BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg916001
Length=3669
Score E
Sequences producing significant alignments: (Bits) Value
AT5G11250.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 1818 0.0
AT3G04220.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 952 0.0
AT5G38340.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 763 0.0
AT3G25510.1 | Symbols: | disease resistance protein (TIR-NBS-L... 544 3e-153
AT3G03855.1 | Symbols: | pseudogene of disease resistance prot... 518 2e-145
AT3G44630.3 | Symbols: | Disease resistance protein (TIR-NBS-L... 394 3e-108
AT3G44480.1 | Symbols: RPP1, cog1 | Disease resistance protein ... 363 9e-99
AT3G44400.1 | Symbols: | Disease resistance protein (TIR-NBS-L... 248 3e-64
> AT5G11250.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) | chr5:3587978-3591960 REVERSE LENGTH=3570
Length=3570
Score = 1818 bits (984), Expect = 0.0
Identities = 2137/2672 (80%), Gaps = 165/2672 (6%)
Strand=Plus/Plus
Query 11 CTTCTTC-TTTTATCCTTACCACTGTTGCTGCTGCAATAGGCTTCTTCACGCTTCTT-AG 68
||||||| |||| |||||||||||||||| |||||||||||||||||||| ||| || ||
Sbjct 5 CTTCTTCGTTTT-TCCTTACCACTGTTGCAGCTGCAATAGGCTTCTTCACCCTT-TTGAG 62
Query 69 AAATCTCAGATGCCATCAAGAAGATGACAAAGAAAATAA-T--TCTTCTTCT-TCTACTT 124
||| ||||||| ||||| | ||| |||||||||| || | |||||| | ||| |||
Sbjct 63 AAAACTCAGATTCCATC---ATGATAACAAAGAAAAGAAGTCAACTTCTT-TATCTCCTT 118
Query 125 CATCACCTCCGTCTTCTTCATCGT-CTT--T--GTCTCCTCCATCGTCTTTGGATCGCAT 179
||||| |||| ||||||| || | ||| | || ||||||| | |||| | | ||||
Sbjct 119 CATCATCTCCATCTTCTTTGTC-TCCTTCATCAGT-TCCTCCACCTTCTTCGTCTTGCAT 176
Query 180 CTGGACACACCATGTGTTTCCAAGTTTTC-GAGGGGAAGATGTCCGTAGAGACTTTCTTA 238
|||||||||||| || ||||| || ||| | |||||||||||||||||||||||||| |
Sbjct 177 CTGGACACACCAAGTCTTTCCCAG-CTTCAGCGGGGAAGATGTCCGTAGAGACTTTCTCA 235
Query 239 GTCACATTCAGATGGAGTTTCAAAGAATGGGAATCACACCATTCATTGATAATGAGATCG 298
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 236 GTCACATTCAGATGGAGTTTCAAAGAATGGGAATCACTCCATTCGTTGATAATGAGATTA 295
Query 299 AGAGAGGACAATCCATCGGTCCTGAACT-CATTCGAGCAATTAGAGAATCCAAGATCGCA 357
| |||||| |||||||||||||||| || | | || || ||||||| || ||||| |||
Sbjct 296 AAAGAGGAGAATCCATCGGTCCTGAGCTTC-TGCGGGCTATTAGAGGGTCTAAGATAGCA 354
Query 358 ATTATCTTGCTGTCAAGAAACTACGCTTCTTCGAGCTGGTGTCTTGACGAATTGGCGGAG 417
||||||||||| || || ||||| |||||||| | ||||||||||||||| ||| ||||
Sbjct 355 ATTATCTTGCTCTCTAGGAACTATGCTTCTTCAAAATGGTGTCTTGACGAACTGGTGGAG 414
Query 418 ATTATGAAGTGCAGGGAAGAAT-TGGGTCAAACAGTTTTGGCTGT-TTTCTATAAAGTGG 475
|||||||| ||||| ||||| | ||| |||||| || |||| | ||| || |||||||
Sbjct 415 ATTATGAAATGCAGAGAAGAGTATGG-TCAAACTGTGATGGCCATATTT-TACAAAGTGG 472
Query 476 ATCCATCTGATGTAAAGAAGCTGACCGGAGATTTTGGAAAAGTCTTCaaaaaaaCATGTG 535
|||| ||||||||||| || |||||||||||||| || |||||||| | |||||| ||||
Sbjct 473 ATCCTTCTGATGTAAAAAATCTGACCGGAGATTTCGGGAAAGTCTTTAGAAAAACTTGTG 532
Query 536 CCGGTAAAACAAAAGA-GCACGTTGGGAGATGGAGACAAGCTTTGGCAAATGTCGCCACA 594
|||||||| |||| || | || ||||||||||||||||||||| || ||| || ||||||
Sbjct 533 CCGGTAAACCAAA-GAAGGACATTGGGAGATGGAGACAAGCTTGGGAAAAAGTGGCCACA 591
Query 595 ATCGCCGGTTACCATTCGACCAACTGGGATAATGAAGCTACCATGATTA-GAAATATCGC 653
| || ||||||||||| | |||||||||||||||||| ||||||| | |||| |||||
Sbjct 592 GTAGCTGGTTACCATTCAATCAACTGGGATAATGAAGCGGCCATGATCAAGAAA-ATCGC 650
Query 654 TACTGATATATCCAACA-AGTTGAATAATTCTGCCTCAT-CAAGTGATTTTGATGGGTTG 711
|||||||| || |||| | |||| |||||| | || | || ||||||| || |||||
Sbjct 651 CACTGATATTTCGAACATA-TTGATTAATTCCAC-TCCTTCACGTGATTTCGACGGGTTA 708
Query 712 GTTGGGATGACTGCTCATTT-GAAGAAGATGGAACCATTGTTATGCCTAGGCTCAGATGA 770
|||||||||| |||||||| ||| |||||| |||| ||||||||||||| | |||| ||
Sbjct 709 GTTGGGATGAGAGCTCATTTAGAA-AAGATGAAACCGTTGTTATGCCTAGACACAGACGA 767
Query 771 AGTGAGGATGATTGGGATTTGGGGTCCTTCTGGGATTGGGAAGACGACCATCGCCAGAGT 830
||| ||||| |||||||||||||||||| |||||||||||||||| || || ||||||||
Sbjct 768 AGTAAGGATAATTGGGATTTGGGGTCCTCCTGGGATTGGGAAGACCACAATTGCCAGAGT 827
Query 831 TGTATACAACAAACTCTCT-AGCAGTTTTCAACTGAGTGTCTTTATGGA-ATCTATCGAA 888
|||||||||| ||||||| | |||||| |||||||||||||||||||| | |||| ||
Sbjct 828 TGTATACAACCAACTCTCCCA-CAGTTTCCAACTGAGTGTCTTTATGGAGAA-TATCAAA 885
Query 889 TCAAAATATACAAGACCA--TGT-TCCGATGACTATTGTGCCAAGTTGCAGTTACAACAG 945
|||| ||||| |||||| || ||||||||||| |||| |||||||| ||||||||
Sbjct 886 GCAAACTATACCAGACCAACTGGCTCCGATGACTACAGTGCAAAGTTGCAATTACAACAA 945
Query 946 CA-GTTTATGTCTCAAATAACCAACCAGAATGATAT-GAAGATTTCTCATTTAGGTGTTG 1003
| ||||||||||||||||||||| || || ||||| || |||| |||||||||| ||||
Sbjct 946 -ATGTTTATGTCTCAAATAACCAAGCAAAAGGATATAGA-GATTCCTCATTTAGGAGTTG 1003
Query 1004 TTCAAGATAGGCTAAAAGACAAGAAAGTTCTTGTTGTTCTTGATGGTGTGGACAAGTCAA 1063
||||||||| | ||||||||||||||||| || ||||||||||| ||| || |||||
Sbjct 1004 CCCAAGATAGGTTGAAAGACAAGAAAGTTCTGGTCGTTCTTGATGGGGTGAACCAGTCAG 1063
Query 1064 TGCAACTAGATGCCATGGCAAAAGAAACTTGGTGGTTTGGTCCTGGGAGTCGGATTATCA 1123
| ||||||||||| ||||| |||||| ||||||||||||||||||||||||| || ||||
Sbjct 1064 TACAACTAGATGCGATGGCGAAAGAAGCTTGGTGGTTTGGTCCTGGGAGTCGAATCATCA 1123
Query 1124 TCACAACACAAAATC-GAAAGATTTTTAGGGAACATGGGATTAACCATATTTACAAGGTG 1182
| ||||||||| ||| |||| ||||||| | ||||||||||||||||||||||||||||
Sbjct 1124 TTACAACACAAGATCAGAAAC-TTTTTAGAGCACATGGGATTAACCATATTTACAAGGTG 1182
Query 1183 AATTTTCCATCAACTGATGAGGCCCTTCAAATCTTGTGCACATATGCTTTTGGTCAAAAC 1242
|||||||| ||||||| ||||| ||||||||||| |||| |||||||||||||||||
Sbjct 1183 GATTTTCCACCAACTGAAGAGGCTCTTCAAATCTTCTGCATGTATGCTTTTGGTCAAAAT 1242
