BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg916065 Length=1398 Score E Sequences producing significant alignments: (Bits) Value AT5G42650.1 | Symbols: AOS, CYP74A, DDE2 | allene oxide synthas... 1474 0.0 > AT5G42650.1 | Symbols: AOS, CYP74A, DDE2 | allene oxide synthase | chr5:17097595-17099395 REVERSE LENGTH=1801 Length=1801 Score = 1474 bits (798), Expect = 0.0 Identities = 881/921 (96%), Gaps = 6/921 (1%) Strand=Plus/Plus Query 481 GACGGAACCGCCTGTAATTTCTTGGCTCGAGCTTTCTACGGGACGAATCCCGTAGATACA 540 ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 676 GACGGAACCGCCTTTAATTTCTTGGCTCGAGCTTTCTACGGGACGAATCCCGCAGATACA 735 Query 541 AAGCTCAAAGCCGACGCGCCCGGTTTGATCACTAAATGGGTTTTATTCAATCTCCATCCG 600 ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 736 AAGCTCAAAGCCGACGCTCCGGGTTTGATCACTAAATGGGTTTTATTCAATCTCCATCCA 795 Query 601 TTACTCTCTCTCGGTTTACCAAGAATTGTAGAAGATCCTCTCCTCCATACATTTAGTCTA 660 ||||||||| | |||||||| ||| || ||||||| |||||| ||||||||||||||||| Sbjct 796 TTACTCTCTATTGGTTTACCGAGAGTTATAGAAGAACCTCTCATCCATACATTTAGTCTA 855 Query 661 CCACCGGCGTTAGTCAAATCTGATTACCAGAGACTCTACGAGTTTTTC-TACGAATCCGC 719 |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 856 CCACCGGCGTTAGTCAAATCTGATTACCAGAGACTCTACGAGTTTTTCTTA-GAATCCGC 914 Query 720 CGGTGAAATTCTCGTTGAAGCCGATAAATTGGGTATCTCACGAGAAGAAGCGACTCACAA 779 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 915 CGGTGAGATTCTCGTTGAAGCCGATAAATTGGGTATCTCACGAGAAGAAGCTACTCACAA 974 Query 780 TCTTCTCTTCGCCACGTGCTTCAACACGTGGGGTGGGATGAAGATCCTT-TTCCCGAATA 838 ||||||||||||||||||||||||||||||||||||||||||||| || || ||||||| Sbjct 975 TCTTCTCTTCGCCACGTGCTTCAACACGTGGGGTGGGATGAAGAT-TTTGTTTCCGAATA 1033 Query 839 TGGTTAAACGGATCGGGCGGGCGGGTCATAAAGTCCATAATCAG-TTAGCGGAGGAGATT 897 |||||||||| |||||||||||||||||| |||| ||||| | | ||||||||||||||| Sbjct 1034 TGGTTAAACGTATCGGGCGGGCGGGTCATCAAGTTCATAA-CCGATTAGCGGAGGAGATT 1092 Query 898 AGATCTGTGATTAAATCCAACGGTGGAGAACTCACGATGGGAGGGATTGAGAAAATGGAG 957 ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct 1093 AGATCTGTGATTAAATCCAACGGCGGAGAACTCACGATGGGAGCGATTGAGAAAATGGAG 1152 Query 958 TTAACCAAATCTGTGGTTTACGAATGTCTCCGGTTTGAACCACCGGTTCCGGCGCAATAC 1017 ||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct 1153 TTAACCAAATCAGTGGTTTACGAATGTCTCCGGTTTGAACCACCGGTTACGGCTCAATAC 1212 Query 1018 GGTAGAGCGAAGAAAGATCTGGTTATCGAAAGCCACGACGCGGCGTTTAAAGTCAAAGCC 1077 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1213 GGTAGAGCGAAGAAGGATCTGGTTATCGAAAGCCACGACGCGGCGTTTAAAGTCAAAGCC 1272 Query 1078 GGTGAAATGCTTTACGGTTATCAACCGTTGGCGACGAGAGATCCGAAGATTTTTGATAGA 1137 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1273 GGTGAAATGCTTTACGGTTATCAACCGTTGGCGACGAGAGATCCGAAGATTTTTGATCGG 1332 Query 1138 GCGGATGAGTTTGTGCCGGAGAGATTCGTCGGAGAAGAAGGAGAGAAGCTGTTGCGGCAT 