query 10 GCACGCGAGTCACAACCATCCAC-CCGTGTCTTTAAAGCCAAAGAAGAGGATGAGACCGC 68
|||| | |||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 51 GCACCCAAGTCACAACCATCCGCTGCGTGTCTTTAAAGCCAAAGAAGAGGATGAGACCGC 110
Query 69 ATGCTCTGGCTGCGAGCTAGAGCTGACCGGGCAAGCTTTCAAGTGTACAAAGTCAGAATG 128
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||
Sbjct 111 ATGCTCTGGCTGCGAGCTAGAGCTGACCGGGCAAGCTTTCAAATGTATAAAGTCAGAGTG 170
Query 129 CGATTACTTCTTGCACAAGTCATGTTTCGACCTACCTAATGAGACCAATCACAAGTCTCA 188
|||||||||||| |||||||||||||||||||| |||| |||||||||| ||||||||||
Sbjct 171 CGATTACTTCTTACACAAGTCATGTTTCGACCTTCCTAGTGAGACCAATAACAAGTCTCA 230
Query 189 CCAGGACCACCCTCTGACCTTGCTTCATTCCCCACCAGATGATCGGTCTGTTTACACGTG 248
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 231 CCAGGACCACCCTCTGACCTTGCTTCATTCCCCACCAGATGATCGGTCTGTCTACACGTG 290
Query 249 TGACGCGTGTGACCAATACGGATCTGGATTCACTTACCATTTCTCAAACTGCAACTACAA 308
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 291 TGACGCGTGTGACCAATACGGATCTGGATTTTCTTACCATTGCTCAAACTGCAACTACAG 350
Query 309 TCTTCATGTGGGATGTGCGTTTATCCCTGAAACCGTAGATCGTGAAGATCATGAACATCC 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 351 TCTTCATGTGGGATGTGCGTTTATCCCTGAAACCGTAGATCGTGAAGATCATGAACATCC 410
Query 369 ACTCACTCTTCTTTATTGCACACCGTGTAAAGGTCGTGAAGACACG-ATCTTCACTTGCA 427
||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||
Sbjct 411 ACTCACTCTTCTTTATTGCACACCGTGTAAAGGACGTGAAGACACGTA-CTTCACTTGCA 469
Query 428 GCGTTTGTGATGAAACTATTTCAGAAGATCTATGGATGTATTACTGTAAGGAATGTGACT 487
||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 470 GCGCTTGTGATGAAACTATTTCAGAAGATCTATGGATGTATTACTGTAAGGATTGTGACT 529
Query 488 ATGGAACACATGTACATTCATGTGCGGCATATgaagatcaagaatcaaatgaagaggaag 547
||||||||||| |||| |||||||||||||||||||| |||| ||| || |||
Sbjct 530 ATGGAACACATCTACACTCATGTGCGGCATATGAAGACCAAGG-------GAA-AG-AAG 580
Query 548 aagaagaagaagacgaagaaggagaagCGAGTTCTCCAGCTTCTAGGATAAAGTCTTTGA 607
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 581 AAGAAGATGAAGACGAAGAAGGAGAAGCGAGTTCTCCAGCTTCTAGGATAAAGTCGTTGA 640
Query 608 TGAAGGCGCAAGACGAGATGGCGGCTATGCAGCTAGAGGCACGTATTGCGAATGATGCGA 667
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 641 TGAAGGCGCAAGACGAGATGGCGGCTATGCAGCTAGAGGCACGTATTGAGAATGATGCGA 700
Query 668 GGAATGCTGCGCTTGATCTTTGGGATGAACCAAAACGTAGATACTATTGGTGA 720
|||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 701 GGAATGCTGCACTTGATCTGTGGGATGAACCAAAACGTAGATACTATTGGTGA 753
> AT2G44380.1 | Symbols: | Cysteine/Histidine-rich C1 domain family
protein | chr2:18323461-18324428 REVERSE LENGTH=968