Query 1243 TCCCCTAAACATGGTTTTGAAGAAC-TGGCTCGGGAAGTTACACAA-CTTGCTGGTGAAC 1300
||||||||| |||||||| | |||| | ||| || |||| | | || ||||| ||| |||
Sbjct 1243 TCCCCTAAAGATGGTTTTCA-GAACCTTGCTTGGAAAGTAATA-AATCTTGCCGGT-AAC 1299
Query 1301 TTCC-TTTGTGTCTTAGGGTTATAGGCTCTTATTTTCGAGGAATGTCTA-AGCTGGAGTG 1358
||| |||| | || || |||| ||||| |||||| | |||||||| | || | ||||
Sbjct 1300 CTCCCTTTGGGGCTAAGAATTATGGGCTCCTATTTTAGGGGAATGTCGAGAGAAG-AGTG 1358
Query 1359 GACGAAAG-CACTACCAAGGTTA-AGGAGTAGCCTTGACGCTGATATTCTTAGCATTTTG 1416
|| |||| || ||||||| ||| || |||||||||||||||||||||| |||||||||
Sbjct 1359 GAA-AAAGTCATTACCAAGATTAGAG-AGTAGCCTTGACGCTGATATTCAAAGCATTTTG 1416
Query 1417 AAGTTCAGCTATGATGCCTTAGATGACGAAGACAAATATTTGTTTCTTCATATAGCTTGC 1476
|||||||||||||| || |||||||||||||| ||| |||| |||||||||||||| ||
Sbjct 1417 AAGTTCAGCTATGACGCTTTAGATGACGAAGATAAAAATTTATTTCTTCATATAGCATGT 1476
Query 1477 TTCTTCAATCG-TGAATG-GATTGTGAAAGTGGAAGAGTATCTTGCAGAGACGTTCT-TG 1533
|| ||||| || | || | |||| || | |||||||| |||||||| ||| ||| | ||
Sbjct 1477 TTTTTCAA-CGGTAAA-GAGATTAAGATATTGGAAGAGCATCTTGCAAAGAAGTT-TGTG 1533
Query 1534 GATGTGAGTCATCGGCTTAATGGCTTAGCTGAAAAATCGCTCATATCTTT--G-AATAGG 1590
|| || || || | ||||| | ||||||||| ||||| ||||||||||| | ||| ||
Sbjct 1534 GAAGTCAGGCAAAGACTTAACGTCTTAGCTGAGAAATCTCTCATATCTTTTAGCAATTGG 1593
Query 1591 GGATA-TATAAACATGCATGATTTGCTAGTCAAA-CTAGGTAGAGATATTGTCCGTAAAC 1648
||| | |||| | |||||| | |||||| |||| |||||| |||| ||||| ||||| |
Sbjct 1594 GGA-ACTATAGAGATGCATAAACTGCTAG-CAAAACTAGGTGGAGAAATTGTTCGTAACC 1651
Query 1649 AGTCTATTCGTGAGCCTGGACAACGACTA-TTTTTGGTTGATGCACGA-GAAATTTGTGA 1706
| ||||| | ||||||||||||||| | | |||||| |||||| | || || || |||||
Sbjct 1652 AATCTATCCATGAGCCTGGACAACGCC-AGTTTTTGTTTGATGGA-GAAGAGATATGTGA 1709
Query 1707 TGTACTCAACCTTGATGC-GAACGGTAGTAGAAGTGTTATGGGCATAAATTTCAACTTTG 1765
||| || || |||||| | | ||||||| |||||| || |||||| ||||| |||
Sbjct 1710 TGTGCTGAATGGTGATGCAGCA-GGTAGTAAAAGTGTAATAGGCATAGATTTCCACT--- 1765
Query 1766 GTGAGTATAGGATCAAGGAA-AAGTTAC-ATAT-AAGTGAGAGAGCCTTTCAAGGAATGT 1822
| ||| ||| ||||| || || | |||| || |||||||| ||| |||||||||
Sbjct 1766 ---AC-ATA--ATCGAGGAAGAA-TT-CGATATGAA-TGAGAGAGTTTTTGAAGGAATGT 1816
Query 1823 CTAATCTCCAATTCTTAAGATTCGAAGG-GA--AT-A-ACAATACAATACATCTACCGCA 1877
||||||| || |||||||||||||| | || || | ||| | |||| ||| ||||
Sbjct 1817 CTAATCTTCAGTTCTTAAGATTCGATTGTGACCATGATACATTGCAATT-ATC--CCGC- 1872
Query 1878 CGGTTTAGAG-TATATATCTCGTAAACTTC-GATTACTACACTGGACT-TATTTTCCGAT 1934
||| | ||| ||| | ||||||||||||| | |||||| | |||| | |||||||||||
Sbjct 1873 -GGTCT-GAGCTATCTTTCTCGTAAACTTCAG-TTACTAGATTGGA-TATATTTTCCGAT 1928
Query 1935 GACATGTTTGCCTCCTATTTTCAACACGGAGTTCCTGGTTGAACTACACATGA-GTTACA 1993
||||||||||||| ||| | | ||| ||||||||| |||||||| || ||| | |||
Sbjct 1929 GACATGTTTGCCTTCTACTGTGAACGTGGAGTTCCTTATTGAACTAAACCTGACGC-ACA 1987
Query 1994 GCAAACTTGAGAAGTTGTGGGAAGGAATTAAACCGCTTCCA-AATCTCAAGCGGATGGAT 2052
|||| ||||| | ||||||||||||| |||||||||||| | ||||||| || |||||||
Sbjct 1988 GCAAGCTTGATATGTTGTGGGAAGGAGTTAAACCGCTTC-ATAATCTCAGGCAGATGGAT 2046
Query 2053 TTGAGTTCGTCTCTCCTCTTAAAGGAGCTTCCTGACCTCTCAACTGCCACCAATCTTCAG 2112
||||||| ||| | ||| |||||||||||||| ||||||||||||| ||||| | |
Sbjct 2047 TTGAGTTATTCTGTAAACTTGAAGGAGCTTCCTGATCTCTCAACTGCCATTAATCTCC-G 2105
Query 2113 GAA-TTGAATCTCAGTGGTGGCTCCAGCCTGGTGAAGCTCCCCTCCACTATTGGGTATAC 2171
|| |||| ||| | | ||||||| ||| | || ||||| || ||||||| || |
Sbjct 2106 AAAGTTGATTCTTTCTAATTGCTCCAGTCTGATCAAACTCCCTTCTTGTATTGGGAATGC 2165
Query 2172 CAAAAATCTTCG-GACATTGA-ATCTTCGTT-ATTGCTCAAGTCT-GATGAATCT-CCCT 2226
|| ||||| || | ||| | ||||| | || |||||||||| | || | || ||||
Sbjct 2166 CATCAATCT-CGAGG-ATTTAGATCTTAATGGAT-GCTCAAGTCTTG-TGGAGCTTCCCT 2221
Query 2227 TCCTCTATTGGGAATGCCACTAATCT-CGAGTTATTAGAT-CTTAGC-AGTTTATCAAGT 2283
| | | ||||| |||||| ||| || | | ||| | | ||| || | || |||| |
Sbjct 2222 -C-T-T-TTGGGGATGCCATTAACCTTCAAAA-ATT-GCTTCTTCGCTA-TTGCTCAAAT 2274
Query 2284 CTGGTGGAGCTCCCTTCCTCTATTGGGAAT-CTCATCAATCTAAAAGAATTGCATCTT-A 2341
|||||||||||||| || |||||||||||| | ||| ||||| |||||| ||||| |
Sbjct 2275 CTGGTGGAGCTCCCCTCTTCTATTGGGAATGC-CATTAATCTTCGGGAATTGGATCTTTA 2333
Query 2342 GCAGTTTATCAAGTCTGGTG-GAGCT-CCCTTCCTCTATTGGGAAT-CTCATCAATCTAA 2398
| || || |||||| | || || |||| |||||||||||||| | ||| |||||
Sbjct 2334 TTA-TTGCTCGAGTCTGATCAGA-CTTCCCT-CCTCTATTGGGAATGC-CATTAATCTTT 2389
Query 2399 AAGAATT--GCATCTTAGCAGTTTATCAAGTCTGGTGGAGCTCCCTTCCTCTATTGGGAA 2456
|| || | |||||| | | | |||| ||| |||||||||| ||||| ||||||||
Sbjct 2390 T-GATTTTAG-ATCTTAACGGATGCTCAAATCTATTGGAGCTCCCATCCTCCATTGGGAA 2447
Query 2457 T-CTCATCAATCTA-AAAGAATTGCATCTTAGCAGTTTATCAA-GTCTGGTGGAGCTCCC 2513
| | ||| ||||| ||| || || ||||| |||| | ||| | || | ||||||||
Sbjct 2448 TGC-CATTAATCTCCAAA-AACTGGATCTTCGCAGATGCGCAAAG-CTATTAGAGCTCCC 2504
Query 2514 TTCCTCTATTGGGAAT-CTCATCAATCTAAAAGAAT-TGCATCTT-AGCAGTTTA-TCAA 2569
|| |||||||||||| | ||| ||||| || || ||| |||| | | | || ||||
Sbjct 2505 GTCTTCTATTGGGAATGC-CATTAATCTCCAA-AACCTGCTTCTTGA-C-GATTGCTCAA 2560
Query 2570 GTCTGGTGGAGCTCCCTTCCTCTATTGGGAAT 2601
||||| |||||||||| || ||||||||||||
Sbjct 2561 GTCTGTTGGAGCTCCCCTCGTCTATTGGGAAT 2592
> AT3G04220.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:1109118-1112188 REVERSE LENGTH=2604
Length=2604
Score = 952 bits (515), Expect = 0.0
Identities = 1318/1696 (78%), Gaps = 94/1696 (6%)
Strand=Plus/Plus
Query 191 ATGTGTTTCCAAGTTTTCGAGGGGAAGATGTCCGTAGAGACTTTCTTAGTCACATTCAGA 250
|||| |||||||| || || |||||||||||||| | |||||| || |||||||||||||