1197 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 1333 GCGGATGAGTTTGTGCCGGAGAGATTCGTCGGAGAAGAAGGAGAGAAGCTTTTGAGGCAT 1392 Query 1198 GTGTTGTGGTCGAATGGACCGGAGACGGAGACTCCGACGGTGGGGAATAAACAATGCGCC 1257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1393 GTGTTGTGGTCGAATGGACCGGAGACGGAGACTCCGACGGTGGGGAATAAACAATGCGCC 1452 Query 1258 GGTAAGGATTTCGTTGTTTTGGTGGCGAGGTTGTTTGTGATTGAGATTTTCCGGCGATAT 1317 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1453 GGTAAGGATTTTGTTGTTTTGGTGGCGAGGTTGTTTGTGATTGAGATTTTCCGGCGATAT 1512 Query 1318 GATTCGTTTGATATTGAGGTTGCTAAGTCGCCGTTAGGAAGCTCCGTTAATTTCACGTCG 1377 |||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| Sbjct 1513 GATTCGTTTGATATTGAGGTTGGTACGTCGCCGTTAGGAAGCTCCGTTAATTTCTCGTCG 1572 Query 1378 TTAAGGAAAGCTAGCTTTTAG 1398 ||||||||||||||||||||| Sbjct 1573 TTAAGGAAAGCTAGCTTTTAG 1593 Score = 726 bits (393), Expect = 0.0 Identities = 451/479 (94%), Gaps = 3/479 (1%) Strand=Plus/Plus Query 1 ATGGCTTCTGTTTCAACTCCTTTTCCGATTTCTCTCCACCCAAAGATCGTACGATCAAAG 60 ||||||||| ||||||| |||||||||||||||||||||||||| | ||||||||||||| Sbjct 37 ATGGCTTCTATTTCAACCCCTTTTCCGATTTCTCTCCACCCAAAAACCGTACGATCAAAG 96 Query 61 CCGTTGAAATTTCGAGTTTTGACCCGTCCGATCAAAGCTTCCGGGTCAGAAACACCTCCT 120 ||||||||||| ||||||||||||||||||||||||||||||||||||| || | ||||| Sbjct 97 CCGTTGAAATTCCGAGTTTTGACCCGTCCGATCAAAGCTTCCGGGTCAG-AA-A-CTCCT 153 Query 121 GATCTAGCCGTAGCGACACGAACCGGATCTAAAGATCTCCCGATCCGGAACATACCGGGA 180 |||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 154 GATCTAACCGTAGCGACACGAACCGGATCCAAAGATCTCCCGATCCGAAACATACCGGGA 213 Query 181 AACTACGGTTTACCAATCGTTGGACCAATCAAAGACCGTTGGGATTACTTTTACGACCAA 240 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 214 AACTACGGTTTACCAATCGTAGGACCAATCAAAGACCGTTGGGATTACTTTTACGACCAA 273 Query 241 GGAGCTGAAGAGTTCTTCAAATCAAGAATCCGTAAATACAATTCAACCGTGTACCGAGTC 300 |||||||||||||||||||||||| |||||||||||||||| || || |||||| ||||| Sbjct 274 GGAGCTGAAGAGTTCTTCAAATCACGAATCCGTAAATACAACTCCACGGTGTACAGAGTC 333 Query 301 AACATGCCACCGGGAGGTTTTATCGCCGAGAATCCACAAGTTGTGGCTTTACTCGACGGT 360 |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct 334 AACATGCCACCGGGAGCTTTTATCGCCGAGAATCCACAAGTCGTGGCTTTACTCGACGGT 393 Query 361 AAAAGCTTCCCGGTTTTATTCGATGTCGATAAAGTCGAAAAGAAAGATCTCTTCACCGGT 420 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 394 AAAAGCTTCCCGGTTTTATTCGATGTCGATAAAGTCGAAAAGAAAGATCTTTTCACCGGT 453 Query 421 ACTTACATGCCTTCAACAGACCTCACTGGCGGTTACCGTATCCTCTCTTACCTCGATCC 479 ||||||||||| ||||| || || || || || |||||||||||||| ||||||||||| Sbjct 454 ACTTACATGCCGTCAACGGAACTAACCGGAGGCTACCGTATCCTCTCGTACCTCGATCC 512 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 68875147740 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5