Length=968
Score = 455 bits (246), Expect = 3e-127
Identities = 527/659 (80%), Gaps = 33/659 (5%)
Strand=Plus/Plus
Query 10 GCACGCGAGTCACAACCATCCAC-CCGTGTCTTTAAAGC-CAAAGAAGAGGATGAGACCG 67
||||||||||||||||||||| | |||||||||||||| | ||| || |||||| ||
Sbjct 134 GCACGCGAGTCACAACCATCCGCTGCGTGTCTTTAAAGCTC-GAGACGAAGATGAGGTCG 192
Query 68 CATGCTCTGGCTGCGAGCTAGAGCTGACCGGGCAAGCTTTCAAGTGTACAAAGTCAGAAT 127
|||||||| |||||||| ||||| ||||| |||||||||||||||| |||||||| |
Sbjct 193 TTTGCTCTGGATGCGAGCTCGAGCTAACCGGACAAGCTTTCAAGTGTATGAAGTCAGATT 252
Query 128 GCGATTACTTCTTGCACAAGTCATGTTTCGACCTACCTAATGAGACCAATCACAAGTCTC 187
| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 253 GTGATTACTTCTTGCACAAGTCATGTTTCGACCTACCTCGTGAAACCAATCACAAGTCTC 312
Query 188 ACC-AGGACCACCCTCTGACCTTGCTTCATTCCCCACCAGATGATCGGTCTGT-TTACAC 245
||| | ||||| || ||||| |||||||||||||||| | | | ||||| || ||||||
Sbjct 313 ACCCAA-ACCACTCTTTGACCCTGCTTCATTCCCCACC-G-T-A-CGGTCAGTCTTACAC 367
Query 246 GTGTGACGCGTGTGACCAATACGGATCTGGATTCACTTACCATT-T-CTCAAACTGCAAC 303
|| ||||| || | | ||||||||||| ||||||||| ||| | || || | |||
Sbjct 368 ATGCGACGCATGCGGTGAGTACGGATCTGGTTTCACTTACAATTGTTCTGAATGT-CAA- 425
Query 304 TACAATCTTCATGTGGGATGTGCGTTTATCCCTGAAACCGTAGATCGTGAAGATCATGAA 363
|| || ||||||| |||||||| ||||||||||| ||||| || || |||||||| |||
Sbjct 426 TATGATGTTCATGTCGGATGTGCTTTTATCCCTGAGACCGTGGAGCGCGAAGATCACGAA 485
Query 364 CATCCACTCACTCTTCTTTATTGCACACCGTGTAAAGGTCGTGAAGACAC-GATC--TTC 420
|| |||||||| ||||| || |||||| || ||||||||||| ||| | | |||
Sbjct 486 CACCCACTCACGCTTCTCTACAACACACCATGCAAAGGTCGTGAGGACGGTGCTAAGTTC 545
Query 421 AC-T-TGCAGCGTTTGTGATGAAACTATTTCAGAAGATCTATGGATGTATTACTGTAAGG 478
| | || | |||||||| |||| || || ||| |||| ||| | |||||||| || |
Sbjct 546 ATATGTG-AT-GTTTGTGAAGAAAAAATGTCGGAAAATCTTTGGGTTTATTACTGCAAAG 603
Query 479 AATGTGACTATGGAACACATGTACATTCATGTGCGG-CATATgaagatcaagaatcaaat 537
| ||||| ||||| || ||||| ||||| || |||| | ||||||||||| || ||| |
Sbjct 604 AGTGTGATTATGGGACGCATGTGCATTCTTGCGCGGTC-TATGAAGATCATGAGTCAGA- 661
Query 538 gaagaggaagaagaagaagaagacgaagaaggagaagCGAGTTCTCCAGCTTCTAGGAT- 596
||| || | || || | || | ||||||||||||||||| ||| | | ||| |||||
Sbjct 662 GAAAAG-AGGAGGAGGTAG--G--GAAGAAGGAGAAGCGAGCTCTGCGGTTTCAAGGATG 716
Query 597 AAAGTCTTTGATGAAGGCGCAAGACGAGATGGCGGC-TATGCAGCTAGAGGCACGTATT 654
||| || ||||||||||| ||||| ||||||||||| | | ||||| ||||||||||||
Sbjct 717 AAA-TCGTTGATGAAGGCTCAAGATGAGATGGCGGCGT-TACAGCTCGAGGCACGTATT 773
> AT2G28270.1 | Symbols: | Cysteine/Histidine-rich C1 domain family
protein | chr2:12053542-12054398 FORWARD LENGTH=857