Sbjct 191 ATGTCTTTCCAAGCTTCCGCGGGGAAGATGTCCGCAAAGACTTCCTCAGTCACATTCAGA 250
Query 251 TGGAGTTTCAAAGA-ATGGGAATCACACCATTCATTGATAATGAGATCGAGAGAGGACAA 309
||||||||||||| | |||||||||||||| ||||||| | ||| |||||||| ||
Sbjct 251 AGGAGTTTCAAAGACA-AGGAATCACACCATTTGTTGATAACAATATCAAGAGAGGAGAA 309
Query 310 TCCATCGGTCCTGAACTCATTCGAGCAATTAGAGAATCCAAGATCGCAATTATCTTGCTG 369
|| |||||||| ||||||||||| || ||||||| |||||||||||||| ||||||||
Sbjct 310 TCTATCGGTCCAGAACTCATTCGGGCGATTAGAGGGTCCAAGATCGCAATCATCTTGCTC 369
Query 370 T-CAAGAAACTACGCTTCTTCGAGCTGGTGTCTT-GACGAATTGGCGGAGATTATGAAGT 427
| |||| |||||||||||||| |||||||| ||| |||||||||| |||||| || ||||
Sbjct 370 TCCAAG-AACTACGCTTCTTCAAGCTGGTG-CTTAGACGAATTGGTGGAGATCATAAAGT 427
Query 428 GCAGGGAAGAATTGGGTCAAACAGT-TTTGGCTGTTTTCTATAAAGTGGATCCATCTGAT 486
||| ||||||| ||||||||||||| | | | ||||||| ||||||||||||||| |
Sbjct 428 GCAAGGAAGAAATGGGTCAAACAGTGATAGTC-ATTTTCTACAAAGTGGATCCATCTCTT 486
Query 487 GTAAAGAAGCTGACCGGAGATTTTGGAAAAGTCTTCaaaaaaaCATGTGCCGGTAAAACA 546
||||||||||||||||| ||||| || || || |||| ||| || ||| ||| ||| |
Sbjct 487 GTAAAGAAGCTGACCGGTGATTTCGGGAAGGTATTCAGAAACACTTGTAAGGGT-AAAGA 545
Query 547 AA-AGAGCACGTTGGGAGATGGAGACAAGCTTTGGCAAATGTCGCCACAATCGCCGGTTA 605
|| ||| || ||| ||||||||| ||||||| ||| || || ||||| || |||||
Sbjct 546 AAGAGAAAACATTGAAAGATGGAGAGAAGCTTTCAAAAAAGTAGCAACAATAGCTGGTTA 605
Query 606 CCATTCGACCAACTGGGATAATGAAGCTACCATGATTAG-AAATATCGCT-ACTGATATA 663
| |||| | || |||||||| ||| | ||||| | | ||| || | | | ||||||
Sbjct 606 CGATTCAAGAAAATGGGATAACGAATCGGGCATGA-TCGAAAAAATAG-TCAGTGATATT 663
Query 664 TC-CAACAAGTTGAATAATTCTG-C-CTCATCAAGTGATTTTGATGGGTTGGTTGGGATG 720
|| || | | ||||| |||| | | | | ||| |||||||||| | ||| ||||||||
Sbjct 664 TCGGAA-ATGCTGAATCATTC-GACGC-CGTCACGTGATTTTGACGATTTGATTGGGATG 720
Query 721 ACTGCTCA-TTTGAAGAAGATGGAACCATTGTTATG-CCTAGGCTCAGATGAAGTGAGGA 778
| ||| | ||| |||||| ||||||||||| | | ||| |||||||||| ||| ||
Sbjct 721 GGAGATCACATGGAA-AAGATGAAACCATTGTTA-GACATAGACTCAGATGAAATGAAGA 778
Query 779 TGATTGGGATTTGGGGTCCTTCTGGGATTGGGAAGACGACCATCGCCAGAGT-TGTATAC 837
||| || || ||||||||| ||||| |||| || || ||||| || ||| | | ||||
Sbjct 779 CGATAGGAATATGGGGTCCTCCTGGGGTTGGCAAAACCACCATTGCTAGA-TCTTTATAT 837
Query 838 AA-CAAACTCTCTAG-CAGTTTTCAACTGAGTGTCTTTATGGA-ATCTATCGAATCAAAA 894
|| | ||| ||| | || ||||||||||||||||||||||| | |||| || |
Sbjct 838 AATC-AACACTC-GGACAAATTTCAACTGAGTGTCTTTATGGAGA-GTATCAAAACCGCG 894
Query 895 TATACAAGACCA---TGTTCCGATGACTATTGTGCCAAGTTGCAGTTACAACAGCAGTTT 951
|| |||| |||| |||||||||||||| | || |||||||| ||||||| | ||||
Sbjct 895 TACACAATACCAGCGTGTTCCGATGACTACTATGAAAAGTTGCAACTACAACAACGGTTT 954
Query 952 ATGTCTCAAATAACCAACCA-GAATGATATGAAGATTTCTCATTTAGGTGTTGTTCAAGA 1010
||||||||||||||||||| ||| || | |||| | |||||||| |||| |||||
Sbjct 955 CTGTCTCAAATAACCAACCAGGAA-AATGTCCAGATCCCACATTTAGGAGTTGCACAAGA 1013
Query 1011 TAGGCTAAAAGACAAGAAAGTTCTTGTTGTTCTTGATGGTGTGGA-CAAGTCAATGCAAC 1069
||| | || ||||||||||||||||||||| |||||| |||| | | ||||| | |||
Sbjct 1014 AAGGTTGAACGACAAGAAAGTTCTTGTTGTTATTGATGATGTGAATC-AGTCAGTACAAG 1072
Query 1070 TAGATGCCATGGCAAAAGAAACTTG-GTGGTTTGGTCCTGGGAGTCGGATTATCATCACA 1128
|||||||| |||| ||||||| || ||| | |||||||||||||||||||||||||||
Sbjct 1073 TAGATGCCTTGGCGAAAGAAA-ATGATTGGCTAGGTCCTGGGAGTCGGATTATCATCACA 1131
Query 1129 ACACAAAATCGAAAGATTTTT-AGGGAACATGGGATT-AACCATATTTACAAGGTGAATT 1186
|| ||| | ||| || |||| |||| |||||||| ||| |||||||| ||||| |||
Sbjct 1132 ACCCAAGACCGAG-GAATTTTGAGGGCGCATGGGATCGAAC-ATATTTACGAGGTGGATT 1189
Query 1187 TTCCATCAACT--GATGAGGCCCTTCAAATCTTGTGCACATATGCTTTTGGTCAAAACTC 1244
||| ||||| || ||||||||||||||||| |||| |||||||||||||||| ||
Sbjct 1190 ATCC--CAACTATGAAGAGGCCCTTCAAATCTTTTGCATGCATGCTTTTGGTCAAAAGTC 1247
Query 1245 CCC-TAAACATGGTTTTGAAGAACTGGCTCGGGAAGTTACA-CAACTTGCTGGT-GAACT 1301
||| || |||||||||| || || |||| |||||||| || ||| | ||| || ||
Sbjct 1248 CCCATATG-ATGGTTTTGAGGAGCTTGCTCAACAAGTTACAACA-CTTTCGGGTAGA-CT 1304
Query 1302 TCCTTTGTGTCTTAGGGTTATAGGCTCTTATTTTCGAGGAATGTCTAAGCTGGAGTGGAC 1361
||||||| | |||| |||||| || || ||||| || |||||| | |||| |||||||||
Sbjct 1305 TCCTTTGGGACTTAAGGTTATGGGATCCTATTTCCGGGGAATGACCAAGCAGGAGTGGAC 1364
Query 1362 GAAAG-CACTACCAAGGTTAAGGAGT-AGCCTTGACGCTGATATTCTTAGCATTTTGAAG 1419
|| | ||||||||||| |||||| | | |||||||| | ||| |||||| | ||
Sbjct 1365 -AATGGCACTACCAAGGGTAAGGACTCA-CCTTGACGGAAAAATTGAGAGCATTCTAAAA 1422
Query 1420 TTCAGCTATGATGCCTTA-GATGACGAAGACAAATA-TTTGTTTCTTCATATAGCTTGCT 1477
|||| || ||||||||| | ||| | ||| ||| | |||||| |||||| |||||||||
Sbjct 1423 CTCAGTTACGATGCCTTATG-TGATGTAGATAAA-AGTTTGTTCCTTCATCTAGCTTGCT 1480
Query 1478 TCTT-CAATCG-TGAATGGATTGTGAA--AGTGGAAGAGTATCTTGCAGAGACGTTCTTG 1533
||| | | | ||| || || || ||| ||| || | |||| | ||| ||||| |
Sbjct 1481 -CTTTCCA-CAATGA-TG-ATACCGAGTTAGTAGAACAGCAGCTTGGAAAGAAGTTCTCG 1536
Query 1534 GATGTGAGTCATCGGCTTAATGGCTTAGCTGAAAAATCGCTCATATCTT-TGAATAGGGG 1592
||| |||| || ||||| | | ||||||||| |||||||| ||| | | || || |
Sbjct 1537 GATTTGAGGCAAGGGCTTCACGTCTTAGCTGAGAAATCGCTTATA-CATATGGATTTAAG 1595
Query 1593 A-TATATAAACATGCATGATT-TGCTAGTCA-AACTAGGTAGAGATATTGTCCGTAAACA 1649
| | ||| ||||||| || |||| | || |||| |||||||| ||||| ||||||||
Sbjct 1596 ACTG-ATACGTATGCATG-TTCTGCTGG-CACAACTTGGTAGAGAAATTGTTCGTAAACA 1652
Query 1650 GTCTATTCGTGAGCCTGGACAACGACTATTTTTGGTTGATGCA-CGAGAAATTTGTGATG 1708
|| |||| ||||||||||||||| | |||||||||||||||| | ||| ||| |||| |
Sbjct 1653 ATCCATTCATGAGCCTGGACAACGTCAATTTTTGGTTGATGCAAC-AGATATTCGTGAAG 1711
