BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg915889 Length=357 Score E Sequences producing significant alignments: (Bits) Value AT5G23290.1 | Symbols: PFD5 | prefoldin 5 | chr5:7846081-784764... 544 3e-154 > AT5G23290.1 | Symbols: PFD5 | prefoldin 5 | chr5:7846081-7847643 FORWARD LENGTH=734 Length=734 Score = 544 bits (294), Expect = 3e-154 Identities = 333/352 (95%), Gaps = 2/352 (1%) Strand=Plus/Plus Query 1 ATGGTGTCGTCATCATCGAGAGGAGAGATGGAGAAGATGGGAATCGATCAGCTGAAGGCG 60 |||| |||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 64 ATGGCGTCGTCATCATCGAGAGGAGAGATGGAGAAGATGGGAATCGATCAGCTAAAAGCT 123 Query 61 TTAAAGGAGCAAGCAGATCTGGAAGTGAATCTCCTTCAAAATAGTCTTAACAGCATCCGT 120 || ||||||||||||||||||||||||||||| |||||| ||||||| |||| ||||||| Sbjct 124 TTGAAGGAGCAAGCAGATCTGGAAGTGAATCTTCTTCAAGATAGTCTCAACAACATCCGT 183 Query 121 ACAGCCACCGTCCGTCTTGATGCCGCCGCCGCAGCTCTCAACGATCTCTCTCTTCGACCT 180 ||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 184 ACAGCTACCGTTCGTCTCGATGCCGCCGCCGCAGCTCTCAACGATCTCTCTCTTCGACCT 243 Query 181 CAAGGTAAGAAGATGCTTGTACCACTGACTGCTTCTCTATACGTTCCTGGGACACTTGAT 240 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 244 CAAGGTAAGAAGATGCTTGTACCACTGACTGCTTCTCTATACGTGCCTGGGACACTTGAT 303 Query 241 GAAGCTGATAAGGTTTTGGTTGATATTGGCACTGGTTACTTCGTCGAGAAAACAATGGAT 300 ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||| Sbjct 304 GAAGCTGATAAGGTTTTAGTTGATATTGGCACTGGTTACTTCATTGAGAAAACAATGGAT 363 Query 301 GATGGAAAAGATTATTGTCAGAGGAAGATTCA-CTTGCTCAAATCAAACTTT 351 ||||||||||||||||||||||||||||| || |||||||||||| |||||| Sbjct 364 GATGGAAAAGATTATTGTCAGAGGAAGAT-CAACTTGCTCAAATCCAACTTT 414 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 16739160417 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5