Length=857
Score = 333 bits (180), Expect = 1e-90
Identities = 446/571 (78%), Gaps = 31/571 (5%)
Strand=Plus/Plus
Query 8 GAG-CACGCGAGTCACAACCATCC-ACCCGTGTCTTTAAAGCCAAAGAAGAGGATGAGAC 65
||| ||| |||||||||| ||||| || ||||| || |||||||||| |||||||
Sbjct 143 GAGACACCCGAGTCACAATCATCCGTTGCGGGTCTTCAACTCCAAAGAAGAAGATGAGAT 202
Query 66 CGCATGCTCTGGCTGCGAGCTA-GAGCTGACCGGGCAAGCTTTCAAGTGTACAAAGTCAG 124
| ||||| || ||||| | | || || | ||||||||||||||||||||||||||||
Sbjct 203 CATTTGCTCCGGATGCGAAC-ATGATCTAATTGGGCAAGCTTTCAAGTGTACAAAGTCAG 261
Query 125 AATGCGATTACTTCTTGCACAAGTCATGTTTCGACCTACCTAATGAGA-CCAATCACAAG 183
| ||||||||||||||||||||||||||||||||||| || ||||| ||| |||||||
Sbjct 262 AGTGCGATTACTTCTTGCACAAGTCATGTTTCGACCTTCCCGGTGAGATCCA-TCACAAG 320
Query 184 TCTCAC-CAGGACCACCCTCTGACCTTGCTTCATTCCCCACCAGA-TGATCGGTCTGTTT 241
|||||| || | |||||| |||||||||| ||||| ||||| || || | || ||
Sbjct 321 TCTCACACAA-ATCACCCTTTGACCTTGCTCCATTCTCCACC-GAATGGCCTATCCACTT 378
Query 242 ACACGTGTGACGCGTGTGACCAATACGGATCTGGATTCACTTACCATTTCTCAAACTGCA 301
||||||| || ||||| | | || ||||||| ||||||||||||| |||| | ||||
Sbjct 379 ACACGTGCGATGCGTGCGGTGAGTATGGATCTGCTTTCACTTACCATTGCTCAGAGTGCA 438
Query 302 ACTACAATCTTCATGTGGGATGTGCGTTTATCCCTGA-AACCGTAGAT-CGTGAAGATCA 359
| ||| || |||| ||||||||||||||| |||| || ||| || || |||||||||||
Sbjct 439 AATACCATGTTCACGTGGGATGTGCGTTTGTCCCCGAGAAC-GT-GAAGCGTGAAGATCA 496
Query 360 TGAACATCCACTCACTCTTCTTTATTGCACACCGTGTAAAGGTCGTGAAG-ACAC-GA-- 415
||||| ||||||||||| ||||| |||||| || ||||||||| ||| || |
Sbjct 497 CGAACACCCACTCACTCTACTTTACAACACACCATGCAAAGGTCGT-AAGGACGGTGTGG 555
Query 416 TCTTCAC-T-TGCAGCGTTTGTGATGAA-ACTATTTCAGAAGA-TCTATGGATGTATTAC 471
| |||| | || | ||||| || | | | | | || || || ||| ||| ||||||||
Sbjct 556 TGTTCATATGTG-AT-GTTTGCGAAGTAGA-TGTGTCGGA-GAATCTTTGGGTGTATTAC 611
Query 472 TGTAAGGAATGTGACTATGGAACACATGTACATTCATGTGCGGCATATgaagatcaa-ga 530
|| || |||||||||||||| |||||||| |||||||| || || ||||||| ||| |
Sbjct 612 TGCAAAGAATGTGACTATGGGACACATGTTCATTCATGCACGACAAATGAAGA-CAATGG 670
Query 531 atcaaatgaag-aggaagaagaagaagaaga 560
|||| ||| |||| |||||||||| |||
Sbjct 671 GCCAAAAAAAGGAGGA-GAAGAAGAAGGAGA 700
> AT2G44370.1 | Symbols: | Cysteine/Histidine-rich C1 domain family
protein | chr2:18321994-18323121 REVERSE LENGTH=1128
Length=1128
Score = 189 bits (102), Expect = 3e-47
Identities = 244/311 (78%), Gaps = 15/311 (5%)
Strand=Plus/Plus
Query 70 TGCTCTGGCTGCGAGCTAGAGCTGACCGG-GCAAGCTTTCAAGTGTACAAAGTCAGAATG 128
|||||||| ||||| || || |||| || || ||||||||| || ||||||||||||||