Query 1709 TACTCAACCTTGATGCGA-ACGGTAGTAGAAGTGTTATGGGCATAAATTTCAACTTTGGT 1767
|||||| | | |||| | | || ||||||||||| || |||||| ||||| |||| |
Sbjct 1712 TACTCA-C-T-GATGATACA-GGCAGTAGAAGTGTAATAGGCATAGATTTCGACTTCAAT 1767
Query 1768 GA-GTATAGGATCAAGGAAAAGTTACATATAAGTGAGAGAGCCTTTCAAGGAATGTCTAA 1826
| | || ||| ||| || ||| |||||||||||| |||||| | ||||||||||||
Sbjct 1768 -ACG-AT-GGAGAAAG-AA---TTAGATATAAGTGAGAAAGCCTTCCGAGGAATGTCTAA 1820
Query 1827 TCTCCAATTCTTAAGA 1842
||| || ||| |||||
Sbjct 1821 TCTTCAGTTCATAAGA 1836
> AT5G38340.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr5:15320507-15324061 FORWARD LENGTH=3180
Length=3180
Score = 763 bits (413), Expect = 0.0
Identities = 1591/2138 (74%), Gaps = 167/2138 (8%)
Strand=Plus/Plus
Query 191 ATGTGTTTCCAAGTTTTCGA-GGGGAAGATGTCCGTAGAGA-CTTTCTTAGTCACATTC- 247
|||| ||||| || |||| | || | |||||| || | | | ||||||| |||||| |
Sbjct 173 ATGTCTTTCCGAG-TTTCCACGGAGCAGATGTTCGCA-AAACCTTTCTTTCTCACATGCT 230
Query 248 AGATGGAGTTTCAAA-GAATGGGAATCACACCATTCATTGATAATGAGATCGAGAGAGGA 306
| | ||| |||||| ||| ||||||| ||||||||||||||||| ||| || ||||
Sbjct 231 A-AAAGAG-TTCAAACGAAAGGGAATCGTTCCATTCATTGATAATGATATC--GACAGGA 286
Query 307 -CAA-TCCATCGGTCCTGAACTCATTCG-AGCAATTAGAGAATCCAAGATCGCAATTATC 363
||| || || |||||||| ||| || ||| || |||| ||| ||||||||||| ||
Sbjct 287 GCAAGTCTATTGGTCCTGAGCTC-GACGAAGCTATCAGAGGATCAAAGATCGCAATCGTC 345
Query 364 TTGCTGTC-AAGAAACTACGCTTCTTCGAGC-TGGTGTCTTGACGAATTGGCGGAGATTA 421
|||| || ||| ||||| |||||||| | | ||||| || |||| |||| |||||| |
Sbjct 346 ATGCTCTCAAAG-AACTATGCTTCTTC-ATCATGGTGCCTAAACGAGTTGGTGGAGATCA 403
Query 422 TGAAGTGCAGGGAAGAATTGGGTCAAACAGTTTTGGCTGTTTTCTATAAAGTGGATCCAT 481
||| || || |||| ||| ||||||||| || | |||||||| || || |||
Sbjct 404 CGAAATGTAGAAAAGATTTGAATCAAACAGTGATGACCATTTTCTATGGCGTTGACCCAA 463
Query 482 CTGATGTAAAGAAGCTGACCGGAGATTTTGGAAAAGTCTTCaaaaaaaCATGTGCCGGTA 541
| ||||||||||||| ||| ||||| ||||| || |||||| ||| ||| |||| |||
Sbjct 464 CAGATGTAAAGAAGCAGACAGGAGAGTTTGGGAAGGTCTTCGAAAGAACTTGTGAAAGTA 523
Query 542 AAACAAAAGAGCACGTTGGGAGATGGAGACAAGCTTTGGCAAAT-GT-C-GCCACAATCG 598
||||| | ||||| ||| || ||||||| ||| ||||| || || | || |||||||
Sbjct 524 AAACAGAGGAGCAGGTTAAGACATGGAGAGAAGTTTTGG---ATGGTGCGGCAACAATCG 580
Query 599 CCGGTTACCATTCGAC-CAACTGGGATAATGAAGCTACCATGATTAG-AAATATCGCTAC 656
| || | |||| | | || ||||||||||||||| | ||||||| | ||| || | |
Sbjct 581 CTGGAGAGCATT-GGCACATCTGGGATAATGAAGCGAGCATGATT-GAAAAAATTTCCAT 638
Query 657 TGATATATCCAACAAGTTGAATAATTC-TGCCTCA---TCAAGTGATTTTGATGGGTTGG 712
||| | || ||| | || ||| || | ||||| ||||| |||||||| | |||
Sbjct 639 TGACGTTTCAAAC-A-TT-CTTAA-TCGTTCCTCACCCTCAAGAGATTTTGACGATTTGA 694
Query 713 TTGGGAT-GACTGCTCAT-TTGAAGAAGATGGAACCATTGTT-ATGCCTAGGCTC-AGAT 768
||||||| || |||||| | ||| || ||| || | ||||| | ||||| ||| | ||
Sbjct 695 TTGGGATGGA-AGCTCATATGGAA-AAAATGAAATCGTTGTTGA-GCCTACACTCTA-AT 750
Query 769 GAAGTGAGGATGATTGGGATTTGGGGTCCTTCTGGGATTGGGAAGACGACCATCGCCAGA 828
||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct 751 GAAGTGAAGATGATTGGGATTTGGGGTCCTTCTGGGATTGGGAAGACCACCATTGCAAGA 810
Query 829 GT-TGTATACAACAAACTCTCTAGCAG-TTTTCAACTGAGTGTCTTTATGG--AAT-CTA 883
|| | |||| ||| | ||| || | |||| | ||||||||||||||| ||| ||
Sbjct 811 GTCT-TATATAACCGTTTTTCTGGC-GATTTTGGATTGAGTGTCTTTATGGACAATATTA 868
Query 884 TCGAATCAAAATATACAAGACCA-T--GTTCCGATGACTATTGTGCCAAGTTGCAGTTAC 940
|| | | ||||||||||| | |||| || || || |||| |||||||| ||||
Sbjct 869 AAGAGTTGATGCATACAAGACCAGTGGGTTCTGACGATTACAGTGCAAAGTTGCACTTAC 928
Query 941 A-ACAGCAGTTTATGTCTC-AAATAACCAACCAGAATGATATGAAGATTTCTCATTTAGG 998
| | | ||||| ||||| | | ||||||||||| || || | |||||| ||||||||||
Sbjct 929 AGA-ACCAGTTAATGTC-CGAGATAACCAACCATAAGGAGACCAAGATTACTCATTTAGG 986
Query 999 TGTTGTTCAAGATAGGCTAAAAGACAAGAAAGTTCTTGTTGTTCTTGATGGTGTGGA-CA 1057
||||| | |||||| | || ||||| ||||| ||| |||| |||||| | | || ||
Sbjct 987 AGTTGTACCTGATAGGTTGAAGGACAATAAAGTGCTTATTGTCCTTGATAGCATTGATCA 1046
Query 1058 AGTCAATGCAACTAGATGCCATGGCAAAAGAAACTTGGTGGTTTGGTCCTGGGAGTCGGA 1117
| ||||| ||||||||||| || |||||||||||| ||||| ||||||||||||||||
Sbjct 1047 A-TCAATACAACTAGATGCTATCGCAAAAGAAACTCAATGGTTCGGTCCTGGGAGTCGGA 1105
Query 1118 TTATCATCACAACACAAAATCGAAAGATTTTTAG-GGAACATGGGATTAACCATATTTAC 1176
||||||||||||| ||| | | ||| | || | | || ||||| || ||| ||||||||
Sbjct 1106 TTATCATCACAACGCAAGACCAAAA-ACTTCTGGAGGCACATGACATCAACAATATTTAC 1164
Query 1177 AAGGTGAATTTTCCATCAAC-TGATGAGGCCCTTCAAATCTTGTGCACATATGCTTTTGG 1235
|||||| | |||||||||| | |||| || |||||||||| || || |||||||||||
Sbjct 1165 AAGGTGGAGTTTCCATCAAAAT-ATGAAGCTTTTCAAATCTTTTGTACGTATGCTTTTGG 1223
Query 1236 TCAAAACTCCCCTAAACATGGTTTTGAAGAA-CTGGCTCGGGAAGTTACACAACTTGCT- 1293
|||||| | ||||||| |||||||||| ||| || ||| ||||||||||| | ||| |
Sbjct 1224 TCAAAATTTCCCTAAAGATGGTTTTGA-GAAGCTTGCTTGGGAAGTTACAGACCTTT-TA 1281
Query 1294 GGTGAACTTCCTTTGTGTCTTAGGGTTATAGGCTCTTATTTTCGAGGAATGTCTAAGC-T 1352
|||||||| || ||| | || || ||||| ||||| | || ||| ||||||||||| |
Sbjct 1282 GGTGAACTACCATTGGGACTAAGAGTTATGGGCTCCCACTTCCGAAGAATGTCTAAGGAT 1341
Query 1353 GGAGTGGACGAAA--GCACTACCAAGGTTAAGGAGTAGCCTTGACGCTGATATTCTTAGC 1410
| | ||| | || ||| |||||||||||| || | ||||||| ||| |||||| |||
Sbjct 1342 G-ATTGG--GTAATTGCATTACCAAGGTTAAAGACTCGCCTTGATGCTAATATTCAAAGC 1398
Query 1411 ATTTTGAAGTTCAGCTATGATGCCTTAGATGAC-GAAGACAAATATTTGTTTCTTCATAT 1469
||||||||||| || || ||||| ||| | | ||||| ||| |||| || ||||||||
Sbjct 1399 ATTTTGAAGTTTAGTTACGATGCTTTATCTC-CTGAAGATAAAGATTTATTCCTTCATAT 1457
Query 1470 AGCTTGC-TTCTTCAATCG-TGAATGGATT-GTGAAAGTGGAAGAGTATCTTGCAG-AGA 1525
||| ||| || ||||| | |||| | | | |||||||| ||||| |||||||| |||
Sbjct 1458 AGCATGCCTT-TTCAA-CAATGAA-GAAATAGTGAAAGTCGAAGATTATCTTGCTTTAGA 1514
Query 1526 CGTTCTTGGATGTGAGTCATCGGCTTAATGGCTTAGCTGAAAAATCGCTCAT--ATCTTT 1583
|||||||||| ||| ||| ||||| | ||||||||| ||||| ||||| ||||
Sbjct 1515 T-TTCTTGGATGCGAGGCATGGGCTTCACCTCTTAGCTGAGAAATCTCTCATTGATCTC- 1572
Query 1584 GAATAGGGGATA--TATAAA---C-A----TGCATGATTTGCTAGT-CAAACTAGGTAGA 1632
||| || | || || ||| | | ||||| || | |||| ||| | |||| |
Sbjct 1573 GAA--GGTGTTAACTACAAAGTGCTAAAAATGCATAATCTACTAGAACAAT-TGGGTAAA 1629
Query 1633 GATATTGTCCGT-A--A------ACAGT-CT-ATTC-GTGAGCCTGGACAA-CGACTA-T 1678
|| ||||||||| | | ||| || | || ||||||||| | || || | | |
Sbjct 1630 GAAATTGTCCGTTATCATCCGGCACACCACTCAATCCGTGAGCCTGAA-AAGCGTC-AGT 1687
Query 1679 TTTTGGTTGATGC-ACGAGAAATTTGTGATGTACTCAACCTTGATGCGAACGG-TAGTAG 1736
||||||||||| | | ||| |||||||| |||||| || |||| | |||| |||||
Sbjct 1688 TTTTGGTTGATACTAA-AGATATTTGTGAAGTACTCG-CC--GATG-GCACGGGTAGTAA 1742
Query 1737 AAGTGTTATGGGCATAAATTTCAACTTTGGTGAGTATAGGATCAAGGAAAAGTTACATAT 1796
|||| ||| || ||| |||| |||| | | | || ||| ||| | ||| ||||
Sbjct 1743 AAGTATTAAAGGTATATGTTTCGACTTAGATAACC-TA---TCAGGGAGA--TTAAATAT 1796
Query 1797 AAGTGAGAGAGCCTTTCAAGGAATGTCTAATCTCCAATTCTTAAGA-TTC-GAAGGGAAT 1854
|||||||||||| ||| |||||||| |||| || ||||||||||| ||| || | ||
Sbjct 1797 AAGTGAGAGAGCTTTTGAAGGAATGACTAACCTTAAATTCTTAAGAGTTCTGA-GAGACC 1855
Query 1855 -AA-CAATACAATAC-ATCT-ACCGCACGGTTTAGAGTATATATCTC-GTAAACTTCGAT 1909
|| | | | | | | || |||||| |||||| | ||| || || | |||||| |||
Sbjct 1856 GAAGCGAGA-AGTTGTA-CTTACCGCAAGGTTTAAATTATCTACCTAAG-AAACTTAGAT 1912
Query 1910 TACTACACTGG-ACTTATTTTCCGATGACATGTTTGCCTCCTA--TTTTCAACA-CGGAG 1965
|| || | ||| ||| |||||||||||| | |||||||| | | |||| ||| || |
Sbjct 1913 TAATAGAATGGGACT-ATTTTCCGATGAAAAGTTTGCCTTCAAACTTTTGTACAACGTA- 1970
Query 1966 TTCCTGGTTGAAC-TACACATGAGTTACAGCAAACTTGAGAAGTTGTGGGAAGGAATTAA 2024
||| || ||| |||| ||| | | ||||||||||||||||| |||||||||| ||
Sbjct 1971 --CCTAGTC-AACCTACATATGCGGAAAAGCAAACTTGAGAAGTTATGGGAAGGAA--AA 2025
Query 2025 -A-CCGCTTCCAAATCTCAAGCGGATGGATTTGAGTT-CGTCTCTCCTCTTAAAGGAGCT 2081
| || ||| || || ||| ||||| |||| ||| | || | ||||||||||
Sbjct 2026 CAGCCACTTGGTAACCTGAAGTGGATGAATTTAAGTAAC-TCGAGAAACCTAAAGGAGCT 2084
Query 2082 TCCTGACCTCTCAACTGCCACCAATCTTCAGGAATTGAATCTCAGTGG-TGGCTCCAGCC 2140
||||| |||||||| || || || ||||| || |||||||||| | | || |||||||
Sbjct 2085 ACCTGATCTCTCAACAGCTACTAAACTTCAAGATTTGAATCTCACTAGATG-CTCCAGCT 2143
Query 2141 TGGTGAAGCTCCCCTCCACTATTGGGTATACCAAAAATCTTCG-GACATTGAATCTTCGT 2199
||||| || | || | | ||||||| | |||| |||||| | || | |||||||| ||
Sbjct 2144 TGGTGGAGATTCCTTTCTCTATTGGAAACACCACTAATCTT-GAGAAACTGAATCTT-GT 2201
Query 2200 TAT-TGCTCAAGTCT-GATGAATCT-CCCTTCCTCTAT 2234
|| ||| | || || | || | || |||| |||||||
Sbjct 2202 AATGTGCACTAG-CTTGGTGGAGCTGCCCT-CCTCTAT 2237
> AT3G25510.1 | Symbols: | disease resistance protein (TIR-NBS-LRR
class), putative | chr3:9260838-9268797 REVERSE LENGTH=5946
Length=5946
Score = 544 bits (294), Expect = 3e-153
Identities = 946/1246 (76%), Gaps = 104/1246 (8%)
Strand=Plus/Plus
Query 2225 CTT-CCTCTATTGGG-AATGCCACTAATCT-CGAGTTATTAGATCTTAGCAGTT-TATCA 2280
||| ||| || |||| |||||||| ||||| | | | || |||||| | | || | ||
Sbjct 2392 CTTCCCTTTA-TGGGAAATGCCACAAATCTCCAAAATCTT-GATCTTGGTAATTGT-TCT 2448
Query 2281 AGTCTGGTGGAGCTCCCTTCCTCTATTGGGAAT-CTCATCAATC-T-AAAAGAATTGCAT 2337
||| ||||||||||||| || ||||| || ||| | ||| |||| | |||| ||| ||
Sbjct 2449 AGTTTGGTGGAGCTCCCATCTTCTATAGGAAATGC-CATTAATCTTCAAAA-TCTTG-AT 2505
Query 2338 CTTAGCAGTT-TATCAAGTCTGGTGGAGCTCCCTTCCTCTATTGGGAAT-CTCATC-AAT 2394
||||| | || | |||||||||||| |||| ||||||| ||| || ||| | || | |||
Sbjct 2506 CTTAGTAATTGT-TCAAGTCTGGTGAAGCTTCCTTCCTTTATCGGAAATGC-CA-CTAAT 2562
Query 2395 CTAAAAGA-ATT-GCATCTTAGCAGTTTATCAAGTCTGGTGGAGCTCCCTTCCTCTATTG 2452
|| ||| || | | || | | | |||||||| |||||| ||||| | ||||||
Sbjct 2563 CT-CGAGATTTTAG-ACCTCCGTAAATGCTCAAGTCTAGTGGAGATCCCTACTTCTATT- 2619
Query 2453 GGA-ATCTCATC-AATCTAAAAGA-ATT-GCATCTTAGCAGTTTATCAAGTCTGGTGGAG 2508
||| || ||| | ||||| || ||| | |||||||| | | |||||| | |||||
Sbjct 2620 GGACATGTCA-CTAATCT-GTGGAGATTAG-ATCTTAGCGGATGCTCAAGTTTAGTGGAA 2676
Query 2509 C-TCCCTTCCTCTATTGGGAATC-TCA-TCAATCTAAAAGAATTGCATCT-TAGCAGTTT 2564
| |||| || ||| || |||| | ||| | || || ||| ||| |||| | | |
Sbjct 2677 CTTCCC-TCATCTGTT-GGAAACATCAGTGAA-CTCCAAGTGTTGAATCTCCA-TAACTG 2732
Query 2565 ATCAAGTCTGGTGGAGC-TCCCTTCCTCTATTGGGA-AT-CTCATC-AATCTAAAAGA-A 2619
|||| ||||||| ||| |||| || ||| || ||| || | || | ||||| || |
Sbjct 2733 CTCAAATCTGGTGAAGCTTCCC-TCTTCT-TTTGGACATGC-CA-CTAATCT-GTGGAGA 2787
Query 2620 TTGGATCTTAGCAGTTTATCATGTCTAGTGGAGC-TCCCT-TTCTGGATTGGAAATGCCA 2677
|| ||||||||| | | ||| || ||||||| | ||||| ||| |||||||| ||
Sbjct 2788 TTAGATCTTAGCGGATGCTCAAGTTTAGTGGAACTTCCCTCATCT--ATTGGAAACATCA 2845
Query 2678 CCAACCTTGAGGTTTTAAACC-TTGACCAA-TGCTCAAATCTGGTAAAGCTCCCCTTTTC 2735
| || || | | | |||| ||| ||| |||||||||||||| ||||| |||| |||
Sbjct 2846 CAAATCTCCAAGAGCTGAACCTTTG--CAACTGCTCAAATCTGGTGAAGCTTCCCTCTTC 2903
Query 2736 TATTGGAAACCTTCA-GAAGTTGCAAAAGTTGACCTTACG-AGGATGCTC-TAAGCTAGA 2792
||||||||||||||| | ||| | |||| || | | ||||| | ||| ||||
Sbjct 2904 TATTGGAAACCTTCATCTA-TTGTTCACTTTGA-GTTTGGCAAGATGC-CAAAAGTTAGA 2960
Query 2793 AGATCTTCC-AGCCAACATCAAATTGGGATCTCTTTG--CTTACTTGATCTCACTGATTG 2849
| |||||| || ||| ||||| ||| ||||| ||| | |||||||||||| |||||