Sbjct 355 TGCTCTGGTTGCGACCTCGACCTGATAGGTGC-AGCTTTCAAATGCACAAAGTCAGAATG 413
Query 129 CGATTACTTCTTGCACAAGTCATGTTTCGACCTACCTAA-TGAGAC-CAATCACAAGTCT 186
||||||||||||||||||||||||||| || || || | |||||| | ||||||| ||
Sbjct 414 CGATTACTTCTTGCACAAGTCATGTTTTGAGCTTCC-ACGTGAGACTCG-TCACAAGGCT 471
Query 187 CACCAGGACCACCCTCTGAC-CTTGCT-TCATTCCCCACCAGATGATCGGTCTGTTTACA 244
|||| ||| |||||| ||| || ||| | |||||||||| | || | || |||||
Sbjct 472 CACCCGGATCACCCTTTGATACT-GCTGT-ATTCCCCACCTTACGA--G-TCAACTTACA 526
Query 245 CGTGTGACGCGTGTGACCAATACGGATCTGGATTCACTTACCATTTCTCAAACTGCAACT 304
||||||| ||||| | | || ||||| |||||||||||| | | ||| | |||| | |
Sbjct 527 CGTGTGATGCGTGCGGTGAGTATGGATCCGGATTCACTTACAACTGCTCTATCTGCCAGT 586
Query 305 ACAATCTTCATGTGGGATGTGCGTTTATCCCTGAAACCGTAGATCGTGAAG-ATCATGAA 363
|| || ||||||| ||||||| || || ||||| |||| || ||||||| | || | |
Sbjct 587 ACGATGTTCATGTTGGATGTGTGTCCATGCCTGAGTCCGTGGAGCGTGAAGGA-CACGCA 645
Query 364 CATCCACTCAC 374
|||||||||||
Sbjct 646 CATCCACTCAC 656
> AT2G17740.1 | Symbols: | Cysteine/Histidine-rich C1 domain family
protein | chr2:7706896-7707861 REVERSE LENGTH=966
Length=966
Score = 156 bits (84), Expect = 3e-37
Identities = 264/348 (76%), Gaps = 24/348 (7%)
Strand=Plus/Plus
Query 8 GAG-CACGCGAGTCACAACCATCC---ACCCGTGTCTTTAAAGCCAAAGAAGAGGATGAG 63
||| ||| |||| ||||||||||| || || ||| |||||| ||| || ||||||
Sbjct 54 GAGACACCCGAGCCACAACCATCCATTACGCG-GTC-ACAAAGCCCAAGTTGAAGATGAG 111
Query 64 A-CCGCATGCTCTGGCTGCGAGCTAGAGCTGAC-CGG-GCAAGCTTTCAAGTGTACAAAG 120
| | | |||||||| ||||| ||||| || || ||| || | ||||||||| ||||||
Sbjct 112 ATCATC-TGCTCTGGTTGCGACCTAGACCT-ACTCGGTGC-ATATTTCAAGTGCACAAAG 168
Query 121 TCAGAATGCGATTACTTCTTGCACAAGTCATGTTTCGACCTACCTAA-TGAGA-CCAATC 178
||||| || ||||||||||||||||||||||||||||| || || | ||||| || ||
Sbjct 169 TCAGAGTGTGATTACTTCTTGCACAAGTCATGTTTCGATCTCCC-ACGTGAGATCCG-TC 226
Query 179 ACAAGTCTCACCAGGACCACCCTCTGA-CCTTGCT-TCATTCCCCACCAGA-TGATCGGT 235
|||||||||||| || |||||| ||| ||| || | ||||||||| ||| | || |
Sbjct 227 ACAAGTCTCACCCTGATCACCCTTTGATCCTC-CTCT-ATTCCCCAC-AGAATAATAATT 283
Query 236 CTGTTTACACGTGTGACGCGTGTGACCAATACGGATCTGGATTCACTTACCATT-TCTCA 294
| || || |||||||| || | | || ||||| || ||||||||| ||| | ||
Sbjct 284 CAACGTATACTTGTGACGCATGCGGTGAGTATGGATCGGGGTTCACTTACAATTGT-TCT 342
Query 295 AACTGCAACTACAATCTTCATGTGGGATGTGCGTTTATCCCTGAAACC 342
| |||| | ||| || ||||||| ||||||| || | | ||||| |||
Sbjct 343 ATCTGCCAGTACGATGTTCATGTTGGATGTGTGTCTGTGCCTGAGACC 390
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 34912732165
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5