Sbjct 2961 GGCTCTTCCGAG-CAATATCAACTTGAAATCTC-TTGAAC-GACTTGATCTCACCGATTG 3017
Query 2850 CTTGCTGTTGAAAAGGTTTCCTGAGATCTCCACAAACGTTGAATTTCTCTATCTCAAAGG 2909
|| || ||| ||||| ||||||||||| ||||||||| |||||| |||||||| | ||
Sbjct 3018 CTCGCAGTTTAAAAGTTTTCCTGAGATTTCCACAAACATTGAATGCCTCTATCTTGATGG 3077
Query 2910 AACCACAATAGAAGAAGTCCCTTCATCAATCAAATCTTGGTCTCGTCTCACTAAGTTGCA 2969
|||| || |||||||||| |||||||||||||| ||||||||| | |||||| ||||||
Sbjct 3078 AACCGCAGTAGAAGAAGTGCCTTCATCAATCAAGTCTTGGTCTAGACTCACTGTGTTGCA 3137
Query 2970 TATGTCATACAGT-GAAAATCTCAA-GAACTTTC-CTCATGCTT-TTGACATCATCACAG 3025
|||||||||| | ||||| ||||| ||| ||| | |||| || | |||||||| || |
Sbjct 3138 TATGTCATAC-TTCGAAAAACTCAAGGAA--TTCTCGCATG-TTCTAGACATCATAAC-G 3192
Query 3026 T-GCT-GCAAGTGACCAATACAGAAATACAAG-AGTTTCCCCCATGGGTC-AACAAATTC 3081
| ||| | || | | | | ||| ||||||| || || | |||||| || || ||| ||
Sbjct 3193 TGGCTAG-AA-T-TCGGAGA-AGATATACAAGAAG-TTGCTCCATGGATCAAAGAAA-TC 3246
Query 3082 TCTCGTTTAACA-GTACTCATACTCAAGGGATGCAAAAAGCTGGTATCACTCCAACAGAT 3140
|||||| | ||| | ||| | |||| | ||||| |||||| ||||||||| |||| |
Sbjct 3247 TCTCGTCT-ACATGGACTTAGACTCTACAAATGCAGAAAGCTTTTATCACTCCCACAGCT 3305
Query 3141 TCCAGATTCCCTCTCTTA-CATAGATGCAGAAGATTGTGAGTCCCTGGAGAGACTAGATT 3199
|||||| || ||||| || |||| |||| |||| |||||||||| |||||| ||||||||
Sbjct 3306 TCCAGAATCTCTCTC-TATCATAAATGCTGAAGGTTGTGAGTCCTTGGAGACACTAGATT 3364
Query 3200 GCTCCTTTC-AGGATCCAAATATTTGGC-TC-AAATTTT-CTAAGTGCTTCAAACTGAAT 3255
||| ||| | | |||| | | | | || |||||| ||||||||||||||||||||
Sbjct 3365 GCT-CTTACAACAATCC--CT-TGAGTCTTCTTAATTTTGCTAAGTGCTTCAAACTGAAT 3420
Query 3256 CAAGAAGCCAGAGACCTCATTATCCAGACACCGACTAGTAAAT-ATGCGGTCTTACCCGG 3314
|||||||| |||||| |||| ||||||| |||||| ||||| | ||||||||||||||||
Sbjct 3421 CAAGAAGCGAGAGACTTCATCATCCAGATACCGACCAGTAA-TGATGCGGTCTTACCCGG 3479
Query 3315 CAG-AGAAGTGCCTGCATACTTCACTCACCAATCTACTACTGGAGGTTCCTTGACAATCA 3373
| |||||||||||||||||||||||||| | |||||||||||| ||||||||| ||||
Sbjct 3480 T-GCAGAAGTGCCTGCATACTTCACTCACCGAGCTACTACTGGAGCTTCCTTGACCATCA 3538
Query 3374 AGCTGAACGAGAAGCCTCTTCCTACATCCATGAGGTTTAAGGCTTG 3419
|| | || |||| |||| || ||||||||||||| |||||||||||
Sbjct 3539 AGTTAAATGAGAGGCCTATTTCTACATCCATGAGATTTAAGGCTTG 3584
> AT3G03855.1 | Symbols: | pseudogene of disease resistance protein
| chr3:986948-990738 FORWARD LENGTH=3791
Length=3791
Score = 518 bits (280), Expect = 2e-145
Identities = 688/881 (78%), Gaps = 44/881 (5%)
Strand=Plus/Plus
Query 725 CTCATTTGAAGAAGATGGAACCATTGTTATGCCTAG-GCTCAGATGAAGTGAGGATGATT 783
||||| || |||||||| |||| ||| ||||||||| | ||||| ||||||||||||||
Sbjct 816 CTCATATGGAGAAGATGAAACCGTTGCTATGCCTAGAG-TCAGAGGAAGTGAGGATGATA 874
Query 784 GGGATTTGGGGTCCTTCTGGGATTGGGAAGACGACCATCGCCAGAGTTGTATACAACAAA 843
||||| ||||||||| |||| ||||| ||||| ||||| |||||| || | | |||| ||
Sbjct 875 GGGATCTGGGGTCCTCCTGGAATTGGCAAGACCACCATTGCCAGATTTCTTTTCAACCAA 934
Query 844 CTCTCTAGCAGTTTTCAACTGAGTGTCTTTATGGAAT-CTATCGAATCAAAATATACAAG 902
|| | | ||| |||| ||| ||||||||||| || |||| || ||| |||||||
Sbjct 935 CTATTTGGCAATTTTGGTTTGATTGTCTTTATGG-ATAATATCAAAGCAATGTATACAAT 993
Query 903 ACC-A-T-GTTCCGATGACTATTGTGCCAAGTTGCAGTTACAACAGCAGTTTATGTCTCA 959
||| | | | || ||||||||| |||| |||||| | || || ||| |||| ||||||||
Sbjct 994 ACCAATTGGCTCAGATGACTATAGTGCAAAGTTGGATTTGCAGCAGAAGTTCATGTCTCA 1053
Query 960 AATAACCAACCAGAATGATATGAAGATTTCTCATTTAGGTGTTGTTCAAGATAGGCTAAA 1019
||| | |||| | || ||||| |||||| |||||||||| |||| ||||| ||||| ||
Sbjct 1054 AATTATCAACGAAAAGGATATCAAGATTCCTCATTTAGGGGTTGCACAAGAAAGGCTCAA 1113
Query 1020 AGACAAGAAAGTTCTTGTTGTTCTTGATGGTGTGGA-CAAGTCAATGCAACTAGATGCCA 1078
||| ||||||||||||||||||||||||| || || | ||| | | ||| | || ||||
Sbjct 1114 GGACGAGAAAGTTCTTGTTGTTCTTGATGGCGTTGATC-AGTTATTTCAATTGGAAGCCA 1172
Query 1079 TGGCAAAAGAAACTTGGTGGTTTGGTCCTGGGAGTCGGATTATCATCACAACACAAAATC 1138
|||||||||||||| ||||||| |||| ||| ||||| |||||||| ||||||| | |||
Sbjct 1173 TGGCAAAAGAAACTCGGTGGTTCGGTCATGGAAGTCGTATTATCATTACAACACCAGATC 1232
Query 1139 GAAAGA-TTTTTAGGGAACATGGGATTAACCATATTTACAAGGTGAATTTTCCATCAACT 1197
||| | |||| | || ||||||||| | ||| ||||| |||||| |||||||| || ||
Sbjct 1233 TAAA-ACTTTTGAAGGCACATGGGATCACCCACATTTATAAGGTGGATTTTCCACCACCT 1291
Query 1198 GATGAGGCCCTTCAAATCTTGTGCACATATGCTTTTG-GTCAAAACTCCCCTAAACATGG 1256
| |||||| ||| ||||||| || | |||||||| | | ||||| ||||||||| | ||
Sbjct 1292 GCTGAGGCTCTTGAAATCTTTTGTATGTATGCTTTCGAG-CAAAAATCCCCTAAAGAGGG 1350
Query 1257 TTTTGAAGA-AC-TGGCTCGGGAAGTTACACA-ACTTGCTGGTGAACTTCCTTTGTGTCT 1313
||| | ||| | || || |||||| |||| | |||||| || |||| |||||| | ||
Sbjct 1351 TTTCG-AGATGCTTGCCT-GGGAAGCTACA-ATTCTTGCTTGTCAACTCCCTTTGGGACT 1407
Query 1314 TAGGGTTATAGGCTCTTATTTTCGAGGAATGT-CT--AAGCTGGA-GTGGACGAA-AG-C 1367
|||||||||||||||||||||||||||| || || ||| | | |||| ||| || |
Sbjct 1408 AAGGGTTATAGGCTCTTATTTTCGAGGAAAGTACTCGAAGAAG-ATGTGG--GAAGAGGC 1464
Query 1368 ACTACCA-AGGTTAAGGAGT-AGCCTTGACGCTGATATTCTTAGCATTTTGAAGTTCAGC 1425
||||||| || ||||||||| | |||||||| || ||| | | |||| ||||||| |
Sbjct 1465 ACTACCAGAG-TTAAGGAGTCA-CCTTGACGGAGAAATTGAAACCGTTTTAAAGTTCAAC 1522
Query 1426 TATGATGCCTTAGATGACGAA-GACAAATATTTGTTTCTTCATATAGCTTGCTTCTTCAA 1484
|| ||||||||| || ||| || |||| || || |||||| || ||||||| |||||
Sbjct 1523 TACGATGCCTTATCGGA-GAAAGATAAATCGTTATTCCTTCATCTAACTTGCTTTTTCAA 1581
Query 1485 TCGT-G-AATGGATTGTGAA-AGTGGAAGAGTATCTTGC-AGAGACGTTCTTGGA-TGTG 1539
| | | || | |||| ||| | | |||| |||||||| | ||||||||| ||| | |
Sbjct 1582 -CTTTGGAA-GTATTGAGAATA-TAGAAGTTTATCTTGCCA-AGACGTTCTCGGACT-TC 1636
Query 1540 AGTCATCGGCTTAATGGCTTAGCTGAAAAATCGCTCATATC 1580
|| || |||||| || ||||| ||| | || ||||||||
Sbjct 1637 AGGCAACGGCTTGATCTCTTAGTTGAGAGATTTCTCATATC 1677
Score = 233 bits (126), Expect = 8e-60
Identities = 347/452 (77%), Gaps = 22/452 (5%)
Strand=Plus/Plus
Query 181 TGGACACACCATGTGTTTCCAAGTTTTCGA-GGGGAAGATGTCCGTAGAGA-C-TTTCTT 237
|||| |||| |||| || || || ||| | || | ||||||||| | | | | |||||
Sbjct 141 TGGATACACGATGTCTTCCCGAG-CTTCCACGGTGCAGATGTCCGCA-A-ATCGTTTCTG 197
Query 238 AGTCACATTCAGATGGAGTTTCA-AAG-AATGGGAATCACAC-CATTCATTGATAATGAG 294
||||||| || || |||| ||| ||| || || ||| || |||||||||||||||
Sbjct 198 AGTCACACTCTGAAGGAG-CTCAGAAGCAA-AGGTATC-GACTTATTCATTGATAATGAT 254
Query 295 ATCGAGAGAGGACAATCCATCGGTCCTGAACTCATTCGAGCAATTAGA-GAATCCAAGAT 353
||| ||||||| ||| ||||| ||||| |||| ||| | | | | ||| | | |
Sbjct 255 ATCTTGAGAGGAGAATTTATCGGCCCTGAGCTCAAAAAAGCGA-TCCATGGATCGAGGCT 313
Query 354 CGCAATTATCTTGCTGTC-AAGAA-ACTACGCTTCTTCGAGC-TGGTGTCTTGACGAATT 410
||| ||| ||||||| || || || | |||||||||||| | |||||||||||||||||
Sbjct 314 CGCGATTGTCTTGCTCTCGAA-AAGA-TACGCTTCTTCG-TCGTGGTGTCTTGACGAATT 370
Query 411 GGCGGAGATTATGAAGTGCAGGGAAGAATTGGGTCAAACAGTTTTGGCTGTTTTCTATAA 470
|||||||||||||||||||| ||||| || ||||||||||| |||| ||||||| |
Sbjct 371 GGCGGAGATTATGAAGTGCAAGGAAGCTTTTGGTCAAACAGTGATGGCCATTTTCTACGA 430
Query 471 AGTGGATCCATCTGATGTAAAGAAGCTGACCGGAGATTTTGGAAAAGTCTTCaaaaaaaC 530
|||||||||| |||||||| |||||| |||||||| |||||| ||||||||| | ||||
Sbjct 431 AGTGGATCCAACTGATGTAGAGAAGCAGACCGGAGGTTTTGGGGAAGTCTTCACAGAAAC 490
Query 531 ATGTGCCGGTAAAACAAAAGAGCACGTTGGGAGATGGAGACAAGCT-TTGGCAAATGTCG 589
|||| ||||||||| ||| || ||| || |||||| |||||| ||| |||| || |
Sbjct 491 TTGTGAGGGTAAAACAGCTGAGGACATTGAGAAATGGAGTCAAGCTCTTG-CAAAAGTGG 549
Query 590 CCACAATCGCCGGTTACCATTCGACCAACTGG 621
| || || | |||||| ||| | || ||||
Sbjct 550 CAACTGTCACTAGTTACCTTTCAAGCAGCTGG 581
> AT3G44630.3 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16195984-16200595 FORWARD LENGTH=4031
Length=4031
Score = 394 bits (213), Expect = 3e-108
Identities = 577/748 (77%), Gaps = 44/748 (6%)
Strand=Plus/Plus
Query 2707 TGCTCAAATCTGGTAAAGCTCCCCTT-TTCTATTGGAAACCTTCAGAAGTTGCAAAAGTT 2765
|||||||||||||| |||| |||| |||||||||||||||||| || ||| | |||
Sbjct 2722 TGCTCAAATCTGGTGGAGCT-TCCTTCTTCTATTGGAAACCTTCAAAAATTGTTTATGTT 2780
Query 2766 GA-CCTTACGAGGATGCTCTAAGCTAGAAGA-TCTTCCAGCCAACATCAAATTGGGATCT 2823
|| | | |||||||||| ||||||||| | ||||||| | |||||||| ||| ||||
Sbjct 2781 GAGAATGA-GAGGATGCTCAAAGCTAGAA-ACTCTTCCAACAAACATCAACTTGATATCT 2838
Query 2824 CTTTGCT-TACTTGATCTCACTGATTGCTTGCTGTTGAAAAGGTTTCCTGAGATCTCCAC 2882
|| | | ||||||||||||| ||||||| || ||||||||| ||||| |||||||||||
Sbjct 2839 CTCCG-TATACTTGATCTCACAGATTGCTCGCAGTTGAAAAGTTTTCCCGAGATCTCCAC 2897
Query 2883 AAACGTTGAATTTCTCTA--TCTCAAAGGAACCACAATAGAAGAAGTCCCTTCATCAATC 2940
| || || | ||| | | | |||||||| ||||| ||||||| |||| || |||
Sbjct 2898 ACACATTTCAGAGCTC-AGGT-TAAAAGGAACTGCAATAAAAGAAGTTCCTTTGTCGATC 2955
Query 2941 AAATCTTGGTCTCGTCTCACT-AAGT-TGCATATGTCATACAGTGAAAATCTCAA-GAAC 2997
| || ||||||||||| || | | || | ||||||||| ||||| || || |||
Sbjct 2956 ACGTCGTGGTCTCGTCTTGCTGTA-TATG-AAATGTCATACTTTGAAAGCCTTAAGGAA- 3012
Query 2998 TTTCCTCATGCTTTTGACATCATCACAGTGCTGCAAGTGACCAA-T-ACAGAAATACAAG 3055
|| || |||||| ||||||||||||| | || | || || | | ||| |||||||
Sbjct 3013 TTCCCGCATGCTCTTGACATCATCACCGACCTACTTTTG-GTAAGTGA-AGATATACAAG 3070
Query 3056 -AGTTTCCCCCATGGGTCAACA-AATTCTCTCGTTTAACAGTACTC--ATACTCAAGGGA 3111
|| |||| ||||||||||| | || | |||||||| || || ||| | |||||| |
Sbjct 3071 AAG-TTCCTCCATGGGTCAAGAGAA-TGTCTCGTTT-AC-GTGCTCTTAGACTCAA-CAA 3125
Query 3112 -TGCAAAAAG-CTGGTATCACTCCAACAGA-TTCCAGATTCCCTCT-CTTACATAGATGC 3167
||| || || ||||||||||||| ||| | ||||||||||||| | ||||||| ||||
Sbjct 3126 CTGC-AATAGTCTGGTATCACTCCCACA-ACTTCCAGATTCCCT-TGATTACATATATGC 3182
Query 3168 AGA-AGATTGTGAGTCCCTGGAGAGACTAGATTGCTCCTTTCAGGATCCAAATATTTGGC 3226
||| | ||||| ||||||| |||||||| ||||| | |||| | ||||| | || | |
Sbjct 3183 AGATA-ATTGTAAGTCCCTCGAGAGACTGGATTGTTGCTTTAACAATCCAGAGATCCGTC 3241
Query 3227 TCAAATTT-TCTAAGTGCTTCAAACTGAATCAAGAAGCCAGAGACCTCATTATCCAGACA 3285
|| |||| | || ||||||||||||||||||||||||||||| ||||| || || |||
Sbjct 3242 TC-TATTTCCCCAAATGCTTCAAACTGAATCAAGAAGCCAGAGATCTCATCATGCACACA 3300
Query 3286 CCGACTAGTAAATATGCGGTCTTACCCGGCAGAGAAGTGCCTGCATACTTCACTCACCAA 3345
| ||| ||||||||||| | ||||| | | | |||||||||| | ||||| ||||| |
Sbjct 3301 TCAACTCGTAAATATGCGATGTTACCAAGTATACAAGTGCCTGCCTGCTTCAATCACCGA 3360
Query 3346 TCTACTACTGGAGG-TTCCTTGACAATCAAGCTGAACGAGAAGCCTCTTCCTACATCCAT 3404
||||| |||| || || ||||| ||||||| |||| ||| | ||||||||||| || |
Sbjct 3361 GCTACTTCTGG-GGATTACTTGAAAATCAAGTTGAAGGAGTCGTCTCTTCCTACAACCTT 3419
Query 3405 GAGGTTTAAGGCTTGCATTTTGCTGGTT 3432
||| ||||||||||| || |||| |||
Sbjct 3420 GAGATTTAAGGCTTGTATCATGCTTGTT 3447
> AT3G44480.1 | Symbols: RPP1, cog1 | Disease resistance protein
(TIR-NBS-LRR class) family | chr3:16090564-16096359 REVERSE
LENGTH=4038
Length=4038
Score = 363 bits (196), Expect = 9e-99
Identities = 674/896 (75%), Gaps = 67/896 (7%)
Strand=Plus/Plus
Query 2566 TCAAGTCTGGTGGAGCTCCCTTC-CTCTATTGGGAATCT--CATC-AATCTAAAAG-AAT 2620
|||||||| | |||||||| || |||||| |||| || || | ||||| ||| |||
Sbjct 2522 TCAAGTCTAATAGAGCTCCC-TCTTTCTATT-GGAA-CTGCCA-CAAATCT-GAAGCAAT 2576
Query 2621 TGGATCTTAGCAGTTTATCATGTCTAGTGGAGCTCCCTTTCTGGATTGGAAATGCCACCA 2680
|| || ||||| | | ||| |||| ||| | ||||| | || |||||| || |||
Sbjct 2577 TGAATATTAGCGGATGCTCAAGTCTCGTGAAACTCCCATCCTCAATTGGAGATATCACTG 2636
Query 2681 ACCTTGAGGT-TTTAAACCTTGA-CCAA-TGCTCAAATCTGGTAAAGCTCCCCTT-TTCT 2736
| || || || ||| | | | | | || ||||||| |||||| | ||| |||| |||
Sbjct 2637 ATCTCGAAGTGTTT-GATC-T-ATCTAACTGCTCAAGTCTGGTGACGCT-TCCTTCCTCT 2692
Query 2737 ATTGGAAACCTTCAGAAGTTGCAAAAGTTGACCTTA--CGAGGATGCTCTAAGCTAGAAG 2794
|| ||||||||||| || ||| ||||| | ||| |||||||||| |||||||| |
Sbjct 2693 ATAGGAAACCTTCAAAACTTGTGCAAGTT-A-ATTATGAGAGGATGCTCAAAGCTAGAGG 2750
Query 2795 ATCTTCCAGCCAACATCAAATTGGGATCTCTTTGCT-TACTTGATCTCACTGATTGCT-T 2852
||||||| ||||||||| ||| ||||| | | | |||| ||||||| ||||||| |
Sbjct 2751 CTCTTCCAATCAACATCAACTTGAAATCTC-TCGATACACTTAATCTCACAGATTGCTCT 2809
Query 2853 GCTGTTGAAAAGGTTTCCTGAGATCTCCACAAACGTTGAATTTCTCTA--TCTCAAAGGA 2910
| ||||||||| |||||||||||||||||| || || | ||| | | | ||||||
Sbjct 2810 -CAGTTGAAAAGTTTTCCTGAGATCTCCACACACATTTCAGAGCTC-AGGT-TAAAAGGA 2866
Query 2911 ACCACAATAGAAGAAG-TCCCTTCATCAATCAAATCTTGGTCTCGTCTCACTAAGTTGCA 2969
|| ||||| |||||| |||||| || |||| || ||||||| ||| || | || ||
Sbjct 2867 ACTGCAATAAAAGAAGTTCCCTT-GTCGATCATGTCGTGGTCTCCTCTTGCTGACTTTCA 2925
Query 2970 TATGTCATACAGTGAAAATCTCA-AGAACTTTCCTCATGCTTTTGACATCATCACAG-TG 3027
|| |||||| ||||| |||| ||| || || |||||||||||||||||||| | |
Sbjct 2926 GATTTCATACTTTGAAAGCCTCATGGAA-TTCCCGCATGCTTTTGACATCATCAC-GAAG 2983
Query 3028 CTGCAAGTGACCAATACAGAAATACAAG-AGTTTCCCCCATGGGTCAACA-AATTCTCTC 3085
||||| ||| | | | ||| ||||||| || |||| ||||||||||| | || | ||||
Sbjct 2984 CTGCATTTGAGC-A-A-AGATATACAAGAAG-TTCCTCCATGGGTCAAGAGAA-TGTCTC 3038
Query 3086 GTTTAACAGT-ACTCATA--CTCAAGGGA-TGCAAAAAGCTGGTATCACTCCAACAGA-T 3140
|||| || || | || || ||||| | ||||| || ||||||||||||| || | |
Sbjct 3039 GTTT-AC-GTGA-TCTTAGTCTCAA-CAACTGCAATAATCTGGTATCACTCCCCCA-ACT 3093
Query 3141 TCCAGATTCCCTCT-CTTACATAGATGCAGA-AGATTGTGAGTCCCTGGAGAGACTAGAT 3198
| |||||||||| | ||||||| ||||||| | ||||| ||||||| |||||||| |||
Sbjct 3094 TTCAGATTCCCT-TGATTACATATATGCAGATA-ATTGTAAGTCCCTCGAGAGACTGGAT 3151
Query 3199 TGCTCCTTTCAGGATCCAAATATTTGGCTCAAATTT-TCTAAGTGCTTCAAACTGAATCA 3257
|| | |||| | ||||| | || | ||| |||| | || |||||||||||||||||
Sbjct 3152 TGTTGCTTTAACAATCCAGAGATCCGTCTC-TATTTCCCCAAATGCTTCAAACTGAATCA 3210
Query 3258 AGAAGCCAGAGACCTCATTATCCAGACACCGACTAGTAAATATGCGGTCTTACCCGGCAG 3317
|||||||||||| ||||| || | ||| ||| ||| | ||||| | || || || |
Sbjct 3211 AGAAGCCAGAGATCTCATCAT---G-CAC--ACTTGTATAGATGCGATGTTTCCAGGTAC 3264
Query 3318 AGAAGTGCCTGCATACTTCACTCACCAATCTACTACTGGAGG-TTCCTTGACAATCAAGC 3376
| |||||||||| | ||||| ||| | | ||||| |||| || |||||||| |||||||
Sbjct 3265 ACAAGTGCCTGCCTGCTTCATTCATCGAGCTACTTCTGG-GGATTCCTTGAAAATCAAGT 3323
Query 3377 TGAACGAGAAGCCTCTTCCTACATCCATGAGGTTTAAGGCTTGCATTTTGCTGGTT 3432
|||| ||| ||||||||||||| || |||| ||||||||||| || |||| |||
Sbjct 3324 TGAAGGAGTCGCCTCTTCCTACAACCTTGAGATTTAAGGCTTGTATCATGCTTGTT 3379
> AT3G44400.1 | Symbols: | Disease resistance protein (TIR-NBS-LRR
class) family | chr3:16045954-16049668 REVERSE LENGTH=3314
Length=3314
Score = 248 bits (134), Expect = 3e-64
Identities = 469/623 (75%), Gaps = 54/623 (9%)
Strand=Plus/Plus
Query 3065 CATGGGTCAACA-AATTCTCTCGTTTAAC-AGTACTCATACTCAAGGGA-TGCAAAAAGC 3121
|||||||||| | || | |||||||| || || || | |||||| | ||||| || |
Sbjct 2414 CATGGGTCAAGAGAA-TGTCTCGTTT-ACGTGTTCTGACACTCAA-CAACTGCAATAATC 2470
Query 3122 TGGTATCACTCCAACAGA-TTCCAGATTCCCTCT-CTTACATAGATGCAGA-AGATTGTG 3178
|||||||||||| || | ||||||| ||||| | ||||||| ||||||| | |||||
Sbjct 2471 TGGTATCACTCCCCCA-ACTTCCAGACTCCCT-TGATTACATATATGCAGATA-ATTGTA 2527
Query 3179 AGTCCCTGGAGAGACTAGATTGCTCCTTTCAGGATCCAAATATTTGGCTCAAATTTT-CT 3237
||||||| |||||||| || || | |||| | ||||| | ||| | || | ||||| |
Sbjct 2528 AGTCCCTCGAGAGACTGGACTGTTGCTTTAACAATCCAGAGATTAGTCT-ATATTTTCCC 2586
Query 3238 AAGTGCTTCAAACTGAATCAAGAAGCCAGAGACCTCATTATCCAGACACCGACTAGTAAA 3297
|| ||||||||||||||||||||||||||||| ||||| || || ||| ||||| || |
Sbjct 2587 AATTGCTTCAAACTGAATCAAGAAGCCAGAGATCTCATCATGCACACATCGACTTCTAGA 2646
Query 3298 TATGCGGTCTTACCCGGCAGAGAAGTGCCTGCATACTTCACTCACCAATCTACTACTGGA 3357
| |||| | |||||||| | | |||||||||| | ||||| ||||| | ||||| ||||
Sbjct 2647 TTTGCGATGTTACCCGGTACACAAGTGCCTGCCTGCTTCATTCACCGAGCTACTTCTGG- 2705
Query 3358 GG-TTCCTTGACAATCAAGCTGAACGAGAAGCCTCTTCCTACATCCATGAGGTTTAAGGC 3416
|| || ||||| ||||||| |||| ||| |||| |||||||| || |||| ||||||||
Sbjct 2706 GGATTACTTGAAAATCAAGTTGAAGGAGTCGCCTTTTCCTACAACCTTGAGATTTAAGGC 2765
Query 3417 TTGCAT--T--TTGCT--GGTTCAT-AA-A---G-GTGATGATGAG-GCTCG-TGAT-GA 3461
||| || | ||| | |||| || || | | || ||||| || | ||| ||| |
Sbjct 2766 TTGTATCATGCTTGTTAAGGTTAATGAAGAAATGAGTTATGATCAGAGATCGATGAGCGT 2825
Query 3462 TGAAAACTGG-ATG-GATGGA-A--ATGGCTTTTACACTGTT-AGTTGTaaaaaaaG-TG 3514
||| | || || | || | | | | || | | | ||| ||| ||| | ||| |
Sbjct 2826 TGACAT-TGTCATCAG-TGTACACCAAG-CTATCAAA--GTTCAGT-GTACACCAAGCT- 2878
Query 3515 AGCATCATTTATATCCAGTTTTAGCAGAGCATGTGTACGTATTTGAAGTCGAAGCAGATG 3574
| |||||| |||||||||||||| |||||||| | ||| ||||||| | |||| ||| |
Sbjct 2879 ATCATCATATATATCCAGTTTTAACAGAGCATATATACACATTTGAACTTGAAGTAGAGG 2938
Query 3575 ---TGACTTCCACCGAGCTTGTCTTTGAGTTCA-A--ATTCGGCAAACCGAATTGGAAGA 3628
|||||||||| ||||||||||||||||||| | |||| | || | ||||||||||
Sbjct 2939 AGGTGACTTCCACGGAGCTTGTCTTTGAGTTCATATCATTCAG-AAGC--AATTGGAAGA 2995
Query 3629 TAAAAGAATGTGGGGTATTCCAA 3651
|| |||||| ||| || |||||
Sbjct 2996 TAGGAGAATGCGGGATACTCCAA 3018
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 182708006406
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5